| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is ada [H]
Identifier: 66046594
GI number: 66046594
Start: 4023774
End: 4024928
Strand: Reverse
Name: ada [H]
Synonym: Psyr_3365
Alternate gene names: 66046594
Gene position: 4024928-4023774 (Counterclockwise)
Preceding gene: 66046595
Following gene: 66046592
Centisome position: 66.05
GC content: 61.56
Gene sequence:
>1155_bases GTGGCTCCGACAGGCGCAGGCTTATCGAAACTCAAGGCAGGCTCGACCATGGACAGCACAGAAGGCACTCAAACGGCACG CGCCCTGCGCACTGAAGACGACCCGCGCTGGGACATCCTGGTCAATCGGCGTTCACACGCCGGCGCTGACTTCGTTTATG GCGTGCTGACCACCGGCATCTATTGCAAGCCGTGCAGCCCGACCCGGCTGCCGCGTCCGGAAAACGTGGTGTTTTTTGAT AGTGCGCACGACGCCGAGGCCGCCGGGTTTCGCCCATCCCTGCGCAATGCCGGCGACTCAAACGCGCTGCAACGCAAGCA CGCAGAAGTCGTTGCCCAGGCCTGCAGACTGATCGATGCCGCCGATTCGATGCTCAATCTGACCGCGCTTGCGGAGCAGG TCGGGATCAGCGGTTTTCATTTCCACCGCATTTTCAAAAGACTGACCGGCTTGACGCCCAGGGCCTACAGTGTCGCCTCG TTACGTTCGCGGGTGAAAGTCCAGCTCTCACAGAGCGTAAGCATTACCCATGCGTTGTACGAGGCGGGCTACAACGCCAA CAGTCGTTTCTACGAGGCTTCGCAGGACATGCTCGGCATGAAACCTTCCGAATACCGCGCGGGCGGCGCCAATGTCGATA TCAGGTTCGCTCTGGGTGAAAGTTCGCTGGGTTCGATTCTGGTGGCCACCAGCAGCAAGGGTATCTGTGCGATTTCGCTC GGTGATGACCCGCATGCGCTGATCGAAGCTTTCCAGGACCAGTTTCCCAACGCCAACCTGATCGGTGCAGACGCCGCGTT CGAACAACTGGTTGCCGAGGTCGTGGGTTTTGTCGAATCACCTGCGACCGGCCTGGCGCTGCCATTGGATATCCGCGGCA CGGTGTTTCAGGAGCGGGTCTGGCAGGCGCTGAGGGACATTCCTGCCGGATCGACGGCCACCTATACGCAGATCGCGACG CAGATAGGACTGCCCAGTGCAGTCCGTGCGGTGGCCAACGCCTGCGGTGCGAACAAGCTCGCGGTGGCGATTCCCTGCCA CCGCGTGGTGCGCAGCGATGGATCGTTGTCGGGCTACCGCTGGGGCGTCGAGCGCAAGCGCAAGCTGCTTGAAATCGAAG CGGCCGAAGGGGCAGGGCTGTTTTCAGGGCGTTGA
Upstream 100 bases:
>100_bases GCCTTACCGAACCATCGCTGCCTGGTATCTGTGGCGAGTACCGGTCGATTTCAGCGAGCTCGGCTCATCTCGAATTTGAA AGCAAGACTCGGAGTGCCCA
Downstream 100 bases:
>100_bases GCAGCAGCCCATTTTCTGCAGAATCCGATAGGCCAGTTTCACCCGCTCCTCGTTCGGGTAGTTTTTGTTGGCGAGGATGG CAATCCCCAACTGCTGCTCC
Product: methylated-DNA-[protein]-cysteine S-methyltransferase
Products: NA
Alternate protein names: Regulatory protein of adaptative response; O-6-methylguanine-DNA alkyltransferase [H]
Number of amino acids: Translated: 384; Mature: 383
Protein sequence:
>384_residues MAPTGAGLSKLKAGSTMDSTEGTQTARALRTEDDPRWDILVNRRSHAGADFVYGVLTTGIYCKPCSPTRLPRPENVVFFD SAHDAEAAGFRPSLRNAGDSNALQRKHAEVVAQACRLIDAADSMLNLTALAEQVGISGFHFHRIFKRLTGLTPRAYSVAS LRSRVKVQLSQSVSITHALYEAGYNANSRFYEASQDMLGMKPSEYRAGGANVDIRFALGESSLGSILVATSSKGICAISL GDDPHALIEAFQDQFPNANLIGADAAFEQLVAEVVGFVESPATGLALPLDIRGTVFQERVWQALRDIPAGSTATYTQIAT QIGLPSAVRAVANACGANKLAVAIPCHRVVRSDGSLSGYRWGVERKRKLLEIEAAEGAGLFSGR
Sequences:
>Translated_384_residues MAPTGAGLSKLKAGSTMDSTEGTQTARALRTEDDPRWDILVNRRSHAGADFVYGVLTTGIYCKPCSPTRLPRPENVVFFD SAHDAEAAGFRPSLRNAGDSNALQRKHAEVVAQACRLIDAADSMLNLTALAEQVGISGFHFHRIFKRLTGLTPRAYSVAS LRSRVKVQLSQSVSITHALYEAGYNANSRFYEASQDMLGMKPSEYRAGGANVDIRFALGESSLGSILVATSSKGICAISL GDDPHALIEAFQDQFPNANLIGADAAFEQLVAEVVGFVESPATGLALPLDIRGTVFQERVWQALRDIPAGSTATYTQIAT QIGLPSAVRAVANACGANKLAVAIPCHRVVRSDGSLSGYRWGVERKRKLLEIEAAEGAGLFSGR >Mature_383_residues APTGAGLSKLKAGSTMDSTEGTQTARALRTEDDPRWDILVNRRSHAGADFVYGVLTTGIYCKPCSPTRLPRPENVVFFDS AHDAEAAGFRPSLRNAGDSNALQRKHAEVVAQACRLIDAADSMLNLTALAEQVGISGFHFHRIFKRLTGLTPRAYSVASL RSRVKVQLSQSVSITHALYEAGYNANSRFYEASQDMLGMKPSEYRAGGANVDIRFALGESSLGSILVATSSKGICAISLG DDPHALIEAFQDQFPNANLIGADAAFEQLVAEVVGFVESPATGLALPLDIRGTVFQERVWQALRDIPAGSTATYTQIATQ IGLPSAVRAVANACGANKLAVAIPCHRVVRSDGSLSGYRWGVERKRKLLEIEAAEGAGLFSGR
Specific function: The methylated ADA protein acts as a positive regulator of its own synthesis, as well as that of other proteins. The transcription-activating function of the ADA protein resides in its N-terminus. It activates the transcription of alkA, alkB and aidB [H]
COG id: COG0350
COG function: function code L; Methylated DNA-protein cysteine methyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1788542, Length=342, Percent_Identity=47.953216374269, Blast_Score=328, Evalue=3e-91, Organism=Escherichia coli, GI1787596, Length=88, Percent_Identity=46.5909090909091, Blast_Score=89, Evalue=7e-19, Organism=Caenorhabditis elegans, GI115533070, Length=129, Percent_Identity=41.8604651162791, Blast_Score=107, Evalue=1e-23, Organism=Caenorhabditis elegans, GI115533068, Length=130, Percent_Identity=42.3076923076923, Blast_Score=106, Evalue=2e-23, Organism=Saccharomyces cerevisiae, GI6320001, Length=170, Percent_Identity=32.3529411764706, Blast_Score=92, Evalue=9e-20, Organism=Drosophila melanogaster, GI17137554, Length=126, Percent_Identity=42.8571428571429, Blast_Score=81, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004026 - InterPro: IPR016221 - InterPro: IPR009057 - InterPro: IPR012287 - InterPro: IPR018062 - InterPro: IPR018060 - InterPro: IPR001497 - InterPro: IPR014048 - InterPro: IPR008332 - InterPro: IPR011991 [H]
Pfam domain/function: PF02805 Ada_Zn_binding; PF01035 DNA_binding_1; PF00165 HTH_AraC; PF02870 Methyltransf_1N [H]
EC number: =2.1.1.63 [H]
Molecular weight: Translated: 41026; Mature: 40895
Theoretical pI: Translated: 8.13; Mature: 8.13
Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2 ; PS00374 MGMT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPTGAGLSKLKAGSTMDSTEGTQTARALRTEDDPRWDILVNRRSHAGADFVYGVLTTGI CCCCCCCHHHHCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHCCE YCKPCSPTRLPRPENVVFFDSAHDAEAAGFRPSLRNAGDSNALQRKHAEVVAQACRLIDA EECCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHH ADSMLNLTALAEQVGISGFHFHRIFKRLTGLTPRAYSVASLRSRVKVQLSQSVSITHALY HHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHH EAGYNANSRFYEASQDMLGMKPSEYRAGGANVDIRFALGESSLGSILVATSSKGICAISL HCCCCCCCCHHHCCHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEECCCCEEEEEE GDDPHALIEAFQDQFPNANLIGADAAFEQLVAEVVGFVESPATGLALPLDIRGTVFQERV CCCHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHH WQALRDIPAGSTATYTQIATQIGLPSAVRAVANACGANKLAVAIPCHRVVRSDGSLSGYR HHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEECHHHHHHCCCCCCCEE WGVERKRKLLEIEAAEGAGLFSGR CCHHHHHHEEEEECCCCCCCCCCC >Mature Secondary Structure APTGAGLSKLKAGSTMDSTEGTQTARALRTEDDPRWDILVNRRSHAGADFVYGVLTTGI CCCCCCHHHHCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHCCE YCKPCSPTRLPRPENVVFFDSAHDAEAAGFRPSLRNAGDSNALQRKHAEVVAQACRLIDA EECCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHH ADSMLNLTALAEQVGISGFHFHRIFKRLTGLTPRAYSVASLRSRVKVQLSQSVSITHALY HHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHH EAGYNANSRFYEASQDMLGMKPSEYRAGGANVDIRFALGESSLGSILVATSSKGICAISL HCCCCCCCCHHHCCHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEECCCCEEEEEE GDDPHALIEAFQDQFPNANLIGADAAFEQLVAEVVGFVESPATGLALPLDIRGTVFQERV CCCHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHH WQALRDIPAGSTATYTQIATQIGLPSAVRAVANACGANKLAVAIPCHRVVRSDGSLSGYR HHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEECHHHHHHCCCCCCCEE WGVERKRKLLEIEAAEGAGLFSGR CCHHHHHHEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2987251; 3887409; 9097040; 9278503; 2982792; 3536913; 3009022; 3529081; 1581309; 8202360; 8500619; 8156986 [H]