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The map label for this gene is flgC [H]

Identifier: 66046709

GI number: 66046709

Start: 4151693

End: 4152133

Strand: Reverse

Name: flgC [H]

Synonym: Psyr_3480

Alternate gene names: 66046709

Gene position: 4152133-4151693 (Counterclockwise)

Preceding gene: 66046710

Following gene: 66046708

Centisome position: 68.14

GC content: 56.69

Gene sequence:

>441_bases
ATGTCACTAGCCAATGTGTTCAACATTGCCGGTAGCGCCATGAGTGCCCAGACCACGCGTCTGAACACCACGGCCAGTAA
CATCGCCAACGCCGAGACCGTGTCTTCGAGCATGGACCAGACCTATCGCGCCCGTCACCCGGTGTTCGCCACCGTGATGC
AGGGTCAGCAGTCCACAGGTGGTTCGCTGTTCCAGGACCAGGGCGAAGCCGGGCAGGGTGTTCAGGTCAACGGCATCATC
GAAGACAGCTCGAACCTGGAAGCACGTTACGAGCCCAATCATCCTTCCGCTGACAAGGACGGGTATGTCTACTACCCCAA
CGTCAATGTCGTGGAAGAAATGGCCGACATGATTTCTGCCAGCCGGTCTTTCCAGACCAACGCAGAAATCATGAACACCG
CTAAATCCATGATGCAGAAGGTTCTGACCCTCGGTCAGTGA

Upstream 100 bases:

>100_bases
GGCCAGCTATACCGAGAACGCCATGGGCTTCCAGGCCAGCTTCACATTGCTCAACAGCAAGTTCAAGGGGCTGGTTGCAG
CCCTTCGCGGAGAATAATTC

Downstream 100 bases:

>100_bases
TAGAAGGCGAACGTTATGGCCGTTGATAGCACCGCAGCAAACAGCGTTTCATCGACATTTTTGAATACGCTGCAGAATCC
GACGCCGACCGCGACGAATT

Product: flagellar basal body rod protein FlgC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MSLANVFNIAGSAMSAQTTRLNTTASNIANAETVSSSMDQTYRARHPVFATVMQGQQSTGGSLFQDQGEAGQGVQVNGII
EDSSNLEARYEPNHPSADKDGYVYYPNVNVVEEMADMISASRSFQTNAEIMNTAKSMMQKVLTLGQ

Sequences:

>Translated_146_residues
MSLANVFNIAGSAMSAQTTRLNTTASNIANAETVSSSMDQTYRARHPVFATVMQGQQSTGGSLFQDQGEAGQGVQVNGII
EDSSNLEARYEPNHPSADKDGYVYYPNVNVVEEMADMISASRSFQTNAEIMNTAKSMMQKVLTLGQ
>Mature_145_residues
SLANVFNIAGSAMSAQTTRLNTTASNIANAETVSSSMDQTYRARHPVFATVMQGQQSTGGSLFQDQGEAGQGVQVNGIIE
DSSNLEARYEPNHPSADKDGYVYYPNVNVVEEMADMISASRSFQTNAEIMNTAKSMMQKVLTLGQ

Specific function: Unknown

COG id: COG1558

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787314, Length=146, Percent_Identity=47.945205479452, Blast_Score=130, Evalue=4e-32,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006299 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 15724; Mature: 15592

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLANVFNIAGSAMSAQTTRLNTTASNIANAETVSSSMDQTYRARHPVFATVMQGQQSTG
CCHHHHHHHCCCCCCCCHHCCCCHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCC
GSLFQDQGEAGQGVQVNGIIEDSSNLEARYEPNHPSADKDGYVYYPNVNVVEEMADMISA
CCCCCCCCCCCCCEEEEEEEECCCCCCEEECCCCCCCCCCCEEEECCCHHHHHHHHHHHH
SRSFQTNAEIMNTAKSMMQKVLTLGQ
HCCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SLANVFNIAGSAMSAQTTRLNTTASNIANAETVSSSMDQTYRARHPVFATVMQGQQSTG
CHHHHHHHCCCCCCCCHHCCCCHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCC
GSLFQDQGEAGQGVQVNGIIEDSSNLEARYEPNHPSADKDGYVYYPNVNVVEEMADMISA
CCCCCCCCCCCCCEEEEEEEECCCCCCEEECCCCCCCCCCCEEEECCCHHHHHHHHHHHH
SRSFQTNAEIMNTAKSMMQKVLTLGQ
HCCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA