Click here to switch to the map view.

The map label for this gene is mcpB [H]

Identifier: 66046763

GI number: 66046763

Start: 4211791

End: 4213680

Strand: Direct

Name: mcpB [H]

Synonym: Psyr_3534

Alternate gene names: 66046763

Gene position: 4211791-4213680 (Clockwise)

Preceding gene: 66046762

Following gene: 66046764

Centisome position: 69.12

GC content: 59.42

Gene sequence:

>1890_bases
ATGAGAAAATCTTTAAAATTCAGCCATAAAATTCTCTTGGCGGCGTCCCTTGTGGTGATCGCCGCATTCACGCTATTCAC
GTTCTATAACGACTATCTGCAGCGCAATGCGTTGCACGTGCAGCTCAAGGAGAACCTTAACCAGACGAGCGAAAGTACCG
CCGGCAATATCCGTAACTGGCTTTCCGGGCGAATTCTTCTGGTAGAGAACCTGGCGGAAAACGCGTCTTCGCCTCAGTCC
CCGCAAGAGCAGAATCGGGTACTCGGGCAACCCACGCTGATCGCCACCTTCATGAGCATTTATCAGGGCAGAAGCGATGG
CTCCTTCGTCACCCAGCCGCCTGATGACATGTCGGCCGACTACGACCCAAGAACCCGACCGTGGTATGTCGATGCCCTTC
GCGCCGGCAAAACCATCCTGACCGAGCCGTATCTGGACGCCGTGACCAAGGGCCTGGTCGTGACCCTTGCCACACCGATC
AAGGGAGACTCCGGCGTGTCCGGTGTAATTGGCGGCGACCTGAGCCTGGAAATCCTGGTGAAGATGATCAGTTCGCTGCG
GATGCACGGCGACGGATACGCGTTTCTGGTCGACGCGAATGGCCGCATCCTGGTCCATCCGGACACCTCACTGGTGATGA
AGACGCTGGCCGAAGTCTACCCGGCGAACACGCCCAGGCTGTCGCAAGACCTGAGTGAAAGCGAGTATGCCGGCAAGACC
CAGATCCTGACCTTCGCTCACGTGGACGGCCTGCCCTCGGTCAACTGGTACGTCGGCGTAGCAATGGATAAAGACATCGC
CTACGCGGCCCTGGGCGAGTTCAGAAACTCGGCCATCGTGGCCACTGTGATTGCTGTGGTGCTGATCATCCTGCTGCTGG
GCATGCTCCTGAGTGTCCTGCTGCGCCCACTGAACCTGATGGGCCGCGCCATGCACGATATCGCTGCTGGCGAAGGTGAC
CTGACCAAGCGCCTGGTCATCGAGAGCCAGGACGAGTTCGGGCATCTGGGCAATGGTTTCAACCTCTTTGTAGAGCGAAT
CCATGACTCGATGCGTGAAGTCGCCTCCTCCACCGTGCAGCTCAATGAAGTTGCCCTGCGGGTACTGAATGCATCCAACT
CGTCGATGCTTAACTCCGATCAACAGTCACACCGCACCAACAGCGTCGCCGCAGCCATCAATGAGCTGGGCGCCGCAACG
CAGGAGATCGCCCAGAATGCCGCGCGCGCCTCGGGTCACTCCAGCGATGCACGAACGCTGGCGTCGGACGGGCAGGACGT
GGTCGGGCAGAACATCGAGGCCATGAGCCGTCTTTCCAAGCGCATCAGCAGCGCAAGCGGGCAGATCGAAACGCTGAACA
CCAAGACAGCCAACATCGGCCAGATCCTCGACGTGATTACCGGCATCTCGCAGCAGACCAATCTACTGGCCCTCAATGCG
GCCATCGAGGCCGCGCGTGCAGGTGAAGCCGGCAGAGGGTTTGCCGTGGTTGCTGACGAAGTCCGCAGCCTGGCGCACCG
AACGCAGGAATCGGCGAGTCAGGTGCAGGAGATGATCGAGCAACTGCAATCCGGTGCCCGTGAAGCCGTGTCGATCATGA
ACGACAGCCAGCGCGAGAGCGTTGAAACGGTCGGCATTGCCAACAAGGCCGTTGCAAGCCTTGAGCACGTGACCGAACGC
ATTGGCGAAATCGATGGCATGAACCAGTCGGTCGCTGCCGCCACCGAAGAGCAGACCGCCGTCGTGGAAGCGATCAACGT
GGACATCACCGAGATCAATACGCTGAACCAGCAAGGCGTAGAGAACCTGAACGCGACCCTGCGCGCGTGCACTGACCTTG
AACAGCAGTCCACCCGACTGACGCAGTTGGTGGGCAGTTTCAGGATCTGA

Upstream 100 bases:

>100_bases
ACATGACATTCATAAACACCGATTCCCGCCGATAACCACCCCTGCTCCACCCACTACCTATGACCCCTTGCGCAATACCC
CTCTAAAGGCTCATATCGGC

Downstream 100 bases:

>100_bases
TGTGCCAAGGCCGCTGCCGGGAAGCGTTCGGCAGCGGCCTGCCTTGCATAAATATCGGGGAATAGCGCCAATCTCTCGTT
TTGGCGGTATGGTTACGCTT

Product: histidine kinase, HAMP region:Cache: chemotaxis sensory transducer

Products: NA

Alternate protein names: H3 [H]

Number of amino acids: Translated: 629; Mature: 629

Protein sequence:

>629_residues
MRKSLKFSHKILLAASLVVIAAFTLFTFYNDYLQRNALHVQLKENLNQTSESTAGNIRNWLSGRILLVENLAENASSPQS
PQEQNRVLGQPTLIATFMSIYQGRSDGSFVTQPPDDMSADYDPRTRPWYVDALRAGKTILTEPYLDAVTKGLVVTLATPI
KGDSGVSGVIGGDLSLEILVKMISSLRMHGDGYAFLVDANGRILVHPDTSLVMKTLAEVYPANTPRLSQDLSESEYAGKT
QILTFAHVDGLPSVNWYVGVAMDKDIAYAALGEFRNSAIVATVIAVVLIILLLGMLLSVLLRPLNLMGRAMHDIAAGEGD
LTKRLVIESQDEFGHLGNGFNLFVERIHDSMREVASSTVQLNEVALRVLNASNSSMLNSDQQSHRTNSVAAAINELGAAT
QEIAQNAARASGHSSDARTLASDGQDVVGQNIEAMSRLSKRISSASGQIETLNTKTANIGQILDVITGISQQTNLLALNA
AIEAARAGEAGRGFAVVADEVRSLAHRTQESASQVQEMIEQLQSGAREAVSIMNDSQRESVETVGIANKAVASLEHVTER
IGEIDGMNQSVAAATEEQTAVVEAINVDITEINTLNQQGVENLNATLRACTDLEQQSTRLTQLVGSFRI

Sequences:

>Translated_629_residues
MRKSLKFSHKILLAASLVVIAAFTLFTFYNDYLQRNALHVQLKENLNQTSESTAGNIRNWLSGRILLVENLAENASSPQS
PQEQNRVLGQPTLIATFMSIYQGRSDGSFVTQPPDDMSADYDPRTRPWYVDALRAGKTILTEPYLDAVTKGLVVTLATPI
KGDSGVSGVIGGDLSLEILVKMISSLRMHGDGYAFLVDANGRILVHPDTSLVMKTLAEVYPANTPRLSQDLSESEYAGKT
QILTFAHVDGLPSVNWYVGVAMDKDIAYAALGEFRNSAIVATVIAVVLIILLLGMLLSVLLRPLNLMGRAMHDIAAGEGD
LTKRLVIESQDEFGHLGNGFNLFVERIHDSMREVASSTVQLNEVALRVLNASNSSMLNSDQQSHRTNSVAAAINELGAAT
QEIAQNAARASGHSSDARTLASDGQDVVGQNIEAMSRLSKRISSASGQIETLNTKTANIGQILDVITGISQQTNLLALNA
AIEAARAGEAGRGFAVVADEVRSLAHRTQESASQVQEMIEQLQSGAREAVSIMNDSQRESVETVGIANKAVASLEHVTER
IGEIDGMNQSVAAATEEQTAVVEAINVDITEINTLNQQGVENLNATLRACTDLEQQSTRLTQLVGSFRI
>Mature_629_residues
MRKSLKFSHKILLAASLVVIAAFTLFTFYNDYLQRNALHVQLKENLNQTSESTAGNIRNWLSGRILLVENLAENASSPQS
PQEQNRVLGQPTLIATFMSIYQGRSDGSFVTQPPDDMSADYDPRTRPWYVDALRAGKTILTEPYLDAVTKGLVVTLATPI
KGDSGVSGVIGGDLSLEILVKMISSLRMHGDGYAFLVDANGRILVHPDTSLVMKTLAEVYPANTPRLSQDLSESEYAGKT
QILTFAHVDGLPSVNWYVGVAMDKDIAYAALGEFRNSAIVATVIAVVLIILLLGMLLSVLLRPLNLMGRAMHDIAAGEGD
LTKRLVIESQDEFGHLGNGFNLFVERIHDSMREVASSTVQLNEVALRVLNASNSSMLNSDQQSHRTNSVAAAINELGAAT
QEIAQNAARASGHSSDARTLASDGQDVVGQNIEAMSRLSKRISSASGQIETLNTKTANIGQILDVITGISQQTNLLALNA
AIEAARAGEAGRGFAVVADEVRSLAHRTQESASQVQEMIEQLQSGAREAVSIMNDSQRESVETVGIANKAVASLEHVTER
IGEIDGMNQSVAAATEEQTAVVEAINVDITEINTLNQQGVENLNATLRACTDLEQQSTRLTQLVGSFRI

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=358, Percent_Identity=30.4469273743017, Blast_Score=126, Evalue=3e-30,
Organism=Escherichia coli, GI2367378, Length=350, Percent_Identity=30.2857142857143, Blast_Score=122, Evalue=1e-28,
Organism=Escherichia coli, GI1788195, Length=333, Percent_Identity=31.5315315315315, Blast_Score=115, Evalue=6e-27,
Organism=Escherichia coli, GI1788194, Length=347, Percent_Identity=27.0893371757925, Blast_Score=112, Evalue=6e-26,
Organism=Escherichia coli, GI1789453, Length=391, Percent_Identity=26.0869565217391, Blast_Score=90, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 67766; Mature: 67766

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKSLKFSHKILLAASLVVIAAFTLFTFYNDYLQRNALHVQLKENLNQTSESTAGNIRNW
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHCCHHHHHHHHHHHHH
LSGRILLVENLAENASSPQSPQEQNRVLGQPTLIATFMSIYQGRSDGSFVTQPPDDMSAD
HCCCEEEEEHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
YDPRTRPWYVDALRAGKTILTEPYLDAVTKGLVVTLATPIKGDSGVSGVIGGDLSLEILV
CCCCCCCEEHHHHHCCCHHHCCHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCHHHHHHH
KMISSLRMHGDGYAFLVDANGRILVHPDTSLVMKTLAEVYPANTPRLSQDLSESEYAGKT
HHHHHHHCCCCCEEEEEECCCEEEECCCHHHHHHHHHHHCCCCCCHHHHHCCHHHCCCCE
QILTFAHVDGLPSVNWYVGVAMDKDIAYAALGEFRNSAIVATVIAVVLIILLLGMLLSVL
EEEEEEECCCCCCCCEEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
LRPLNLMGRAMHDIAAGEGDLTKRLVIESQDEFGHLGNGFNLFVERIHDSMREVASSTVQ
HHHHHHHHHHHHHHHCCCCCCHHHHHEECCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
LNEVALRVLNASNSSMLNSDQQSHRTNSVAAAINELGAATQEIAQNAARASGHSSDARTL
HHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
ASDGQDVVGQNIEAMSRLSKRISSASGQIETLNTKTANIGQILDVITGISQQTNLLALNA
HCCCHHHHHCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCCCCCEEEHHH
AIEAARAGEAGRGFAVVADEVRSLAHRTQESASQVQEMIEQLQSGAREAVSIMNDSQRES
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
VETVGIANKAVASLEHVTERIGEIDGMNQSVAAATEEQTAVVEAINVDITEINTLNQQGV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHH
ENLNATLRACTDLEQQSTRLTQLVGSFRI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRKSLKFSHKILLAASLVVIAAFTLFTFYNDYLQRNALHVQLKENLNQTSESTAGNIRNW
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHCCHHHHHHHHHHHHH
LSGRILLVENLAENASSPQSPQEQNRVLGQPTLIATFMSIYQGRSDGSFVTQPPDDMSAD
HCCCEEEEEHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
YDPRTRPWYVDALRAGKTILTEPYLDAVTKGLVVTLATPIKGDSGVSGVIGGDLSLEILV
CCCCCCCEEHHHHHCCCHHHCCHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCHHHHHHH
KMISSLRMHGDGYAFLVDANGRILVHPDTSLVMKTLAEVYPANTPRLSQDLSESEYAGKT
HHHHHHHCCCCCEEEEEECCCEEEECCCHHHHHHHHHHHCCCCCCHHHHHCCHHHCCCCE
QILTFAHVDGLPSVNWYVGVAMDKDIAYAALGEFRNSAIVATVIAVVLIILLLGMLLSVL
EEEEEEECCCCCCCCEEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
LRPLNLMGRAMHDIAAGEGDLTKRLVIESQDEFGHLGNGFNLFVERIHDSMREVASSTVQ
HHHHHHHHHHHHHHHCCCCCCHHHHHEECCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
LNEVALRVLNASNSSMLNSDQQSHRTNSVAAAINELGAATQEIAQNAARASGHSSDARTL
HHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
ASDGQDVVGQNIEAMSRLSKRISSASGQIETLNTKTANIGQILDVITGISQQTNLLALNA
HCCCHHHHHCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCCCCCEEEHHH
AIEAARAGEAGRGFAVVADEVRSLAHRTQESASQVQEMIEQLQSGAREAVSIMNDSQRES
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
VETVGIANKAVASLEHVTERIGEIDGMNQSVAAATEEQTAVVEAINVDITEINTLNQQGV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHH
ENLNATLRACTDLEQQSTRLTQLVGSFRI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8188684; 9384377 [H]