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The map label for this gene is 66046860

Identifier: 66046860

GI number: 66046860

Start: 4313132

End: 4313614

Strand: Direct

Name: 66046860

Synonym: Psyr_3631

Alternate gene names: NA

Gene position: 4313132-4313614 (Clockwise)

Preceding gene: 66046859

Following gene: 66046861

Centisome position: 70.78

GC content: 56.11

Gene sequence:

>483_bases
ATGAACAAACAGGATGTACTGCAACGGATCATCGACAAGCTGAACATCGATCTGGATATCGCCGAACGAGCGGCGCAAAC
CGCCTACGAAACGGCTACCCACGAAGAGAACATCGCTGAGAACAAGTACGACACGCTAGGACTGGAGGCGTCTTATCTGG
CAGCTGGCCAGGCACGCCGCGTCGAGGAGATTCGTCAGTCGCTGACGCTTTATCGGAAATGGTCGCTCAAGCCATTCGAT
GAATCGCGCGGTATTCAGACCGGTGATCTGGTGGTTGTCGAAGATGCGAGCGGGCAGACGCACTATCTGTTCCTCGGCCC
CGATGCTGCCGGCCTGAAGGTCAGTGCAGGGGATCATCTGGTCACCGTCATTACCGCCAGAGCCCCGCTCGGGCAGAACC
TGCTGGGCAAATTCGAAGACGATGCTGTACAGATTGTCATCAACGGCAGCGGACAATCCTACGAGATAACGCAAACGTTG
TGA

Upstream 100 bases:

>100_bases
CACCTTCAACCGCTCGAAATGTGATTTCTGGATACAGCAGGATCGCACCGCGCCGAGCGAAAAAAGCCGTGCCAGCATCA
ATCAGTACTGCGGATAAACC

Downstream 100 bases:

>100_bases
CACACCCGGCATCTGCAGGGTTGATCGCATCAAGTTTTTGTGGGTAAGGTGAACCGTCGCCATCACCACCGCAACCGGGG
CAACATCAAAGCAAACAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: Transcription Elongation Factor; Transcriptional Elongation Factor

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MNKQDVLQRIIDKLNIDLDIAERAAQTAYETATHEENIAENKYDTLGLEASYLAAGQARRVEEIRQSLTLYRKWSLKPFD
ESRGIQTGDLVVVEDASGQTHYLFLGPDAAGLKVSAGDHLVTVITARAPLGQNLLGKFEDDAVQIVINGSGQSYEITQTL

Sequences:

>Translated_160_residues
MNKQDVLQRIIDKLNIDLDIAERAAQTAYETATHEENIAENKYDTLGLEASYLAAGQARRVEEIRQSLTLYRKWSLKPFD
ESRGIQTGDLVVVEDASGQTHYLFLGPDAAGLKVSAGDHLVTVITARAPLGQNLLGKFEDDAVQIVINGSGQSYEITQTL
>Mature_160_residues
MNKQDVLQRIIDKLNIDLDIAERAAQTAYETATHEENIAENKYDTLGLEASYLAAGQARRVEEIRQSLTLYRKWSLKPFD
ESRGIQTGDLVVVEDASGQTHYLFLGPDAAGLKVSAGDHLVTVITARAPLGQNLLGKFEDDAVQIVINGSGQSYEITQTL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17605; Mature: 17605

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKQDVLQRIIDKLNIDLDIAERAAQTAYETATHEENIAENKYDTLGLEASYLAAGQARR
CCHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHCCCHHH
VEEIRQSLTLYRKWSLKPFDESRGIQTGDLVVVEDASGQTHYLFLGPDAAGLKVSAGDHL
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCEEEECCCEE
VTVITARAPLGQNLLGKFEDDAVQIVINGSGQSYEITQTL
EEEEEECCCCCCHHHCCCCCCEEEEEEECCCCEEEEEECC
>Mature Secondary Structure
MNKQDVLQRIIDKLNIDLDIAERAAQTAYETATHEENIAENKYDTLGLEASYLAAGQARR
CCHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHCCCHHH
VEEIRQSLTLYRKWSLKPFDESRGIQTGDLVVVEDASGQTHYLFLGPDAAGLKVSAGDHL
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCEEEECCCEE
VTVITARAPLGQNLLGKFEDDAVQIVINGSGQSYEITQTL
EEEEEECCCCCCHHHCCCCCCEEEEEEECCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA