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The map label for this gene is ycbX [H]

Identifier: 66046525

GI number: 66046525

Start: 3944814

End: 3945623

Strand: Reverse

Name: ycbX [H]

Synonym: Psyr_3296

Alternate gene names: 66046525

Gene position: 3945623-3944814 (Counterclockwise)

Preceding gene: 66046526

Following gene: 66046523

Centisome position: 64.75

GC content: 61.48

Gene sequence:

>810_bases
ATGTTACGTCTCAGCTCGCTCTATCGTTTCCCGCTCAAATCCTGCAAGGCCGAGTCGATGCAGCGTGCATCGTTCGATGC
GTTGGGGTTGGCGGGTGATCGACGCTGGATGCTGGTTGACGCCGGCAATGGCCGATTCTTCACTCAGCGCGCGCTGCCGC
ACATGTCCCAACTGTCGGTGTTGTGGAACGCCAGCGGCGGTGTAACGCTTTCGGCACCCGGCTTCGAGCCTCTGGATGTC
GCGGTTCCGCCGGATATCGACTTGAACCTGCGGGGTGTGACCGTCTGGCGTGACTCGCTGCAGGTGCCGGACGCGGGCGA
TGAGGCAGCCGAATGGGTCAGCCGGTTTATCGGCAAGCCCACGCGTATGGTCTATCTGCCGGCAGAGCGTGCACGCTGGA
TCCCTGGTGGCTATCAGACGGTCAACGACCGGGTGAGCTTTGCCGATGGTTTTCCACTGTTGCTGATCGGTCAGGGATCG
CTCGATGACCTGTCAGCGCGCATGGGCAGGCCGATGGAAATGCTGCGCTTCAGACCCAATCTGGTGATCGAAGGGGCCGA
GGCCTTTGCCGAGGATAGCTGGAAACGCATCCGCATCGGCGACATCGAGTTCCAGCTGCTCACGCCTTGCGCACGCTGCA
TCCTCACCACCGTCGACCCGGCAACCGGCGAGCGCAGTGCAGATCGCGAACCGTTCGCTACGCTCAAGACTTATCGGGAA
GTGGAAGGCAACGTGCTGTTCGGTCAGAACGTGGTCAACGAGGGGTTGGGCGAGCTTGAAGTGGGGATGTCAGTCGAAGT
GCTGGAGTAG

Upstream 100 bases:

>100_bases
CCGCGCTCGATTCTACATCGCGAGTGCCGCCGGCTCCGGCATCGGATAAGCTTTGCTGTCTGCAGCAAAGCTTATCCAGC
CCTCAAAGGAATCGGCGCCC

Downstream 100 bases:

>100_bases
GGGCGGGGACTGCCGTTGTCTGGCAGGAGTGCTTAACGCAGCACTCCTGCCGACCGGTCACTGGTCGTCGAAAAACCGCT
CGTGCCAGTCCACCAGAGGC

Product: MOSC:MOSC, N-terminal beta barrel

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MLRLSSLYRFPLKSCKAESMQRASFDALGLAGDRRWMLVDAGNGRFFTQRALPHMSQLSVLWNASGGVTLSAPGFEPLDV
AVPPDIDLNLRGVTVWRDSLQVPDAGDEAAEWVSRFIGKPTRMVYLPAERARWIPGGYQTVNDRVSFADGFPLLLIGQGS
LDDLSARMGRPMEMLRFRPNLVIEGAEAFAEDSWKRIRIGDIEFQLLTPCARCILTTVDPATGERSADREPFATLKTYRE
VEGNVLFGQNVVNEGLGELEVGMSVEVLE

Sequences:

>Translated_269_residues
MLRLSSLYRFPLKSCKAESMQRASFDALGLAGDRRWMLVDAGNGRFFTQRALPHMSQLSVLWNASGGVTLSAPGFEPLDV
AVPPDIDLNLRGVTVWRDSLQVPDAGDEAAEWVSRFIGKPTRMVYLPAERARWIPGGYQTVNDRVSFADGFPLLLIGQGS
LDDLSARMGRPMEMLRFRPNLVIEGAEAFAEDSWKRIRIGDIEFQLLTPCARCILTTVDPATGERSADREPFATLKTYRE
VEGNVLFGQNVVNEGLGELEVGMSVEVLE
>Mature_269_residues
MLRLSSLYRFPLKSCKAESMQRASFDALGLAGDRRWMLVDAGNGRFFTQRALPHMSQLSVLWNASGGVTLSAPGFEPLDV
AVPPDIDLNLRGVTVWRDSLQVPDAGDEAAEWVSRFIGKPTRMVYLPAERARWIPGGYQTVNDRVSFADGFPLLLIGQGS
LDDLSARMGRPMEMLRFRPNLVIEGAEAFAEDSWKRIRIGDIEFQLLTPCARCILTTVDPATGERSADREPFATLKTYRE
VEGNVLFGQNVVNEGLGELEVGMSVEVLE

Specific function: Unknown

COG id: COG3217

COG function: function code R; Uncharacterized Fe-S protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 MOSC domain [H]

Homologues:

Organism=Homo sapiens, GI224600454, Length=284, Percent_Identity=32.3943661971831, Blast_Score=144, Evalue=1e-34,
Organism=Homo sapiens, GI31542713, Length=278, Percent_Identity=32.0143884892086, Blast_Score=132, Evalue=4e-31,
Organism=Homo sapiens, GI157388923, Length=276, Percent_Identity=28.2608695652174, Blast_Score=115, Evalue=6e-26,
Organism=Escherichia coli, GI1787179, Length=270, Percent_Identity=35.5555555555556, Blast_Score=151, Evalue=5e-38,
Organism=Caenorhabditis elegans, GI17540702, Length=290, Percent_Identity=32.4137931034483, Blast_Score=132, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI71990971, Length=299, Percent_Identity=30.7692307692308, Blast_Score=125, Evalue=3e-29,
Organism=Caenorhabditis elegans, GI17561286, Length=252, Percent_Identity=30.5555555555556, Blast_Score=120, Evalue=1e-27,
Organism=Caenorhabditis elegans, GI25147498, Length=266, Percent_Identity=25.5639097744361, Blast_Score=85, Evalue=3e-17,
Organism=Drosophila melanogaster, GI45550400, Length=264, Percent_Identity=30.3030303030303, Blast_Score=103, Evalue=1e-22,
Organism=Drosophila melanogaster, GI17647607, Length=256, Percent_Identity=26.953125, Blast_Score=79, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR001041
- InterPro:   IPR005302
- InterPro:   IPR005303
- InterPro:   IPR011037 [H]

Pfam domain/function: PF00111 Fer2; PF03473 MOSC; PF03476 MOSC_N [H]

EC number: NA

Molecular weight: Translated: 29824; Mature: 29824

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRLSSLYRFPLKSCKAESMQRASFDALGLAGDRRWMLVDAGNGRFFTQRALPHMSQLSV
CCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEEEEECCCCCEEEHHHCCCHHHEEE
LWNASGGVTLSAPGFEPLDVAVPPDIDLNLRGVTVWRDSLQVPDAGDEAAEWVSRFIGKP
EEECCCCEEEECCCCCCEEEECCCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHCCC
TRMVYLPAERARWIPGGYQTVNDRVSFADGFPLLLIGQGSLDDLSARMGRPMEMLRFRPN
EEEEEEEHHHCCCCCCCCEECCCEEEECCCCCEEEEECCCHHHHHHHHCCCHHHHHCCCC
LVIEGAEAFAEDSWKRIRIGDIEFQLLTPCARCILTTVDPATGERSADREPFATLKTYRE
EEEECHHHHHCCCCCEEEECCEEEEHHHHHHHHHEECCCCCCCCCCCCCCHHHHHHHHHH
VEGNVLFGQNVVNEGLGELEVGMSVEVLE
CCCCEEECCHHHHCCCCCEECCCEEEEEC
>Mature Secondary Structure
MLRLSSLYRFPLKSCKAESMQRASFDALGLAGDRRWMLVDAGNGRFFTQRALPHMSQLSV
CCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEEEEECCCCCEEEHHHCCCHHHEEE
LWNASGGVTLSAPGFEPLDVAVPPDIDLNLRGVTVWRDSLQVPDAGDEAAEWVSRFIGKP
EEECCCCEEEECCCCCCEEEECCCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHCCC
TRMVYLPAERARWIPGGYQTVNDRVSFADGFPLLLIGQGSLDDLSARMGRPMEMLRFRPN
EEEEEEEHHHCCCCCCCCEECCCEEEECCCCCEEEEECCCHHHHHHHHCCCHHHHHCCCC
LVIEGAEAFAEDSWKRIRIGDIEFQLLTPCARCILTTVDPATGERSADREPFATLKTYRE
EEEECHHHHHCCCCCEEEECCEEEEHHHHHHHHHEECCCCCCCCCCCCCCHHHHHHHHHH
VEGNVLFGQNVVNEGLGELEVGMSVEVLE
CCCCEEECCHHHHCCCCCEECCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]