Click here to switch to the map view.

The map label for this gene is 66046533

Identifier: 66046533

GI number: 66046533

Start: 3953610

End: 3955601

Strand: Direct

Name: 66046533

Synonym: Psyr_3304

Alternate gene names: NA

Gene position: 3953610-3955601 (Clockwise)

Preceding gene: 66046532

Following gene: 66046534

Centisome position: 64.88

GC content: 59.59

Gene sequence:

>1992_bases
ATGATCAACATCCGCTCATTCCGCGACTTGCTGCGCCTGCTGTTCATCTTCCTGCGCGAAGTCAGGATTACCGTGCTGGC
GACGTTCGTCATCATTCTTCTGGGCGCGTTTCTGCTCCCTAACCGCTATGAGTCCACCGCCCTGTTGCTGGTCAAGCCCG
GCCGCGACAGCAGCACTGTGCCAATCGAGTTGTCCGACCGACAGGCCATCGTGATACCGAGCGGCCTGCGCGATCCGCTG
CTCGACGAGGAGCGCATGCTCAGCGGGCGGCCGATCATGCGTGCCGTGTCCGAGAAATACCTCGCCGAGCTGTCCATGGT
GCCGCCTGAAACCGGCGTTCTGGCCTCGGTGAAGAACGGCATCAAGACCGTCGTCGGAGCGCTGGTCAACGGCGTGCGCA
GCGTTCTGCAATTCATCGGGCTGGTGGAACACCGCTCCCAGGCCGAACGTCTGGCCGAGGATCTGGAGAAAAACTTCAAG
GTCAGCCATGAGCCTGGCTCATCAGTGATGGAGCTGAGGTTTACCTGGAGCGACCCGGAAGTCGCGCAGACCGTGCTCAG
GACCTGGATCACCGAGTACCAGACGCAGCGCACCAAGACACTGGGCCGGGTCAGCCTGTACGCGTTCTACGAAGCGGAAG
TGAAGACGACCGGTGCGAACATCATCGAGTACAAGAAGCAAATTCAGAACTACCTGAACCAGTTGAGCGCGGTAAGTATT
TCCCAGCGTCTGGCCGATACCTCGCAGGCGCTCAACGATCTGCGCACCGAGCGCAACAACACCACCCGCTCGATTGCCTC
GACCAAGGCAGGTCTGGACCTGCTGAAGAAACAACTGGCAGAGCAGCCAAAGACCGTCTCGGCAGGCCGCGAACTGGCCC
TCAACCCCAATCGCCAGGACTTGCAGAACCGCATCAACGGCAAGGAAGTGGAGCGTCAGGAAATGCTTCGCTCATTCAAG
GACGAGGCGCCACCGATTCGTGCGATCAACGAGGAAGTCAGTAACCTCAAAAAGCTGCTCAAGGAACAGGACGCCACCGT
ACAGCGTTCCGAAAGCATCACGCCCAACCCGATCTACAACCGCATGCAGAACGTGTACGCCGACCAGCAGACCAGCTACG
CGCGCCTGCAAACCCAGTTCATCCAGCAGAACGAGCAAATCGCGCAACTGGAACGCGACCGCCAGCAGGCACTGAATCTG
GAGCCGGAACTGTCACGCCTGCAGAACGAGCTGGATGCGGCAGAAAAAAGCTATGCACTGTACAAAAACAGCCTGGAAAA
ATCGCGTATCGACCGTGAACTGGACAACAGCCAGATCAGTAATATCGCGACCATCGAGGAGGCGACCTTCAACCCCAGCC
GGGTATTCCCGAAAAGCCTGCTGATGCTGTTTCTGGCGTTCCCGCTGAGCGTCGTGGTCGGTGCCGTGGCGCTGTACTTC
TTCTACCTGCTGGACCAGCGCATTCATGACGGCGACAAGATCGAAAGCAGCTTCGGTGTTCCGGTCTGGACCAGCCTCCC
CGACCTGGAACGTGCCCAGGAACGCAGTGCTGCCCTCACCTCGAACCTGCATCGGGTGTACGGCATTCTGCCGCTGGACC
AGGTAGAAGAGCGCGGGCTGACCATCGGTTTTACTTCGGTCAAGTACGGGGCCGGCGTGTCGTTCGTGATCGCGCGCTTG
AGCGCGCTACTGATCGAACAGGGCCATCGGGTACGCACCGAAGGCCGCAGTCCGGCCATTCCGGGCGAAATTGTGCTGAT
CAACGCTTCGGCGCTGTCGGCGAACCAGGATGCCTTCGTGCTGTTGCGCAAGGCTGACCTGATCGTGCTGGTGGTTCGCG
CCCAGGACACCACGGTGCCGATGCTGGAAGACACGCTGAACAACCTCAACACCGCGTTCAAGAAAGTCGACGGCATCATC
ATCAACCGTCGTCGCTTCGAAGTGCCTGAAAAGGTCCTGAGTTTTCTCAAGCGGATCGGGAGCCGAGGCTGA

Upstream 100 bases:

>100_bases
TATCCCTGTATTTCAACCAGTTGATCCCCTTCGCGAAGTCGATCGGCCTGGGCCTGAACTACGAGCTGCGCAACAACAAT
TAATTGTCAGGGAAACAGAC

Downstream 100 bases:

>100_bases
TGCGAATAGCGTTGCTTGCGCCGCTGCCACCCGAACAGAACGGCATCGCCGATTACGCCGGACATCTGCGGCATGCGCTT
GAAGGCCTGGGTCTGCAGAT

Product: lipopolysaccharide biosynthesis

Products: NA

Alternate protein names: Exopolysaccharide Biosythesis Protein; Polysaccharide Chain Length Determinant Protein

Number of amino acids: Translated: 663; Mature: 663

Protein sequence:

>663_residues
MINIRSFRDLLRLLFIFLREVRITVLATFVIILLGAFLLPNRYESTALLLVKPGRDSSTVPIELSDRQAIVIPSGLRDPL
LDEERMLSGRPIMRAVSEKYLAELSMVPPETGVLASVKNGIKTVVGALVNGVRSVLQFIGLVEHRSQAERLAEDLEKNFK
VSHEPGSSVMELRFTWSDPEVAQTVLRTWITEYQTQRTKTLGRVSLYAFYEAEVKTTGANIIEYKKQIQNYLNQLSAVSI
SQRLADTSQALNDLRTERNNTTRSIASTKAGLDLLKKQLAEQPKTVSAGRELALNPNRQDLQNRINGKEVERQEMLRSFK
DEAPPIRAINEEVSNLKKLLKEQDATVQRSESITPNPIYNRMQNVYADQQTSYARLQTQFIQQNEQIAQLERDRQQALNL
EPELSRLQNELDAAEKSYALYKNSLEKSRIDRELDNSQISNIATIEEATFNPSRVFPKSLLMLFLAFPLSVVVGAVALYF
FYLLDQRIHDGDKIESSFGVPVWTSLPDLERAQERSAALTSNLHRVYGILPLDQVEERGLTIGFTSVKYGAGVSFVIARL
SALLIEQGHRVRTEGRSPAIPGEIVLINASALSANQDAFVLLRKADLIVLVVRAQDTTVPMLEDTLNNLNTAFKKVDGII
INRRRFEVPEKVLSFLKRIGSRG

Sequences:

>Translated_663_residues
MINIRSFRDLLRLLFIFLREVRITVLATFVIILLGAFLLPNRYESTALLLVKPGRDSSTVPIELSDRQAIVIPSGLRDPL
LDEERMLSGRPIMRAVSEKYLAELSMVPPETGVLASVKNGIKTVVGALVNGVRSVLQFIGLVEHRSQAERLAEDLEKNFK
VSHEPGSSVMELRFTWSDPEVAQTVLRTWITEYQTQRTKTLGRVSLYAFYEAEVKTTGANIIEYKKQIQNYLNQLSAVSI
SQRLADTSQALNDLRTERNNTTRSIASTKAGLDLLKKQLAEQPKTVSAGRELALNPNRQDLQNRINGKEVERQEMLRSFK
DEAPPIRAINEEVSNLKKLLKEQDATVQRSESITPNPIYNRMQNVYADQQTSYARLQTQFIQQNEQIAQLERDRQQALNL
EPELSRLQNELDAAEKSYALYKNSLEKSRIDRELDNSQISNIATIEEATFNPSRVFPKSLLMLFLAFPLSVVVGAVALYF
FYLLDQRIHDGDKIESSFGVPVWTSLPDLERAQERSAALTSNLHRVYGILPLDQVEERGLTIGFTSVKYGAGVSFVIARL
SALLIEQGHRVRTEGRSPAIPGEIVLINASALSANQDAFVLLRKADLIVLVVRAQDTTVPMLEDTLNNLNTAFKKVDGII
INRRRFEVPEKVLSFLKRIGSRG
>Mature_663_residues
MINIRSFRDLLRLLFIFLREVRITVLATFVIILLGAFLLPNRYESTALLLVKPGRDSSTVPIELSDRQAIVIPSGLRDPL
LDEERMLSGRPIMRAVSEKYLAELSMVPPETGVLASVKNGIKTVVGALVNGVRSVLQFIGLVEHRSQAERLAEDLEKNFK
VSHEPGSSVMELRFTWSDPEVAQTVLRTWITEYQTQRTKTLGRVSLYAFYEAEVKTTGANIIEYKKQIQNYLNQLSAVSI
SQRLADTSQALNDLRTERNNTTRSIASTKAGLDLLKKQLAEQPKTVSAGRELALNPNRQDLQNRINGKEVERQEMLRSFK
DEAPPIRAINEEVSNLKKLLKEQDATVQRSESITPNPIYNRMQNVYADQQTSYARLQTQFIQQNEQIAQLERDRQQALNL
EPELSRLQNELDAAEKSYALYKNSLEKSRIDRELDNSQISNIATIEEATFNPSRVFPKSLLMLFLAFPLSVVVGAVALYF
FYLLDQRIHDGDKIESSFGVPVWTSLPDLERAQERSAALTSNLHRVYGILPLDQVEERGLTIGFTSVKYGAGVSFVIARL
SALLIEQGHRVRTEGRSPAIPGEIVLINASALSANQDAFVLLRKADLIVLVVRAQDTTVPMLEDTLNNLNTAFKKVDGII
INRRRFEVPEKVLSFLKRIGSRG

Specific function: Unknown

COG id: COG3206

COG function: function code M; Uncharacterized protein involved in exopolysaccharide biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 74718; Mature: 74718

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINIRSFRDLLRLLFIFLREVRITVLATFVIILLGAFLLPNRYESTALLLVKPGRDSSTV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCEE
PIELSDRQAIVIPSGLRDPLLDEERMLSGRPIMRAVSEKYLAELSMVPPETGVLASVKNG
EEEECCCEEEEECCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
IKTVVGALVNGVRSVLQFIGLVEHRSQAERLAEDLEKNFKVSHEPGSSVMELRFTWSDPE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCEEEEEEECCCHH
VAQTVLRTWITEYQTQRTKTLGRVSLYAFYEAEVKTTGANIIEYKKQIQNYLNQLSAVSI
HHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
SQRLADTSQALNDLRTERNNTTRSIASTKAGLDLLKKQLAEQPKTVSAGRELALNPNRQD
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCEECCCCHHH
LQNRINGKEVERQEMLRSFKDEAPPIRAINEEVSNLKKLLKEQDATVQRSESITPNPIYN
HHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHH
RMQNVYADQQTSYARLQTQFIQQNEQIAQLERDRQQALNLEPELSRLQNELDAAEKSYAL
HHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
YKNSLEKSRIDRELDNSQISNIATIEEATFNPSRVFPKSLLMLFLAFPLSVVVGAVALYF
HHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHH
FYLLDQRIHDGDKIESSFGVPVWTSLPDLERAQERSAALTSNLHRVYGILPLDQVEERGL
HHHHHHHHCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCC
TIGFTSVKYGAGVSFVIARLSALLIEQGHRVRTEGRSPAIPGEIVLINASALSANQDAFV
EEEEECCCCCCCHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCEEEEECHHCCCCCCCEE
LLRKADLIVLVVRAQDTTVPMLEDTLNNLNTAFKKVDGIIINRRRFEVPEKVLSFLKRIG
EEEECCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCEEECCHHHCCHHHHHHHHHHHC
SRG
CCC
>Mature Secondary Structure
MINIRSFRDLLRLLFIFLREVRITVLATFVIILLGAFLLPNRYESTALLLVKPGRDSSTV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCEE
PIELSDRQAIVIPSGLRDPLLDEERMLSGRPIMRAVSEKYLAELSMVPPETGVLASVKNG
EEEECCCEEEEECCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
IKTVVGALVNGVRSVLQFIGLVEHRSQAERLAEDLEKNFKVSHEPGSSVMELRFTWSDPE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCEEEEEEECCCHH
VAQTVLRTWITEYQTQRTKTLGRVSLYAFYEAEVKTTGANIIEYKKQIQNYLNQLSAVSI
HHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
SQRLADTSQALNDLRTERNNTTRSIASTKAGLDLLKKQLAEQPKTVSAGRELALNPNRQD
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCEECCCCHHH
LQNRINGKEVERQEMLRSFKDEAPPIRAINEEVSNLKKLLKEQDATVQRSESITPNPIYN
HHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHH
RMQNVYADQQTSYARLQTQFIQQNEQIAQLERDRQQALNLEPELSRLQNELDAAEKSYAL
HHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
YKNSLEKSRIDRELDNSQISNIATIEEATFNPSRVFPKSLLMLFLAFPLSVVVGAVALYF
HHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHH
FYLLDQRIHDGDKIESSFGVPVWTSLPDLERAQERSAALTSNLHRVYGILPLDQVEERGL
HHHHHHHHCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCC
TIGFTSVKYGAGVSFVIARLSALLIEQGHRVRTEGRSPAIPGEIVLINASALSANQDAFV
EEEEECCCCCCCHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCEEEEECHHCCCCCCCEE
LLRKADLIVLVVRAQDTTVPMLEDTLNNLNTAFKKVDGIIINRRRFEVPEKVLSFLKRIG
EEEECCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCEEECCHHHCCHHHHHHHHHHHC
SRG
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA