| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is efeU [H]
Identifier: 66046596
GI number: 66046596
Start: 4025868
End: 4026722
Strand: Direct
Name: efeU [H]
Synonym: Psyr_3367
Alternate gene names: 66046596
Gene position: 4025868-4026722 (Clockwise)
Preceding gene: 66046593
Following gene: 66046597
Centisome position: 66.07
GC content: 60.12
Gene sequence:
>855_bases ATGCTCGTTCCCTTTTTGATCATGCTGCGCGAAGGCATCGAAGCCGCACTTATCGTTGGCATTATCGCCAGTTACCTGAA GCAGACCGGCCGTGGCGAGTGGATGCCTGCGGTGTGGATCGGCGTATTTCTGGCTGTCGCGCTCTCGCTGTTCGTCGGTG GCGGGCTTGAGTTGATGAGCGCCGAGTTTCCGCAGAAGCAGCAGGAACTGTTCGAAGGCATCGTCGGCCTGATCGCCGTT GGCATTCTCAGTTCCATGGTGTTCTGGATGCGCAAGGTGGCACGATCGATCAAACACGCGCTGCACGAATCGCTGGACGC AGCCCTCACCGGCTCGAAAAACCAGACCTACGCGCTGATCGCCATGGTGTTTTTCGCCGTGGCCCGCGAAGGGCTGGAAA CCGTATTCTTTCTGCTCGCTGTGTTCCAGCAGAGCGAAGGCTCCGGCGCGCCGTTGGGCGCCCTGCTCGGTCTGTTGCTG GCGGTCGGTTTCGGCGTGGCCATCTACAGCGGCAGCATGCGTCTCAACCTGAGCCTGTTTTTCCGCTGGACCGGGCTGTT CATTCTGGTAGTGGCGGCGGGCATTCTCGCCAACTCCGTTCAGGCACTGCATGAAGCCGGGGTCTGGAATCACCTGCAGG AAGTGGTCTTCGACATCAGTGCACGGTTGCCGATGGACGGCCCTGCCGGTTCGGTGCTGGCAGGCATGTTCGGTTACCAG GACGCGCCGACGGTCAGCACTCTGAGTGCCTACCTGATTTACCTGATCGGGGCGCTGCTGCTGTTCTTCAAGCCGCACAC CCCGACCGCTGGCAAGGTCATGCAGCCAAACACCTCTTCTGTTACGAACGAATAA
Upstream 100 bases:
>100_bases AACTACACGCATTCAAGAATGAGTATCATTATGTTACGCAGTGTTTCCGGCCTATGGCTCGTCGAGACACATTCACCCTA CAGCTTTGACCCGGTGAGAT
Downstream 100 bases:
>100_bases GGGCCTCCATGTCTAACCGTCCCTCAGGGCCTTCCGGGAAAGCCCGGCCGCCCCGTGTCCTGCGATTGGCAGTCGCCGGC TCAGTGATCCTGATGATCGC
Product: Iron permease FTR1
Products: NA
Alternate protein names: Fe(2+) ion permease efeU; Ferrous iron uptake protein [H]
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MLVPFLIMLREGIEAALIVGIIASYLKQTGRGEWMPAVWIGVFLAVALSLFVGGGLELMSAEFPQKQQELFEGIVGLIAV GILSSMVFWMRKVARSIKHALHESLDAALTGSKNQTYALIAMVFFAVAREGLETVFFLLAVFQQSEGSGAPLGALLGLLL AVGFGVAIYSGSMRLNLSLFFRWTGLFILVVAAGILANSVQALHEAGVWNHLQEVVFDISARLPMDGPAGSVLAGMFGYQ DAPTVSTLSAYLIYLIGALLLFFKPHTPTAGKVMQPNTSSVTNE
Sequences:
>Translated_284_residues MLVPFLIMLREGIEAALIVGIIASYLKQTGRGEWMPAVWIGVFLAVALSLFVGGGLELMSAEFPQKQQELFEGIVGLIAV GILSSMVFWMRKVARSIKHALHESLDAALTGSKNQTYALIAMVFFAVAREGLETVFFLLAVFQQSEGSGAPLGALLGLLL AVGFGVAIYSGSMRLNLSLFFRWTGLFILVVAAGILANSVQALHEAGVWNHLQEVVFDISARLPMDGPAGSVLAGMFGYQ DAPTVSTLSAYLIYLIGALLLFFKPHTPTAGKVMQPNTSSVTNE >Mature_284_residues MLVPFLIMLREGIEAALIVGIIASYLKQTGRGEWMPAVWIGVFLAVALSLFVGGGLELMSAEFPQKQQELFEGIVGLIAV GILSSMVFWMRKVARSIKHALHESLDAALTGSKNQTYALIAMVFFAVAREGLETVFFLLAVFQQSEGSGAPLGALLGLLL AVGFGVAIYSGSMRLNLSLFFRWTGLFILVVAAGILANSVQALHEAGVWNHLQEVVFDISARLPMDGPAGSVLAGMFGYQ DAPTVSTLSAYLIYLIGALLLFFKPHTPTAGKVMQPNTSSVTNE
Specific function: Functions only as an uptake system for Fe(2+) ion acquisition [H]
COG id: COG0672
COG function: function code P; High-affinity Fe2+/Pb2+ permease
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oxidase-dependent Fe transporter (OFeT) (TC 9.A.10.1) family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6320993, Length=289, Percent_Identity=25.6055363321799, Blast_Score=77, Evalue=4e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004923 [H]
Pfam domain/function: PF03239 FTR1 [H]
EC number: NA
Molecular weight: Translated: 30441; Mature: 30441
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVPFLIMLREGIEAALIVGIIASYLKQTGRGEWMPAVWIGVFLAVALSLFVGGGLELMS CHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHH AEFPQKQQELFEGIVGLIAVGILSSMVFWMRKVARSIKHALHESLDAALTGSKNQTYALI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH AMVFFAVAREGLETVFFLLAVFQQSEGSGAPLGALLGLLLAVGFGVAIYSGSMRLNLSLF HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEHHHH FRWTGLFILVVAAGILANSVQALHEAGVWNHLQEVVFDISARLPMDGPAGSVLAGMFGYQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCC DAPTVSTLSAYLIYLIGALLLFFKPHTPTAGKVMQPNTSSVTNE CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLVPFLIMLREGIEAALIVGIIASYLKQTGRGEWMPAVWIGVFLAVALSLFVGGGLELMS CHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHH AEFPQKQQELFEGIVGLIAVGILSSMVFWMRKVARSIKHALHESLDAALTGSKNQTYALI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH AMVFFAVAREGLETVFFLLAVFQQSEGSGAPLGALLGLLLAVGFGVAIYSGSMRLNLSLF HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEHHHH FRWTGLFILVVAAGILANSVQALHEAGVWNHLQEVVFDISARLPMDGPAGSVLAGMFGYQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCC DAPTVSTLSAYLIYLIGALLLFFKPHTPTAGKVMQPNTSSVTNE CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA