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The map label for this gene is 66046583

Identifier: 66046583

GI number: 66046583

Start: 4011936

End: 4012505

Strand: Direct

Name: 66046583

Synonym: Psyr_3354

Alternate gene names: NA

Gene position: 4011936-4012505 (Clockwise)

Preceding gene: 66046582

Following gene: 66046587

Centisome position: 65.84

GC content: 58.07

Gene sequence:

>570_bases
ATGAAGCATCTGATCTATGGCTTGCTGCTGTTTGCCGCAGCCGCAAACGCCACACCACCGACACCCACTCCCACTCCAGC
GCCTTCAGAGCTGAGCGCCGAACAGACTGCCAGCCAGCTGCGCACGCTGTTTTTCGATGCCTCCCGTGAAGGCAACAACC
CGATGCTGGACACCTTTATCGAAGCTCATTACGACCTCAATATCCGTGACGAACAAGGCTATACCGGTCTGATTCTGGCG
GCCTATCACGGCCATGAAGACTCGGTGATACGCCTGATAGACGCCGGAGCAGACCCCTGCGCCAAGGACAATCGCGGCAA
TACGGCGCTGATGGGTGCGATTTTCAAGGGTGAACTGAGCATCGCCAAGCGTCTGGTGCAGGCAGATTGTGGTGCGAACC
TCACCAACAATGCCGGACAGACCGCCGCCATGTACGCCGCCTTGTTCAAACGCACTGAAGTGCTCAAGGAACTGACCGAC
AAGGGCGCAGACCTGAGCATTCGTGACAGCATGGGCAATGACGTGGAAGGCTTGTCCAAAGGTGAATTCCAGGCGCCGCC
CACCCGCTGA

Upstream 100 bases:

>100_bases
AGCAAGGTCAAGTCCCTGGCTGCAAGCCTCAAGGACTGATGATCTGATACCCCGTCCCGGTGCTCTGTCGCCGGGACGGT
TCCCGTCAGGAGAACGCTCC

Downstream 100 bases:

>100_bases
CGGCTGCTGGAATCAGTCTTCGCGCTCGATCATTTCGTAGATGCGGCTGGCAAACGCTTCCATGGTGAAGGGTTTGGTGA
GCACCCACATGCCCGGATCC

Product: ankyrin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MKHLIYGLLLFAAAANATPPTPTPTPAPSELSAEQTASQLRTLFFDASREGNNPMLDTFIEAHYDLNIRDEQGYTGLILA
AYHGHEDSVIRLIDAGADPCAKDNRGNTALMGAIFKGELSIAKRLVQADCGANLTNNAGQTAAMYAALFKRTEVLKELTD
KGADLSIRDSMGNDVEGLSKGEFQAPPTR

Sequences:

>Translated_189_residues
MKHLIYGLLLFAAAANATPPTPTPTPAPSELSAEQTASQLRTLFFDASREGNNPMLDTFIEAHYDLNIRDEQGYTGLILA
AYHGHEDSVIRLIDAGADPCAKDNRGNTALMGAIFKGELSIAKRLVQADCGANLTNNAGQTAAMYAALFKRTEVLKELTD
KGADLSIRDSMGNDVEGLSKGEFQAPPTR
>Mature_189_residues
MKHLIYGLLLFAAAANATPPTPTPTPAPSELSAEQTASQLRTLFFDASREGNNPMLDTFIEAHYDLNIRDEQGYTGLILA
AYHGHEDSVIRLIDAGADPCAKDNRGNTALMGAIFKGELSIAKRLVQADCGANLTNNAGQTAAMYAALFKRTEVLKELTD
KGADLSIRDSMGNDVEGLSKGEFQAPPTR

Specific function: Unknown

COG id: COG0666

COG function: function code R; FOG: Ankyrin repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 ANK repeats [H]

Homologues:

Organism=Homo sapiens, GI225543461, Length=129, Percent_Identity=31.7829457364341, Blast_Score=67, Evalue=7e-12,
Organism=Homo sapiens, GI225543463, Length=129, Percent_Identity=31.7829457364341, Blast_Score=67, Evalue=8e-12,
Organism=Homo sapiens, GI157739945, Length=129, Percent_Identity=33.3333333333333, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI89363047, Length=129, Percent_Identity=31.0077519379845, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI62988328, Length=126, Percent_Identity=31.7460317460317, Blast_Score=65, Evalue=5e-11,
Organism=Homo sapiens, GI268607595, Length=126, Percent_Identity=31.7460317460317, Blast_Score=64, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002110
- InterPro:   IPR020683 [H]

Pfam domain/function: PF00023 Ank [H]

EC number: NA

Molecular weight: Translated: 20269; Mature: 20269

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHLIYGLLLFAAAANATPPTPTPTPAPSELSAEQTASQLRTLFFDASREGNNPMLDTFI
CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHH
EAHYDLNIRDEQGYTGLILAAYHGHEDSVIRLIDAGADPCAKDNRGNTALMGAIFKGELS
HHHCCCCEECCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEEHHHHHHHHH
IAKRLVQADCGANLTNNAGQTAAMYAALFKRTEVLKELTDKGADLSIRDSMGNDVEGLSK
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCC
GEFQAPPTR
CCCCCCCCC
>Mature Secondary Structure
MKHLIYGLLLFAAAANATPPTPTPTPAPSELSAEQTASQLRTLFFDASREGNNPMLDTFI
CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHH
EAHYDLNIRDEQGYTGLILAAYHGHEDSVIRLIDAGADPCAKDNRGNTALMGAIFKGELS
HHHCCCCEECCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEEHHHHHHHHH
IAKRLVQADCGANLTNNAGQTAAMYAALFKRTEVLKELTDKGADLSIRDSMGNDVEGLSK
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCC
GEFQAPPTR
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]