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The map label for this gene is fliD [H]

Identifier: 66046693

GI number: 66046693

Start: 4127689

End: 4129140

Strand: Reverse

Name: fliD [H]

Synonym: Psyr_3464

Alternate gene names: 66046693

Gene position: 4129140-4127689 (Counterclockwise)

Preceding gene: 66046694

Following gene: 66046692

Centisome position: 67.76

GC content: 56.13

Gene sequence:

>1452_bases
ATGGCAAGTCCGATTACATCTACAAATGGTATTGGGTCCGGTTTGGCAATCGGTTCCATCGTCGAAGGTCTTGTCGGTGC
TGAAAAAGCGCCCAAGCAGAACCAGATCGACAAGCAGAGCGCCTCCACGACTGCATCCCTGTCGGGTGTCAGTCAGTTGA
CGTCTGCACTGGCTGCGTTCCAGAAGACACTGGATACCCTTGCCAGTTCCACCACGCCTGCCTTCCAGGGCTTTGCTGCT
ACGTCTTCTAATGAAGCGGTGGTCAAGGCCACAGCGGGCAACACGGCAGTCAACGGCTCCTACGCGATCAACGTTAGCCA
GCTGGCAACGCCTTCGAAGGTGGCTACCGCCGCGCTAGACTCGACGCAGTCAAGTGCTATTCCGAGTGGTACTCTGAAAA
TCACTCAAAATGGCACTGATTACAACGTGGCGATCGACAAGACCTCGACGCTGCAGGAAGTGCGCGACAAGGTCAACTCG
ACGCTGCAGGGTAAAGGCATCACCGCCAACATCATCAACGACAACAACGGTTCCAGGCTGGTGTTCAGTTCGACGACCAC
CGGCAAGGGCAGTGACATTTCGGTGACGGGCGCTTCCGGCCAGGAAGCACTTAACATCGATGGCACCAAGTTGATGAGTG
AATCCAGTACCGGCGCTGGTGCGATTACCGCTGTCGCCAAGGACGCCGCATTCACGGTCGATGGCCTGAGTCTGACCAGC
AAGACCAATACCGTGAGTACGGCCATTTCCGGTCTGACGTTCGAACTGGTCGCGCCCAGCGCTTCTTCTGCTCCTTCGGC
ATCGACCACAGTCACGGTAGCCACTAACACCGATGGTCTGAAAACGTCATTGCAGTCTTTCGTCGACTCTTACAACACAC
TGGTTTCACTGGTGTCGTCGTTGACCAAGGGCACTGTCGACAGTCAGGGTAAATACACGGCCGCTGCGTTGACCGGCGAT
TCCGCGCCGCGTGCCCTGCTGGCGACGATACGCGACCAGATTGCCACGGCTACGTCGAATGCCGGCTTGAGTTCCCTGGC
GCAGTTGGGGATCAAGACTCAACAGTCTGACGGCAAATTGACGTTAAGCACGACCGAACTCACAACAGCGCTGAGCGACA
AGAAGCTGGGCAGCCAGATTCAGGCGATGTTCACCGGTGTGACCAATGCTGACGGCACCAGCTCGGGTGGCTTGATCGCA
CGCATGAACACTGCGCTTGAGCCGTATACGAAAGCCGACGGCGTTCTGGCTGGCAAGACCACCAGTCTTAATAAAGTGCA
GACGCGACTGGCCAGTGATCAGGAGGCGCTCAACCGTCGTATTACGACATTGACGGCAACCCTCACCAAGAAATATAACG
CAATGGACCTGGTCGTCGGGCAGTTAAAGGCAACGGCTTCAAGCATTACTTCGATTTTTGAAGCGATGAACGCGCAGAAA
AACGCCTCGTAA

Upstream 100 bases:

>100_bases
TCCGCGCCAAGGCCTGATCGCCGGTACCGCATGTGTTGTCGGGTCATTCGCCTTTTAAAAGGGCGGTTAACCCTGCGGCA
TTCTTGAAGGGAGAAGCACC

Downstream 100 bases:

>100_bases
AAAACCAGTGCAGAAGTACCAGGAACCCGACGCTGTGTCGGGTTCTTGCTTTTAGGCTAAAGTTTCCGCGCACTGCGTCG
ATAGCTTGAGTATCAGTATT

Product: flagellar hook-associated protein 2, N-terminal:flagellar hook-associated 2, C-terminal:flagellin hook IN

Products: NA

Alternate protein names: HAP2; Filament cap protein [H]

Number of amino acids: Translated: 483; Mature: 482

Protein sequence:

>483_residues
MASPITSTNGIGSGLAIGSIVEGLVGAEKAPKQNQIDKQSASTTASLSGVSQLTSALAAFQKTLDTLASSTTPAFQGFAA
TSSNEAVVKATAGNTAVNGSYAINVSQLATPSKVATAALDSTQSSAIPSGTLKITQNGTDYNVAIDKTSTLQEVRDKVNS
TLQGKGITANIINDNNGSRLVFSSTTTGKGSDISVTGASGQEALNIDGTKLMSESSTGAGAITAVAKDAAFTVDGLSLTS
KTNTVSTAISGLTFELVAPSASSAPSASTTVTVATNTDGLKTSLQSFVDSYNTLVSLVSSLTKGTVDSQGKYTAAALTGD
SAPRALLATIRDQIATATSNAGLSSLAQLGIKTQQSDGKLTLSTTELTTALSDKKLGSQIQAMFTGVTNADGTSSGGLIA
RMNTALEPYTKADGVLAGKTTSLNKVQTRLASDQEALNRRITTLTATLTKKYNAMDLVVGQLKATASSITSIFEAMNAQK
NAS

Sequences:

>Translated_483_residues
MASPITSTNGIGSGLAIGSIVEGLVGAEKAPKQNQIDKQSASTTASLSGVSQLTSALAAFQKTLDTLASSTTPAFQGFAA
TSSNEAVVKATAGNTAVNGSYAINVSQLATPSKVATAALDSTQSSAIPSGTLKITQNGTDYNVAIDKTSTLQEVRDKVNS
TLQGKGITANIINDNNGSRLVFSSTTTGKGSDISVTGASGQEALNIDGTKLMSESSTGAGAITAVAKDAAFTVDGLSLTS
KTNTVSTAISGLTFELVAPSASSAPSASTTVTVATNTDGLKTSLQSFVDSYNTLVSLVSSLTKGTVDSQGKYTAAALTGD
SAPRALLATIRDQIATATSNAGLSSLAQLGIKTQQSDGKLTLSTTELTTALSDKKLGSQIQAMFTGVTNADGTSSGGLIA
RMNTALEPYTKADGVLAGKTTSLNKVQTRLASDQEALNRRITTLTATLTKKYNAMDLVVGQLKATASSITSIFEAMNAQK
NAS
>Mature_482_residues
ASPITSTNGIGSGLAIGSIVEGLVGAEKAPKQNQIDKQSASTTASLSGVSQLTSALAAFQKTLDTLASSTTPAFQGFAAT
SSNEAVVKATAGNTAVNGSYAINVSQLATPSKVATAALDSTQSSAIPSGTLKITQNGTDYNVAIDKTSTLQEVRDKVNST
LQGKGITANIINDNNGSRLVFSSTTTGKGSDISVTGASGQEALNIDGTKLMSESSTGAGAITAVAKDAAFTVDGLSLTSK
TNTVSTAISGLTFELVAPSASSAPSASTTVTVATNTDGLKTSLQSFVDSYNTLVSLVSSLTKGTVDSQGKYTAAALTGDS
APRALLATIRDQIATATSNAGLSSLAQLGIKTQQSDGKLTLSTTELTTALSDKKLGSQIQAMFTGVTNADGTSSGGLIAR
MNTALEPYTKADGVLAGKTTSLNKVQTRLASDQEALNRRITTLTATLTKKYNAMDLVVGQLKATASSITSIFEAMNAQKN
AS

Specific function: Required for the morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the

COG id: COG1345

COG function: function code N; Flagellar capping protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliD family [H]

Homologues:

Organism=Escherichia coli, GI1788233, Length=479, Percent_Identity=32.3590814196242, Blast_Score=138, Evalue=9e-34,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010810
- InterPro:   IPR010809
- InterPro:   IPR003481 [H]

Pfam domain/function: PF07196 Flagellin_IN; PF07195 FliD_C; PF02465 FliD_N [H]

EC number: NA

Molecular weight: Translated: 48781; Mature: 48649

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASPITSTNGIGSGLAIGSIVEGLVGAEKAPKQNQIDKQSASTTASLSGVSQLTSALAAF
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHH
QKTLDTLASSTTPAFQGFAATSSNEAVVKATAGNTAVNGSYAINVSQLATPSKVATAALD
HHHHHHHHCCCCCHHCCCEECCCCCEEEEEECCCEEECCEEEEEHHHHCCCHHHHHHHHC
STQSSAIPSGTLKITQNGTDYNVAIDKTSTLQEVRDKVNSTLQGKGITANIINDNNGSRL
CCCCCCCCCCEEEEEECCCEEEEEECCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCEE
VFSSTTTGKGSDISVTGASGQEALNIDGTKLMSESSTGAGAITAVAKDAAFTVDGLSLTS
EEECCCCCCCCEEEEECCCCCCEECCCCHHEECCCCCCCCEEEEECCCCEEEECCEEECC
KTNTVSTAISGLTFELVAPSASSAPSASTTVTVATNTDGLKTSLQSFVDSYNTLVSLVSS
CCCHHHHHHCCCEEEEECCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH
LTKGTVDSQGKYTAAALTGDSAPRALLATIRDQIATATSNAGLSSLAQLGIKTQQSDGKL
HHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCEECCCCEE
TLSTTELTTALSDKKLGSQIQAMFTGVTNADGTSSGGLIARMNTALEPYTKADGVLAGKT
EEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEECCC
TSLNKVQTRLASDQEALNRRITTLTATLTKKYNAMDLVVGQLKATASSITSIFEAMNAQK
CCHHHHHHHHCCCHHHHHHHHHHEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
NAS
CCC
>Mature Secondary Structure 
ASPITSTNGIGSGLAIGSIVEGLVGAEKAPKQNQIDKQSASTTASLSGVSQLTSALAAF
CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHH
QKTLDTLASSTTPAFQGFAATSSNEAVVKATAGNTAVNGSYAINVSQLATPSKVATAALD
HHHHHHHHCCCCCHHCCCEECCCCCEEEEEECCCEEECCEEEEEHHHHCCCHHHHHHHHC
STQSSAIPSGTLKITQNGTDYNVAIDKTSTLQEVRDKVNSTLQGKGITANIINDNNGSRL
CCCCCCCCCCEEEEEECCCEEEEEECCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCEE
VFSSTTTGKGSDISVTGASGQEALNIDGTKLMSESSTGAGAITAVAKDAAFTVDGLSLTS
EEECCCCCCCCEEEEECCCCCCEECCCCHHEECCCCCCCCEEEEECCCCEEEECCEEECC
KTNTVSTAISGLTFELVAPSASSAPSASTTVTVATNTDGLKTSLQSFVDSYNTLVSLVSS
CCCHHHHHHCCCEEEEECCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH
LTKGTVDSQGKYTAAALTGDSAPRALLATIRDQIATATSNAGLSSLAQLGIKTQQSDGKL
HHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCEECCCCEE
TLSTTELTTALSDKKLGSQIQAMFTGVTNADGTSSGGLIARMNTALEPYTKADGVLAGKT
EEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEECCC
TSLNKVQTRLASDQEALNRRITTLTATLTKKYNAMDLVVGQLKATASSITSIFEAMNAQK
CCHHHHHHHHCCCHHHHHHHHHHEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
NAS
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9488388; 10678962 [H]