| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
Click here to switch to the map view.
The map label for this gene is 66046571
Identifier: 66046571
GI number: 66046571
Start: 3997658
End: 3997918
Strand: Reverse
Name: 66046571
Synonym: Psyr_3342
Alternate gene names: NA
Gene position: 3997918-3997658 (Counterclockwise)
Preceding gene: 66046572
Following gene: 66046570
Centisome position: 65.61
GC content: 58.24
Gene sequence:
>261_bases ATGATCGCGAGTGGACTGTCCGAGTTAGAACTCAGGAGCATTGTGGAACGTGCGTTTCTGCCGTTGCGTTGCACCTGTAC GATTGCCAACGAGCAGATGAATGTGCAGATAAGCGACCCGGTATCGGGGCGCACCCAGCGTCAGAAGAGCCTGCCGCTCA GCCGTATCAATACGGTTCGGGACATCTCTGCGCTGGTGGCCGAGCTGCGTGAAGAGCCGGTGACGACTCGAGTAGCGAAA GCGTACTACAGCGCTGCCTGA
Upstream 100 bases:
>100_bases GCGGGCTGGCGCGTGCCGTTTTTAAAAAGTCATCAACAATAAAAATTATCAAAATTTTGTCACTGCCGGGACATGCTTAC ACACATAAGGAGATAAAGAA
Downstream 100 bases:
>100_bases TACGGCTGCACCCCGCTGATGCCGCGGCATCACGTTACAGGGCCCTGATCATCGCTGATCGGGGCCTTGTCATTTTTATG GGCGCTGTGGCGGCCTCATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 86; Mature: 86
Protein sequence:
>86_residues MIASGLSELELRSIVERAFLPLRCTCTIANEQMNVQISDPVSGRTQRQKSLPLSRINTVRDISALVAELREEPVTTRVAK AYYSAA
Sequences:
>Translated_86_residues MIASGLSELELRSIVERAFLPLRCTCTIANEQMNVQISDPVSGRTQRQKSLPLSRINTVRDISALVAELREEPVTTRVAK AYYSAA >Mature_86_residues MIASGLSELELRSIVERAFLPLRCTCTIANEQMNVQISDPVSGRTQRQKSLPLSRINTVRDISALVAELREEPVTTRVAK AYYSAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9535; Mature: 9535
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIASGLSELELRSIVERAFLPLRCTCTIANEQMNVQISDPVSGRTQRQKSLPLSRINTVR CCCCCHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEECCCCCCCHHHHHCCCHHHHHHHH DISALVAELREEPVTTRVAKAYYSAA HHHHHHHHHHHCCHHHHHHHHHHHCC >Mature Secondary Structure MIASGLSELELRSIVERAFLPLRCTCTIANEQMNVQISDPVSGRTQRQKSLPLSRINTVR CCCCCHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEECCCCCCCHHHHHCCCHHHHHHHH DISALVAELREEPVTTRVAKAYYSAA HHHHHHHHHHHCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA