| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is mgtE [H]
Identifier: 66046781
GI number: 66046781
Start: 4230613
End: 4232055
Strand: Reverse
Name: mgtE [H]
Synonym: Psyr_3552
Alternate gene names: 66046781
Gene position: 4232055-4230613 (Counterclockwise)
Preceding gene: 66046783
Following gene: 66046777
Centisome position: 69.45
GC content: 59.18
Gene sequence:
>1443_bases ATGACCGAAAGAGAAGTAAAAAAAACGCAGGAAAGCTTGCAGGATCGCCTGGCTCAGGTTGTCGATCTGCTGCAGCGCCA GCGTATTGTTGAAGACCTGACCCATCGTCAGGAAGGTCAGCATCAGGACCGTGTAGAAAACCTGGTTCACCGGCAGAACC TCGTCGAGTTGCAACGCAAGCTCGAAGACCTTCACTCTGCCGACGTCGCCTATATCCTTGAAGCCTTGCCCCTGGAAGAC CGTCTGACCGTCTGGCAGCTGGTCAAGGCCGATCGCGACGGCGACATTCTTCTTGAAGTATCCGATTCCGTTCGTGAAAC CCTGATCGCCGACATGGACGATCATGAGTTGCTCGCGGCGGCACGGGACATGGACGCCGACGAACTGGCCGACCTTGCTC CCGAGTTGCCCCGCGACGTCGTTCACGAGCTCATGGAAACACTGGATTCACAGCAGCGTGAGCGCGTGCGGTCGGCCCTG TCCTATGACGAGGATCAGGTCGGTGCGCTGATGGACTTCGAGATGGTGACGATCCGTGAGGACGTCAGCCTTGAAGTCGT GCTGCGCTACCTGCGCAGGCTCAAAGAGCTGCCCGGTCACACCGACAAACTGTTCGTAGTCGATTCCGAGGGCGTGCTCA AGGGCGTGCTGCCGATCAAGCGTCTGCTGGTCAATGATCCGGAGAAGCAGGTTGGCGAAGTCATGGCCAACGATCCGGTC AGCTTTCACCCGGAAGACGATGCCTACGATGCGGCACAGGCGTTCGAGCGTTACGACCTTATCTCCACGCCGGTGGTGGA CAAGAACGGCAAGCTGATCGGCCGTCTGACCATCGATGAAATGGTCGACCTGATCCGTGAGGAAAGCGAAAGCGAAGTCC TCAACATGGCGGGTCTGCGTGAAGAAGAAGACATCTTCGCGTCGGTATGGCGTTCGCTGCGCAACCGCTGGGCCTGGCTG GCAGTCAACCTGGTAACCGCGTTTCTGGCCTCGCGTGTGATCGGCCTGTTCGAAGGCTCCATCGAGAAGCTGGTGGCGCT CGCTGCGCTGATGCCTATCGTGGCCGGGATCGGTGGCAACTCAGGTAATCAGACCATCACCATGATCGTGCGCGCGATGG CGCTGGACCAGGTCAATACCGGTAATACCGCGCGATTGCTGCGCAAGGAGCTCGCTGTCGGCCTGATCAACGGCCTGATC TGGGGGGGTGTGATCGGCGTGGTCGCCTACCTGCTTTATGACAGCTGGTCGCTGGGTGTGGTCATGACCGCAGCCATGAC GCTGAATCTGTTGCTGGCAGCGCTGATGGGCGTTTCCATTCCCATGGCGCTTTCCCGCCTGGGACGAGATCCGGCGATGG GGGCAAGCGTCATGATTACGGCGATGACCGACAGCGGCGGCTTCTTCATCTTTCTAGGGCTGGCGACGATCTTTCTGCTC TAA
Upstream 100 bases:
>100_bases CATGGACATACCCAGTCGTTACTCGATAATGTTTTTCAACAATCATGAATTAACTGATTGATCTCCCGGCGTGCCCCGCT GCTGGGAGTGGAGTTCGCCT
Downstream 100 bases:
>100_bases GTCTCGCGACTCTTACAGTCTTTTGAAATAAAAAACCGCCGTGATCAGGCGGTTTTTTTATGCTTCGGCCAAGTCTTCAT GTCGCTGTGTAACACAATAA
Product: divalent cation transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 480; Mature: 479
Protein sequence:
>480_residues MTEREVKKTQESLQDRLAQVVDLLQRQRIVEDLTHRQEGQHQDRVENLVHRQNLVELQRKLEDLHSADVAYILEALPLED RLTVWQLVKADRDGDILLEVSDSVRETLIADMDDHELLAAARDMDADELADLAPELPRDVVHELMETLDSQQRERVRSAL SYDEDQVGALMDFEMVTIREDVSLEVVLRYLRRLKELPGHTDKLFVVDSEGVLKGVLPIKRLLVNDPEKQVGEVMANDPV SFHPEDDAYDAAQAFERYDLISTPVVDKNGKLIGRLTIDEMVDLIREESESEVLNMAGLREEEDIFASVWRSLRNRWAWL AVNLVTAFLASRVIGLFEGSIEKLVALAALMPIVAGIGGNSGNQTITMIVRAMALDQVNTGNTARLLRKELAVGLINGLI WGGVIGVVAYLLYDSWSLGVVMTAAMTLNLLLAALMGVSIPMALSRLGRDPAMGASVMITAMTDSGGFFIFLGLATIFLL
Sequences:
>Translated_480_residues MTEREVKKTQESLQDRLAQVVDLLQRQRIVEDLTHRQEGQHQDRVENLVHRQNLVELQRKLEDLHSADVAYILEALPLED RLTVWQLVKADRDGDILLEVSDSVRETLIADMDDHELLAAARDMDADELADLAPELPRDVVHELMETLDSQQRERVRSAL SYDEDQVGALMDFEMVTIREDVSLEVVLRYLRRLKELPGHTDKLFVVDSEGVLKGVLPIKRLLVNDPEKQVGEVMANDPV SFHPEDDAYDAAQAFERYDLISTPVVDKNGKLIGRLTIDEMVDLIREESESEVLNMAGLREEEDIFASVWRSLRNRWAWL AVNLVTAFLASRVIGLFEGSIEKLVALAALMPIVAGIGGNSGNQTITMIVRAMALDQVNTGNTARLLRKELAVGLINGLI WGGVIGVVAYLLYDSWSLGVVMTAAMTLNLLLAALMGVSIPMALSRLGRDPAMGASVMITAMTDSGGFFIFLGLATIFLL >Mature_479_residues TEREVKKTQESLQDRLAQVVDLLQRQRIVEDLTHRQEGQHQDRVENLVHRQNLVELQRKLEDLHSADVAYILEALPLEDR LTVWQLVKADRDGDILLEVSDSVRETLIADMDDHELLAAARDMDADELADLAPELPRDVVHELMETLDSQQRERVRSALS YDEDQVGALMDFEMVTIREDVSLEVVLRYLRRLKELPGHTDKLFVVDSEGVLKGVLPIKRLLVNDPEKQVGEVMANDPVS FHPEDDAYDAAQAFERYDLISTPVVDKNGKLIGRLTIDEMVDLIREESESEVLNMAGLREEEDIFASVWRSLRNRWAWLA VNLVTAFLASRVIGLFEGSIEKLVALAALMPIVAGIGGNSGNQTITMIVRAMALDQVNTGNTARLLRKELAVGLINGLIW GGVIGVVAYLLYDSWSLGVVMTAAMTLNLLLAALMGVSIPMALSRLGRDPAMGASVMITAMTDSGGFFIFLGLATIFLL
Specific function: Acts as a magnesium transporter [H]
COG id: COG2239
COG function: function code P; Mg/Co/Ni transporter MgtE (contains CBS domain)
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR006668 - InterPro: IPR006667 - InterPro: IPR006669 [H]
Pfam domain/function: PF00571 CBS; PF01769 MgtE; PF03448 MgtE_N [H]
EC number: NA
Molecular weight: Translated: 53503; Mature: 53372
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEREVKKTQESLQDRLAQVVDLLQRQRIVEDLTHRQEGQHQDRVENLVHRQNLVELQRK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LEDLHSADVAYILEALPLEDRLTVWQLVKADRDGDILLEVSDSVRETLIADMDDHELLAA HHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHCCCCCHHHHHH ARDMDADELADLAPELPRDVVHELMETLDSQQRERVRSALSYDEDQVGALMDFEMVTIRE HHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEHHC DVSLEVVLRYLRRLKELPGHTDKLFVVDSEGVLKGVLPIKRLLVNDPEKQVGEVMANDPV CCCHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCC SFHPEDDAYDAAQAFERYDLISTPVVDKNGKLIGRLTIDEMVDLIREESESEVLNMAGLR CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECHHHHHHHHHHCHHHHHHHHHCCC EEEDIFASVWRSLRNRWAWLAVNLVTAFLASRVIGLFEGSIEKLVALAALMPIVAGIGGN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SGNQTITMIVRAMALDQVNTGNTARLLRKELAVGLINGLIWGGVIGVVAYLLYDSWSLGV CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH VMTAAMTLNLLLAALMGVSIPMALSRLGRDPAMGASVMITAMTDSGGFFIFLGLATIFLL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHC >Mature Secondary Structure TEREVKKTQESLQDRLAQVVDLLQRQRIVEDLTHRQEGQHQDRVENLVHRQNLVELQRK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LEDLHSADVAYILEALPLEDRLTVWQLVKADRDGDILLEVSDSVRETLIADMDDHELLAA HHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHCCCCCHHHHHH ARDMDADELADLAPELPRDVVHELMETLDSQQRERVRSALSYDEDQVGALMDFEMVTIRE HHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEHHC DVSLEVVLRYLRRLKELPGHTDKLFVVDSEGVLKGVLPIKRLLVNDPEKQVGEVMANDPV CCCHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCC SFHPEDDAYDAAQAFERYDLISTPVVDKNGKLIGRLTIDEMVDLIREESESEVLNMAGLR CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECHHHHHHHHHHCHHHHHHHHHCCC EEEDIFASVWRSLRNRWAWLAVNLVTAFLASRVIGLFEGSIEKLVALAALMPIVAGIGGN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SGNQTITMIVRAMALDQVNTGNTARLLRKELAVGLINGLIWGGVIGVVAYLLYDSWSLGV CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH VMTAAMTLNLLLAALMGVSIPMALSRLGRDPAMGASVMITAMTDSGGFFIFLGLATIFLL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]