| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is fliK [C]
Identifier: 66046678
GI number: 66046678
Start: 4112426
End: 4113829
Strand: Reverse
Name: fliK [C]
Synonym: Psyr_3449
Alternate gene names: 66046678
Gene position: 4113829-4112426 (Counterclockwise)
Preceding gene: 66046679
Following gene: 66046677
Centisome position: 67.51
GC content: 60.83
Gene sequence:
>1404_bases ATGCCCCTTGCTACCAATGCGCTTCTTCAGGCCACAACCTCTGTGACCGCCAGGTCCGGTGTGGCCAACAATGCGGTCAA GTCTGCTGACAGCAGCAAGGACGGGGCCTCCAGCTTTTCCAATGTCTATGCAAAGCAGGCGAAAGACACCGTGCCTGCGC GCGAAGATGCGCCAGTAAAGCCAGCCCGCGACAAGACCGCGCCTGACAAGGACAAGGTTGCCGCCGGCAAGGACAAGCCT GCAAGCGATCAGGCAAATGCCGCCGACAAGTCTGGCGTTGCCGATAGCGGCAATGATTTGCCAGCCAGGCCGGCTGCTGC AGATGATGACGCAGCGCATTCTGACTCGAAGCAGGATGATGCGCAGGCCTCTGCCGATCCGGCGCTGAATGACGGCCAGG CGATCGTCGATCCCGTCCTTGATCCGGCATTGCAGGCAATGACCGCACAGGCTCCCGCGGCACCTGTTGTAGCCAAGGCG CCAAGTGCACAAGTTGTCACTGCGCCAGCGGTCTCGGCGCTCACCACTACGCAGGCGGCCCCGCCAGCAGTGGCTAAAGA AGCCTTCGATCCGGACGCCGATCCGCTTGATGGTCTGGATGCTGTGCAGCTGGCGCTGGAAAACGCCACTGCCAAGACTC AACTGGCTGCGCAGAATGCCCAGGCTGCCAACAAGGCGACGCCGAGCAATGCTGAAGCTGACCCGAATCAGAATATCGTC AATAACCTGTCGGTCCTGAGCGAGCAGCTTCCGTCCGAAGGCGGCAGCACCGAAAGCAGTGACAAGTCGTTCAGCGGTTT GATCGGCGAGGGGCTGAAGGATGTCAAAGGCGCCGCCGGTGATACTCGCGTCGACAACTTTGCCGATCGCCTCGCAGCGC TCAGTCAGGCCGCGCAACCTGCACGCGCAGCGGCTGCACCTGCCGCACCCTTGATGAACCAACCGTTGGCCATGCATCAA AGCGGCTGGACCGAAGGCATCGTCGATCGCGTCATGTACCTGTCGAGCCAGAACCTCAAGACCGCCGATATCAAGCTGGA ACCTGCCGAACTCGGTCGTCTTGATATCCGTATCAACATGGCGCCTGAACAGCAGACCCAGGTGACATTCATGAGCGCCC ATATGGGCGTACGTGATGCGCTGGAAAGTCAGATGTCGAAGTTGCGTGAGTCATTCGTGCAGCAGGGGCTTGGCAACGTC GACGTCAATGTCTCCGATCAGTCGCAACAGCAGGCCCAGCAACAGGCTCAGGAACAGGCCAGCCGCTCCCAGCGCAGCGG TCGTGGCGGTGGCATGAGCTCCGGCGATAGCTCCGATGAAATCGCAGGCGTCGATGCGGCCATCCCGGTCAGCCAGCCAG CAGCACGTGTGATAGGCACCAGTGAGATCGATTATTACGCGTGA
Upstream 100 bases:
>100_bases ATACCCTCGATCCCCGCTATGGGGAATCATTAGATAACTGGCCCGTATATTGCTAACTATTTCGGTAAGGCGATAACCAG CAGCTGATGCGGAGACCGAA
Downstream 100 bases:
>100_bases GGCTCCTGCGTCACATGGCAACCGCGACGCGACGTCATGCATTGCCTGCACGTCTTGGCGCAGAAATGCTTTTTGAGCGC GATGGCACTGACGACGCAGA
Product: flagellar hook-length control protein
Products: NA
Alternate protein names: Flagellar Hook-Length Control Protein FliK
Number of amino acids: Translated: 467; Mature: 466
Protein sequence:
>467_residues MPLATNALLQATTSVTARSGVANNAVKSADSSKDGASSFSNVYAKQAKDTVPAREDAPVKPARDKTAPDKDKVAAGKDKP ASDQANAADKSGVADSGNDLPARPAAADDDAAHSDSKQDDAQASADPALNDGQAIVDPVLDPALQAMTAQAPAAPVVAKA PSAQVVTAPAVSALTTTQAAPPAVAKEAFDPDADPLDGLDAVQLALENATAKTQLAAQNAQAANKATPSNAEADPNQNIV NNLSVLSEQLPSEGGSTESSDKSFSGLIGEGLKDVKGAAGDTRVDNFADRLAALSQAAQPARAAAAPAAPLMNQPLAMHQ SGWTEGIVDRVMYLSSQNLKTADIKLEPAELGRLDIRINMAPEQQTQVTFMSAHMGVRDALESQMSKLRESFVQQGLGNV DVNVSDQSQQQAQQQAQEQASRSQRSGRGGGMSSGDSSDEIAGVDAAIPVSQPAARVIGTSEIDYYA
Sequences:
>Translated_467_residues MPLATNALLQATTSVTARSGVANNAVKSADSSKDGASSFSNVYAKQAKDTVPAREDAPVKPARDKTAPDKDKVAAGKDKP ASDQANAADKSGVADSGNDLPARPAAADDDAAHSDSKQDDAQASADPALNDGQAIVDPVLDPALQAMTAQAPAAPVVAKA PSAQVVTAPAVSALTTTQAAPPAVAKEAFDPDADPLDGLDAVQLALENATAKTQLAAQNAQAANKATPSNAEADPNQNIV NNLSVLSEQLPSEGGSTESSDKSFSGLIGEGLKDVKGAAGDTRVDNFADRLAALSQAAQPARAAAAPAAPLMNQPLAMHQ SGWTEGIVDRVMYLSSQNLKTADIKLEPAELGRLDIRINMAPEQQTQVTFMSAHMGVRDALESQMSKLRESFVQQGLGNV DVNVSDQSQQQAQQQAQEQASRSQRSGRGGGMSSGDSSDEIAGVDAAIPVSQPAARVIGTSEIDYYA >Mature_466_residues PLATNALLQATTSVTARSGVANNAVKSADSSKDGASSFSNVYAKQAKDTVPAREDAPVKPARDKTAPDKDKVAAGKDKPA SDQANAADKSGVADSGNDLPARPAAADDDAAHSDSKQDDAQASADPALNDGQAIVDPVLDPALQAMTAQAPAAPVVAKAP SAQVVTAPAVSALTTTQAAPPAVAKEAFDPDADPLDGLDAVQLALENATAKTQLAAQNAQAANKATPSNAEADPNQNIVN NLSVLSEQLPSEGGSTESSDKSFSGLIGEGLKDVKGAAGDTRVDNFADRLAALSQAAQPARAAAAPAAPLMNQPLAMHQS GWTEGIVDRVMYLSSQNLKTADIKLEPAELGRLDIRINMAPEQQTQVTFMSAHMGVRDALESQMSKLRESFVQQGLGNVD VNVSDQSQQQAQQQAQEQASRSQRSGRGGGMSSGDSSDEIAGVDAAIPVSQPAARVIGTSEIDYYA
Specific function: Controls The Length Of The Flagellar Hook. [C]
COG id: COG3144
COG function: function code N; Flagellar hook-length control protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47880; Mature: 47749
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLATNALLQATTSVTARSGVANNAVKSADSSKDGASSFSNVYAKQAKDTVPAREDAPVK CCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC PARDKTAPDKDKVAAGKDKPASDQANAADKSGVADSGNDLPARPAAADDDAAHSDSKQDD CCCCCCCCCHHCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH AQASADPALNDGQAIVDPVLDPALQAMTAQAPAAPVVAKAPSAQVVTAPAVSALTTTQAA HHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCEEECCHHHHHHHCCCC PPAVAKEAFDPDADPLDGLDAVQLALENATAKTQLAAQNAQAANKATPSNAEADPNQNIV CCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH NNLSVLSEQLPSEGGSTESSDKSFSGLIGEGLKDVKGAAGDTRVDNFADRLAALSQAAQP HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCH ARAAAAPAAPLMNQPLAMHQSGWTEGIVDRVMYLSSQNLKTADIKLEPAELGRLDIRINM HHHHCCCCCHHHCCCHHHHHCCCHHHHHHHHHHHHCCCCEEEEEEECHHHCCEEEEEEEC APEQQTQVTFMSAHMGVRDALESQMSKLRESFVQQGLGNVDVNVSDQSQQQAQQQAQEQA CCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHH SRSQRSGRGGGMSSGDSSDEIAGVDAAIPVSQPAARVIGTSEIDYYA HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCC >Mature Secondary Structure PLATNALLQATTSVTARSGVANNAVKSADSSKDGASSFSNVYAKQAKDTVPAREDAPVK CCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC PARDKTAPDKDKVAAGKDKPASDQANAADKSGVADSGNDLPARPAAADDDAAHSDSKQDD CCCCCCCCCHHCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH AQASADPALNDGQAIVDPVLDPALQAMTAQAPAAPVVAKAPSAQVVTAPAVSALTTTQAA HHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCEEECCHHHHHHHCCCC PPAVAKEAFDPDADPLDGLDAVQLALENATAKTQLAAQNAQAANKATPSNAEADPNQNIV CCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH NNLSVLSEQLPSEGGSTESSDKSFSGLIGEGLKDVKGAAGDTRVDNFADRLAALSQAAQP HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCH ARAAAAPAAPLMNQPLAMHQSGWTEGIVDRVMYLSSQNLKTADIKLEPAELGRLDIRINM HHHHCCCCCHHHCCCHHHHHCCCHHHHHHHHHHHHCCCCEEEEEEECHHHCCEEEEEEEC APEQQTQVTFMSAHMGVRDALESQMSKLRESFVQQGLGNVDVNVSDQSQQQAQQQAQEQA CCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHH SRSQRSGRGGGMSSGDSSDEIAGVDAAIPVSQPAARVIGTSEIDYYA HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA