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The map label for this gene is speE [H]

Identifier: 66046850

GI number: 66046850

Start: 4305167

End: 4305928

Strand: Reverse

Name: speE [H]

Synonym: Psyr_3621

Alternate gene names: 66046850

Gene position: 4305928-4305167 (Counterclockwise)

Preceding gene: 66046852

Following gene: 66046849

Centisome position: 70.66

GC content: 62.86

Gene sequence:

>762_bases
ATGACGGAAGAGCGTGAGCGCGTAGAGCGAATCCTGGCCGAGGTGCACGACGACTTCGGCATGATTCGCGTGCTGGAAGT
GGAGGATTACCGCTTTCTGGAGTTTGGCGATGCCATCGAGCAAAGCTGCACCTTTACAGCCGATCCGAGCTGGCTGGAGT
ACGACTACACCCGCGCGATGCTGATCGGCGCGCTGTGCCATGACGCGCCGGAAAGCGCGCTGTTTCTGGGCCTGGGGGCC
GGTACGCTGACTCAGGCCTGCATGAAGTTCCTGCCCCTCGAGGATGTGGAAGTCATCGAGCTGCGCCCGGATGTGCCACG
TCTGGCCATGGAGTTCATGGGGCTCGACGACGATCCGCGACTGTATATCCGCATCGGCGATGCGCTGGACCTGCTGGACA
GTGCCGAGCCTGCCGACCTGATCTTTGTCGACCTGTACACCGATGTCGGGCCTGGGGTCGGGCACCTGGCCTGGAATTTC
CTGCAGAGCTGTCAGCAGCGGCTGAATCCGGGCGGCTGGCTGATCATCAATCAGTGGGCGACCGACGACGGCAAGCCGCT
GGGAGCGGCGCTGCTGCGTGGCCTTTACCACCGCCATTACTGGGAGCTGCCGGTGAAGGAGGGCAACGTCATCCTGCTCG
TCCCGGCCGACCTGGAGCAGACACTGGATATCGACGCGTTGAACGGACGAGCCGAGGCACTTGCGCCGCATCTGGGTTAC
TCGCTTGCGTCGCTGATCAAGGCTATTCGTTCCGCCACCTGA

Upstream 100 bases:

>100_bases
GGAGCATTGGAGCGACGCCGTACGCCACAACGTGTGACAAAGCCGTGCGCTTGCCCGACAATTCGTATTTTGCGCTCGGC
GCAGACAACCAGGAACGGTG

Downstream 100 bases:

>100_bases
GTAGGTGACAGCTGAGTCGATTGTGCTGAAAACGGGGTGAGACAATTCGCCACACCTCGAAGGCCAGGATGCCGGTCATG
TGCAAGAATAGATTAAACGT

Product: hypothetical protein

Products: NA

Alternate protein names: Putrescine aminopropyltransferase; PAPT; SPDSY [H]

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MTEERERVERILAEVHDDFGMIRVLEVEDYRFLEFGDAIEQSCTFTADPSWLEYDYTRAMLIGALCHDAPESALFLGLGA
GTLTQACMKFLPLEDVEVIELRPDVPRLAMEFMGLDDDPRLYIRIGDALDLLDSAEPADLIFVDLYTDVGPGVGHLAWNF
LQSCQQRLNPGGWLIINQWATDDGKPLGAALLRGLYHRHYWELPVKEGNVILLVPADLEQTLDIDALNGRAEALAPHLGY
SLASLIKAIRSAT

Sequences:

>Translated_253_residues
MTEERERVERILAEVHDDFGMIRVLEVEDYRFLEFGDAIEQSCTFTADPSWLEYDYTRAMLIGALCHDAPESALFLGLGA
GTLTQACMKFLPLEDVEVIELRPDVPRLAMEFMGLDDDPRLYIRIGDALDLLDSAEPADLIFVDLYTDVGPGVGHLAWNF
LQSCQQRLNPGGWLIINQWATDDGKPLGAALLRGLYHRHYWELPVKEGNVILLVPADLEQTLDIDALNGRAEALAPHLGY
SLASLIKAIRSAT
>Mature_252_residues
TEERERVERILAEVHDDFGMIRVLEVEDYRFLEFGDAIEQSCTFTADPSWLEYDYTRAMLIGALCHDAPESALFLGLGAG
TLTQACMKFLPLEDVEVIELRPDVPRLAMEFMGLDDDPRLYIRIGDALDLLDSAEPADLIFVDLYTDVGPGVGHLAWNFL
QSCQQRLNPGGWLIINQWATDDGKPLGAALLRGLYHRHYWELPVKEGNVILLVPADLEQTLDIDALNGRAEALAPHLGYS
LASLIKAIRSAT

Specific function: Catalyzes the production of spermidine from putrescine and decarboxylated S-adenosylmethionine (dcSAM), which serves as an aminopropyl donor [H]

COG id: COG0421

COG function: function code E; Spermidine synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the spermidine/spermine synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001045 [H]

Pfam domain/function: PF01564 Spermine_synth [H]

EC number: =2.5.1.16 [H]

Molecular weight: Translated: 28272; Mature: 28140

Theoretical pI: Translated: 4.15; Mature: 4.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEERERVERILAEVHDDFGMIRVLEVEDYRFLEFGDAIEQSCTFTADPSWLEYDYTRAM
CCCHHHHHHHHHHHHHCCCCEEEEEEECCCEEEHHHHHHHHCCCCCCCCCCCHHHHHHHH
LIGALCHDAPESALFLGLGAGTLTQACMKFLPLEDVEVIELRPDVPRLAMEFMGLDDDPR
HHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHCCCCCCE
LYIRIGDALDLLDSAEPADLIFVDLYTDVGPGVGHLAWNFLQSCQQRLNPGGWLIINQWA
EEEEECCHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECC
TDDGKPLGAALLRGLYHRHYWELPVKEGNVILLVPADLEQTLDIDALNGRAEALAPHLGY
CCCCCCHHHHHHHHHHHHHHEECCCCCCCEEEEECCCCHHHCCCCCCCCCHHHHHHHHHH
SLASLIKAIRSAT
HHHHHHHHHHCCC
>Mature Secondary Structure 
TEERERVERILAEVHDDFGMIRVLEVEDYRFLEFGDAIEQSCTFTADPSWLEYDYTRAM
CCHHHHHHHHHHHHHCCCCEEEEEEECCCEEEHHHHHHHHCCCCCCCCCCCHHHHHHHH
LIGALCHDAPESALFLGLGAGTLTQACMKFLPLEDVEVIELRPDVPRLAMEFMGLDDDPR
HHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHCCCCCCE
LYIRIGDALDLLDSAEPADLIFVDLYTDVGPGVGHLAWNFLQSCQQRLNPGGWLIINQWA
EEEEECCHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECC
TDDGKPLGAALLRGLYHRHYWELPVKEGNVILLVPADLEQTLDIDALNGRAEALAPHLGY
CCCCCCHHHHHHHHHHHHHHEECCCCCCCEEEEECCCCHHHCCCCCCCCCHHHHHHHHHH
SLASLIKAIRSAT
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA