| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
Click here to switch to the map view.
The map label for this gene is 66046554
Identifier: 66046554
GI number: 66046554
Start: 3976500
End: 3977795
Strand: Reverse
Name: 66046554
Synonym: Psyr_3325
Alternate gene names: NA
Gene position: 3977795-3976500 (Counterclockwise)
Preceding gene: 66046555
Following gene: 66046552
Centisome position: 65.28
GC content: 61.96
Gene sequence:
>1296_bases ATGACTACCGCGCTCAATCGTCGTAGCTGGGTCGAATCTGCCAACGGGCATGCCGATTTCCCGCTGCAGAACCTGCCGTT GGGCGTGTTCAGCCATGGCCAGACCTGCCCGCGTGGCGGAGTGGCCATAGGCGACAGGATTTTCGATCTGCGCGCAGCAA CAGAGGCCGGGGTGTTTCAGGCACCGGCCGCCGAGGTTGCCGAGGTTGCCAGCCGCGACCAGCTCAATGATTTTCTTGCA CTGGGTGCCGCTGCCCGCCAGGCATTGCGCGCCGCCTTGTTGCAGTTGCTCGATGAAGACAGCCCGCAGCGCGACAGGCT GCAGGGCGTTGCCGGTTTGTTGTTGCCGATGAGTGAGTGCACGTTGCACATGCCCGCTCGGGTGGGTGATTACTCGGACT TCTACGTCGGTATTCATCACGCGCTGAATGTCGGCAAGCTGTTCCGCCCGGACAACCCGCTGCTGCCCAACTACAAATAC GTGCCGATCGGCTATCACGGCAGAGCGTCGACCTTGTGTCCCTCGGGTACGGCTGTGCGGCGCCCCAGCGGACAAACCCT GGCGGCAGGTCAGAACGCTCCTGCTTTCGGTCCCTGCCAACGCCTGGATTACGAACTGGAACTGGGGGTCTGGATCGGGC CGGGGAATGCCCAGGGCGAGTCCATCGGGATCGATCGGGCCGCCGAGCATATTGCCGGGTTCTGCCTGCTCAACGATTGG TCGGCGCGTGACATACAGGCATGGGAATACCAGCCGTTGGGACCGTTTCTGTCCAAGAGTTTTGCCACGACGATATCGCC CTGGGTGGTGACTGCCGAAGCGCTTGAACCGTTTCGTCGTGCCCAACCGCCACGTCCGGACGGCGATCCGCAACCGCTGT CGTATCTGCTCGATGACCACGATCAGCAGGGCGGGGCGCTGGATATCGAGCTGGAAGTGCTATTGCGGACTGCACAGATG AAAGCCGACGGCCTGGCGCCTCACAGGCTGGGTCTGAGCAACTCGCTGAACATGTACTGGACAGTGGCGCAGATGGTTGC GCATCACAGCGTTAACGGCTGCAAATTGCAGCCGGGTGACCTGCTCGGCACCGGTACGTTGTCCGGCCCCCAGGAAGGTC AGTATGGCAGCCTGCTGGAGATGACCGCAGGCGGCAAACAACCGGTCACATTACCCAATGGCGAAGTGCGCATGTTCCTG CAAAGTGGCGACGAAGTGATTCTGCGTGCCCGTTGTCATCGCGAAGGGCACGTCTCGATTGGCTTTGGTGAGTGCCGGGG CGTTGTGCTGGACTGA
Upstream 100 bases:
>100_bases TGCGCCCCAGTCGTCACGCGCTCGACTGTCCGCAACTGCAAACCGATTACGATGCCTGCTGGAAGGATATGGCCAGGACG TTCACCCAGGAGCCACGCTG
Downstream 100 bases:
>100_bases CCGCTTCAGCGTCAGCGGGTTATTTCGTACCAGCCGAGAAACATGTCCAGCGTCGACTCGACCACCGTGTGCTGCTCCTC GGGGGTAAGCAATGCAGCAC
Product: fumarylacetoacetase
Products: acetoacetate; fumarate
Alternate protein names: Fumarylacetoacetate Hydrolase; Hydroxylase; Fumarylacetoacetate Hydrolase Family Protein; Fumarylacetoacetase Hydrolase; LOW QUALITY PROTEIN Fumarylacetoacetase
Number of amino acids: Translated: 431; Mature: 430
Protein sequence:
>431_residues MTTALNRRSWVESANGHADFPLQNLPLGVFSHGQTCPRGGVAIGDRIFDLRAATEAGVFQAPAAEVAEVASRDQLNDFLA LGAAARQALRAALLQLLDEDSPQRDRLQGVAGLLLPMSECTLHMPARVGDYSDFYVGIHHALNVGKLFRPDNPLLPNYKY VPIGYHGRASTLCPSGTAVRRPSGQTLAAGQNAPAFGPCQRLDYELELGVWIGPGNAQGESIGIDRAAEHIAGFCLLNDW SARDIQAWEYQPLGPFLSKSFATTISPWVVTAEALEPFRRAQPPRPDGDPQPLSYLLDDHDQQGGALDIELEVLLRTAQM KADGLAPHRLGLSNSLNMYWTVAQMVAHHSVNGCKLQPGDLLGTGTLSGPQEGQYGSLLEMTAGGKQPVTLPNGEVRMFL QSGDEVILRARCHREGHVSIGFGECRGVVLD
Sequences:
>Translated_431_residues MTTALNRRSWVESANGHADFPLQNLPLGVFSHGQTCPRGGVAIGDRIFDLRAATEAGVFQAPAAEVAEVASRDQLNDFLA LGAAARQALRAALLQLLDEDSPQRDRLQGVAGLLLPMSECTLHMPARVGDYSDFYVGIHHALNVGKLFRPDNPLLPNYKY VPIGYHGRASTLCPSGTAVRRPSGQTLAAGQNAPAFGPCQRLDYELELGVWIGPGNAQGESIGIDRAAEHIAGFCLLNDW SARDIQAWEYQPLGPFLSKSFATTISPWVVTAEALEPFRRAQPPRPDGDPQPLSYLLDDHDQQGGALDIELEVLLRTAQM KADGLAPHRLGLSNSLNMYWTVAQMVAHHSVNGCKLQPGDLLGTGTLSGPQEGQYGSLLEMTAGGKQPVTLPNGEVRMFL QSGDEVILRARCHREGHVSIGFGECRGVVLD >Mature_430_residues TTALNRRSWVESANGHADFPLQNLPLGVFSHGQTCPRGGVAIGDRIFDLRAATEAGVFQAPAAEVAEVASRDQLNDFLAL GAAARQALRAALLQLLDEDSPQRDRLQGVAGLLLPMSECTLHMPARVGDYSDFYVGIHHALNVGKLFRPDNPLLPNYKYV PIGYHGRASTLCPSGTAVRRPSGQTLAAGQNAPAFGPCQRLDYELELGVWIGPGNAQGESIGIDRAAEHIAGFCLLNDWS ARDIQAWEYQPLGPFLSKSFATTISPWVVTAEALEPFRRAQPPRPDGDPQPLSYLLDDHDQQGGALDIELEVLLRTAQMK ADGLAPHRLGLSNSLNMYWTVAQMVAHHSVNGCKLQPGDLLGTGTLSGPQEGQYGSLLEMTAGGKQPVTLPNGEVRMFLQ SGDEVILRARCHREGHVSIGFGECRGVVLD
Specific function: Unknown
COG id: COG0179
COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4557587, Length=417, Percent_Identity=47.0023980815348, Blast_Score=362, Evalue=1e-100, Organism=Caenorhabditis elegans, GI17568863, Length=419, Percent_Identity=48.4486873508353, Blast_Score=369, Evalue=1e-102, Organism=Drosophila melanogaster, GI24657182, Length=417, Percent_Identity=45.8033573141487, Blast_Score=355, Evalue=5e-98,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.7.1.2
Molecular weight: Translated: 46493; Mature: 46362
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTALNRRSWVESANGHADFPLQNLPLGVFSHGQTCPRGGVAIGDRIFDLRAATEAGVFQ CCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEHHHHCCCCCCC APAAEVAEVASRDQLNDFLALGAAARQALRAALLQLLDEDSPQRDRLQGVAGLLLPMSEC CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHC TLHMPARVGDYSDFYVGIHHALNVGKLFRPDNPLLPNYKYVPIGYHGRASTLCPSGTAVR CEECCCCCCCCCHHHHHHHHHHCCCCEECCCCCCCCCEEEEEECCCCCCCCCCCCCCEEE RPSGQTLAAGQNAPAFGPCQRLDYELELGVWIGPGNAQGESIGIDRAAEHIAGFCLLNDW CCCCCEEECCCCCCCCCCHHHCCEEEEEEEEECCCCCCCCCCCHHHHHHHHEEEEEECCC SARDIQAWEYQPLGPFLSKSFATTISPWVVTAEALEPFRRAQPPRPDGDPQPLSYLLDDH CCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCCCCCHHHHHHCCC DQQGGALDIELEVLLRTAQMKADGLAPHRLGLSNSLNMYWTVAQMVAHHSVNGCKLQPGD CCCCCEEEEEHHHHHHHHHHHCCCCCCHHCCCCCCCHHHHHHHHHHHHCCCCCCEECCCC LLGTGTLSGPQEGQYGSLLEMTAGGKQPVTLPNGEVRMFLQSGDEVILRARCHREGHVSI EEECCCCCCCCCCCCCCEEEECCCCCCCEECCCCCEEEEEECCCEEEEEEECCCCCCEEE GFGECRGVVLD EHHHCCCEECC >Mature Secondary Structure TTALNRRSWVESANGHADFPLQNLPLGVFSHGQTCPRGGVAIGDRIFDLRAATEAGVFQ CCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEHHHHCCCCCCC APAAEVAEVASRDQLNDFLALGAAARQALRAALLQLLDEDSPQRDRLQGVAGLLLPMSEC CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHC TLHMPARVGDYSDFYVGIHHALNVGKLFRPDNPLLPNYKYVPIGYHGRASTLCPSGTAVR CEECCCCCCCCCHHHHHHHHHHCCCCEECCCCCCCCCEEEEEECCCCCCCCCCCCCCEEE RPSGQTLAAGQNAPAFGPCQRLDYELELGVWIGPGNAQGESIGIDRAAEHIAGFCLLNDW CCCCCEEECCCCCCCCCCHHHCCEEEEEEEEECCCCCCCCCCCHHHHHHHHEEEEEECCC SARDIQAWEYQPLGPFLSKSFATTISPWVVTAEALEPFRRAQPPRPDGDPQPLSYLLDDH CCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCCCCCHHHHHHCCC DQQGGALDIELEVLLRTAQMKADGLAPHRLGLSNSLNMYWTVAQMVAHHSVNGCKLQPGD CCCCCEEEEEHHHHHHHHHHHCCCCCCHHCCCCCCCHHHHHHHHHHHHCCCCCCEECCCC LLGTGTLSGPQEGQYGSLLEMTAGGKQPVTLPNGEVRMFLQSGDEVILRARCHREGHVSI EEECCCCCCCCCCCCCCEEEECCCCCCCEECCCCCEEEEEECCCEEEEEEECCCCCCEEE GFGECRGVVLD EHHHCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 4-fumarylacetoacetate; H2O
Specific reaction: 4-fumarylacetoacetate + H2O = acetoacetate + fumarate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA