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The map label for this gene is flgF [H]

Identifier: 66046705

GI number: 66046705

Start: 4146472

End: 4147212

Strand: Reverse

Name: flgF [H]

Synonym: Psyr_3476

Alternate gene names: 66046705

Gene position: 4147212-4146472 (Counterclockwise)

Preceding gene: 66046706

Following gene: 66046704

Centisome position: 68.06

GC content: 61.0

Gene sequence:

>741_bases
GTGGACAAGTTGCTTTACGTCGCAATGAGCGGTGCATCCGAAAACGCGATCGCGCAAAAGGCTCATGCCAACAACCTGGC
AAACGTCTCGACCAACGGTTTCATGCGTGACCTTGAACAGGCCCGCTCGATGCCGGTGTTTGGCGAGGTCATGCCATCGC
GTGCCTACGCCATGAGCGAGCGTCCCGGGACCGACTTTTCCGCCGGCGCCATGGTGCAGACCGGTCGTGAGCTGGACATC
GCTGTCAAGGGTGATGGCTGGATCGCGGTGCAGACGCCTGACGGCGGTGAAGCCTACACCCGCAGCTCCGGCATGAACAT
CGATGCTCTGGGCGTGTTGCGCGACGGCAGCGGTTTGCCGGTTATGGGCAACGGCGGTCCGATTGCCGTGCCGCCTCAGC
AGCAGATCGAGATCGGCGCCGACGGCACGATCAGCATTCGTTCGCTGGGCGAGAGTCCGCAGGTGATGGCGCAGGTCGAC
CGCATCAAACTGGTCAGGCCTGACCTGAAGACCATGGAGAAGGGCCCTGATGGCCTGATCCACACCAAGACCGGCCGGCC
TGCCGATGCAGATGCCACCGTTCAGGTCGAGTCCGGCTTTCTGCAGGCGAGCAACGTCAATGCGGTCGAGGAAATGACCT
CGGTACTGGCCTTGTCCCGTCAATTCGAATTGCACGTCAAGATGATGAAGACCGCCGAAGAAGACGATCAGTCTATGGCT
CGCGTCTTGCAACTTGGCTAA

Upstream 100 bases:

>100_bases
AATCAGGCATTTGTATCGAGCCTGACAAGTTGGTTCAAAAATTGCTTTAACCCTTTCAGAACAGCTACAGGCGGCAAGCG
TCTGTCGGAGGAGGAAGACT

Downstream 100 bases:

>100_bases
TCAATGACAGCTTGCGCCGACAAACCGGCGCTCGAGGAGAACACACATGCTTCCTGCACTATACGTCGCCAAAACCGGTC
TTGCCGCTCAGGACACCAAC

Product: flagellar basal body rod protein FlgF

Products: NA

Alternate protein names: Putative proximal rod protein [H]

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MDKLLYVAMSGASENAIAQKAHANNLANVSTNGFMRDLEQARSMPVFGEVMPSRAYAMSERPGTDFSAGAMVQTGRELDI
AVKGDGWIAVQTPDGGEAYTRSSGMNIDALGVLRDGSGLPVMGNGGPIAVPPQQQIEIGADGTISIRSLGESPQVMAQVD
RIKLVRPDLKTMEKGPDGLIHTKTGRPADADATVQVESGFLQASNVNAVEEMTSVLALSRQFELHVKMMKTAEEDDQSMA
RVLQLG

Sequences:

>Translated_246_residues
MDKLLYVAMSGASENAIAQKAHANNLANVSTNGFMRDLEQARSMPVFGEVMPSRAYAMSERPGTDFSAGAMVQTGRELDI
AVKGDGWIAVQTPDGGEAYTRSSGMNIDALGVLRDGSGLPVMGNGGPIAVPPQQQIEIGADGTISIRSLGESPQVMAQVD
RIKLVRPDLKTMEKGPDGLIHTKTGRPADADATVQVESGFLQASNVNAVEEMTSVLALSRQFELHVKMMKTAEEDDQSMA
RVLQLG
>Mature_246_residues
MDKLLYVAMSGASENAIAQKAHANNLANVSTNGFMRDLEQARSMPVFGEVMPSRAYAMSERPGTDFSAGAMVQTGRELDI
AVKGDGWIAVQTPDGGEAYTRSSGMNIDALGVLRDGSGLPVMGNGGPIAVPPQQQIEIGADGTISIRSLGESPQVMAQVD
RIKLVRPDLKTMEKGPDGLIHTKTGRPADADATVQVESGFLQASNVNAVEEMTSVLALSRQFELHVKMMKTAEEDDQSMA
RVLQLG

Specific function: Unknown

COG id: COG4787

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787317, Length=241, Percent_Identity=40.6639004149378, Blast_Score=174, Evalue=4e-45,
Organism=Escherichia coli, GI1787318, Length=274, Percent_Identity=27.7372262773723, Blast_Score=84, Evalue=7e-18,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR020013
- InterPro:   IPR012836 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 26148; Mature: 26148

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKLLYVAMSGASENAIAQKAHANNLANVSTNGFMRDLEQARSMPVFGEVMPSRAYAMSE
CCCEEEEEECCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHCCCHHEECCC
RPGTDFSAGAMVQTGRELDIAVKGDGWIAVQTPDGGEAYTRSSGMNIDALGVLRDGSGLP
CCCCCCCCCCEEECCCEEEEEEECCCEEEEECCCCCCCEECCCCCCEEEEEEEECCCCCE
VMGNGGPIAVPPQQQIEIGADGTISIRSLGESPQVMAQVDRIKLVRPDLKTMEKGPDGLI
EECCCCCEECCCHHHEEECCCCEEEEEECCCCHHHHHHHHHHEEECCCHHHHHCCCCCEE
HTKTGRPADADATVQVESGFLQASNVNAVEEMTSVLALSRQFELHVKMMKTAEEDDQSMA
ECCCCCCCCCCEEEEEECCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
RVLQLG
HHHHCC
>Mature Secondary Structure
MDKLLYVAMSGASENAIAQKAHANNLANVSTNGFMRDLEQARSMPVFGEVMPSRAYAMSE
CCCEEEEEECCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHCCCHHEECCC
RPGTDFSAGAMVQTGRELDIAVKGDGWIAVQTPDGGEAYTRSSGMNIDALGVLRDGSGLP
CCCCCCCCCCEEECCCEEEEEEECCCEEEEECCCCCCCEECCCCCCEEEEEEEECCCCCE
VMGNGGPIAVPPQQQIEIGADGTISIRSLGESPQVMAQVDRIKLVRPDLKTMEKGPDGLI
EECCCCCEECCCHHHEEECCCCEEEEEECCCCHHHHHHHHHHEEECCCHHHHHCCCCCEE
HTKTGRPADADATVQVESGFLQASNVNAVEEMTSVLALSRQFELHVKMMKTAEEDDQSMA
ECCCCCCCCCCEEEEEECCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
RVLQLG
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]