Click here to switch to the map view.

The map label for this gene is 66046601

Identifier: 66046601

GI number: 66046601

Start: 4031471

End: 4032091

Strand: Reverse

Name: 66046601

Synonym: Psyr_3372

Alternate gene names: NA

Gene position: 4032091-4031471 (Counterclockwise)

Preceding gene: 66046602

Following gene: 66046600

Centisome position: 66.17

GC content: 58.94

Gene sequence:

>621_bases
ATGAAAACCCGCCCCATTCATCCGTGGCCGGTGCGCCTGACCCACTGGGTCAATGCCGTGGGCATGGTCTGTATGTTCAT
GAGCGGTTGGGCGATTTACAACGCATCACCACTGATGCCGTTCACCTTTCCCAAATTCCTGACACTCGGCGGCTGGCTGG
GCGGTTCCATTGCCTGGCACTTCGCGGTGATGTGGCTGTTGGTCATCAACGGTCTGATTTATGTGCTGTATGGCGTGTTC
AGCCGCCATTTCAAGCGCGATCTGCTGCCGGTACGGCCGTCCGAAGTGACGCGTGACATGAATGACGCGCTGCATTTTCG
CCTGGTCCACGTCAAAGGCCGTTACAACGCCGTGCAACGACTGATGTATTGGCTGGTGCTGGCCATGGGCGTATTGGTGG
TGCTGTCCGGCCTGGCCATCTGGAAGCCGGTGCAATTTCAAGGGCTGGTCAGTCTGCTGGGCGGATTCGATTTCGCCCGT
TGGGTACATTTCGGGGCGATGACCGCCATCGGCGCGTTTGTCATCGTCCATCTGCTGCTGGTCGTGCTGGTGCCCAGTAC
CTTGCTGCCGATGATTACCGGCGGCCGCCAGCCGAACGAAGACGGAACTGCGCAATCATGA

Upstream 100 bases:

>100_bases
AGGACGGTTTCACACCGCCGATGTAATCACCGCCAGGGCTATCAGGGGCACAAGGCTGCCCCTGATAGCCTCTTCCATGC
CTGATCAGAGGGATCTCGAT

Downstream 100 bases:

>100_bases
ACGAACCACGTAAACGTACGACTCAGCGCATCATTCTGGAGCCTGCGCAGCAGCGTCAGCTGGTGGATATCCAGCGCCGC
TCGTTTCTGCGCGCGGGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: Thiosulfate Reductase Cytochrome B Subunit; Transmembrane Hydrogenase Cytochrome B-Type Subunit; HupC/HyaC/HydC Family Protein; Transmembrane B-Type Cytochrome Protein; Thiosulfate Reductase Cytochrome Subunit B; Thiosulfate Reductase Cytochrome B Subunit-Like Protein; Thiosulfate Reductase Cytochrome Subunit B-Like Protein; Transmembrane Hydrogenase Cytochrome B- Type Subunit; Cytochrome; Cytochrome B/B6 Domain Protein; Conserved Protein; Transmembrane Cytochrome B-Type Protein; Hydrogen Sulfide Production Membrane Anchoring Protein; B-Type Cytochomre; Transmembrane Hydrogenase Cytochrome

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MKTRPIHPWPVRLTHWVNAVGMVCMFMSGWAIYNASPLMPFTFPKFLTLGGWLGGSIAWHFAVMWLLVINGLIYVLYGVF
SRHFKRDLLPVRPSEVTRDMNDALHFRLVHVKGRYNAVQRLMYWLVLAMGVLVVLSGLAIWKPVQFQGLVSLLGGFDFAR
WVHFGAMTAIGAFVIVHLLLVVLVPSTLLPMITGGRQPNEDGTAQS

Sequences:

>Translated_206_residues
MKTRPIHPWPVRLTHWVNAVGMVCMFMSGWAIYNASPLMPFTFPKFLTLGGWLGGSIAWHFAVMWLLVINGLIYVLYGVF
SRHFKRDLLPVRPSEVTRDMNDALHFRLVHVKGRYNAVQRLMYWLVLAMGVLVVLSGLAIWKPVQFQGLVSLLGGFDFAR
WVHFGAMTAIGAFVIVHLLLVVLVPSTLLPMITGGRQPNEDGTAQS
>Mature_206_residues
MKTRPIHPWPVRLTHWVNAVGMVCMFMSGWAIYNASPLMPFTFPKFLTLGGWLGGSIAWHFAVMWLLVINGLIYVLYGVF
SRHFKRDLLPVRPSEVTRDMNDALHFRLVHVKGRYNAVQRLMYWLVLAMGVLVVLSGLAIWKPVQFQGLVSLLGGFDFAR
WVHFGAMTAIGAFVIVHLLLVVLVPSTLLPMITGGRQPNEDGTAQS

Specific function: Unknown

COG id: COG4117

COG function: function code C; Thiosulfate reductase cytochrome B subunit (membrane anchoring protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23188; Mature: 23188

Theoretical pI: Translated: 10.83; Mature: 10.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTRPIHPWPVRLTHWVNAVGMVCMFMSGWAIYNASPLMPFTFPKFLTLGGWLGGSIAWH
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHCHHHHHHHHH
FAVMWLLVINGLIYVLYGVFSRHFKRDLLPVRPSEVTRDMNDALHFRLVHVKGRYNAVQR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEEEEECCHHHHHHH
LMYWLVLAMGVLVVLSGLAIWKPVQFQGLVSLLGGFDFARWVHFGAMTAIGAFVIVHLLL
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
VVLVPSTLLPMITGGRQPNEDGTAQS
HHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MKTRPIHPWPVRLTHWVNAVGMVCMFMSGWAIYNASPLMPFTFPKFLTLGGWLGGSIAWH
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHCHHHHHHHHH
FAVMWLLVINGLIYVLYGVFSRHFKRDLLPVRPSEVTRDMNDALHFRLVHVKGRYNAVQR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEEEEECCHHHHHHH
LMYWLVLAMGVLVVLSGLAIWKPVQFQGLVSLLGGFDFARWVHFGAMTAIGAFVIVHLLL
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
VVLVPSTLLPMITGGRQPNEDGTAQS
HHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA