| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is mtnP [H]
Identifier: 66046509
GI number: 66046509
Start: 3927626
End: 3928366
Strand: Reverse
Name: mtnP [H]
Synonym: Psyr_3280
Alternate gene names: 66046509
Gene position: 3928366-3927626 (Counterclockwise)
Preceding gene: 66046510
Following gene: 66046507
Centisome position: 64.47
GC content: 60.86
Gene sequence:
>741_bases ATGACTGTTTACGCGATTATTGGCGGTACTGGCCTGACCCAGCTCGAAGGCCTGAACATTCGGCAATCCCTGCCGATGAA CACGCCTTATGGCGCACCTTCCGGCGAAATCCAGATCGGCGACTATGCCGGTCGCGAAGTGATGTTTCTGGCGCGCCACG GCCACCCGCACCGCTTGCCGCCGCATCAGGTCAACTACCGGGCCAATATCTGGGCCCTGAAGCAGGCAGGTGCCGAAGCG ATTCTTGCGGTCAACGCAGTCGGCGGCATTCATCCGGCCATGGGCACCGGTCATTTCTGTGTGCCGCATGATCTGGTCGA CTACACCAGCGGTCGCCAGCACACATTTTTTGCCGATGACCTGGAAGAGGTCACGCACATCGACTTCAGTTATCCGTACA GCGAGCCACTGCGTGCCCGGCTGATTGCGGCGCTGGCTACTGAAGGATGCGCGTTCTCTGATCGGGGCGTTTATGCCTGT ACCCAGGGACCGCGTCTGGAGACCGTTGCCGAAATCATTCGCCTGGAGCGTGATGGTTGCGACATCGTCGGCATGACTGG CATGCCCGAAGCCGCGCTGGCGCGTGAGCTGGAGCTTGAATACGCCTGCCTGGCGCTGGTGGTCAATCCGGCAGCGGGCA AGTCGACCACCGTCATTACCATGGCGGAAATCGAACAGGCCTTGCGCGACGGAATGGGCAAGGTGAAAGCCACGCTTGCC CGGGTTCTGTCAGCGTCCTGA
Upstream 100 bases:
>100_bases CGGTCTGGCGTCGGCCAGTACCGACTATCGGCAACACCCGCGCTGGCAGGCCGCGCTCCAGGCTCTGCGCGCTGCTCAAC TGATCGATTAAGGATTTGCG
Downstream 100 bases:
>100_bases ATTACAGCATGCGCTTGAGGGTATTGTCCTTGCGCACCAGATGGTGCCAGAGCGCAGCGATCACATGCAGACCGATGACA TAGTAGAAGATCGAGCCCAG
Product: 5'-methylthioadenosine phosphorylase
Products: NA
Alternate protein names: 5'-methylthioadenosine phosphorylase; MTA phosphorylase [H]
Number of amino acids: Translated: 246; Mature: 245
Protein sequence:
>246_residues MTVYAIIGGTGLTQLEGLNIRQSLPMNTPYGAPSGEIQIGDYAGREVMFLARHGHPHRLPPHQVNYRANIWALKQAGAEA ILAVNAVGGIHPAMGTGHFCVPHDLVDYTSGRQHTFFADDLEEVTHIDFSYPYSEPLRARLIAALATEGCAFSDRGVYAC TQGPRLETVAEIIRLERDGCDIVGMTGMPEAALARELELEYACLALVVNPAAGKSTTVITMAEIEQALRDGMGKVKATLA RVLSAS
Sequences:
>Translated_246_residues MTVYAIIGGTGLTQLEGLNIRQSLPMNTPYGAPSGEIQIGDYAGREVMFLARHGHPHRLPPHQVNYRANIWALKQAGAEA ILAVNAVGGIHPAMGTGHFCVPHDLVDYTSGRQHTFFADDLEEVTHIDFSYPYSEPLRARLIAALATEGCAFSDRGVYAC TQGPRLETVAEIIRLERDGCDIVGMTGMPEAALARELELEYACLALVVNPAAGKSTTVITMAEIEQALRDGMGKVKATLA RVLSAS >Mature_245_residues TVYAIIGGTGLTQLEGLNIRQSLPMNTPYGAPSGEIQIGDYAGREVMFLARHGHPHRLPPHQVNYRANIWALKQAGAEAI LAVNAVGGIHPAMGTGHFCVPHDLVDYTSGRQHTFFADDLEEVTHIDFSYPYSEPLRARLIAALATEGCAFSDRGVYACT QGPRLETVAEIIRLERDGCDIVGMTGMPEAALARELELEYACLALVVNPAAGKSTTVITMAEIEQALRDGMGKVKATLAR VLSAS
Specific function: Catalyzes the formation of methylthio-D-ribose 1- phosphate (MTR-1-P) from methylthioadenosine (MTA) [H]
COG id: COG0005
COG function: function code F; Purine nucleoside phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PNP/MTAP phosphorylase family [H]
Homologues:
Organism=Homo sapiens, GI47132622, Length=238, Percent_Identity=30.2521008403361, Blast_Score=126, Evalue=2e-29, Organism=Escherichia coli, GI1788746, Length=200, Percent_Identity=27.5, Blast_Score=71, Evalue=8e-14, Organism=Caenorhabditis elegans, GI71980569, Length=239, Percent_Identity=35.5648535564854, Blast_Score=144, Evalue=5e-35, Organism=Saccharomyces cerevisiae, GI6323045, Length=215, Percent_Identity=33.4883720930233, Blast_Score=120, Evalue=2e-28, Organism=Drosophila melanogaster, GI221459247, Length=207, Percent_Identity=35.7487922705314, Blast_Score=128, Evalue=3e-30, Organism=Drosophila melanogaster, GI20130079, Length=207, Percent_Identity=34.7826086956522, Blast_Score=128, Evalue=4e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010044 - InterPro: IPR000845 - InterPro: IPR001369 - InterPro: IPR018099 [H]
Pfam domain/function: PF01048 PNP_UDP_1 [H]
EC number: =2.4.2.28 [H]
Molecular weight: Translated: 26461; Mature: 26329
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: PS01240 PNP_MTAP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVYAIIGGTGLTQLEGLNIRQSLPMNTPYGAPSGEIQIGDYAGREVMFLARHGHPHRLP CEEEEEECCCCCCEECCCCCHHCCCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCC PHQVNYRANIWALKQAGAEAILAVNAVGGIHPAMGTGHFCVPHDLVDYTSGRQHTFFADD CCCCCEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCEECCHHHHHCCCCCCEEEEHHH LEEVTHIDFSYPYSEPLRARLIAALATEGCAFSDRGVYACTQGPRLETVAEIIRLERDGC HHHHHEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCC DIVGMTGMPEAALARELELEYACLALVVNPAAGKSTTVITMAEIEQALRDGMGKVKATLA CEEECCCCCHHHHHHHHHHHEEEEEEEECCCCCCCEEEEEHHHHHHHHHHCHHHHHHHHH RVLSAS HHHHCC >Mature Secondary Structure TVYAIIGGTGLTQLEGLNIRQSLPMNTPYGAPSGEIQIGDYAGREVMFLARHGHPHRLP EEEEEECCCCCCEECCCCCHHCCCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCC PHQVNYRANIWALKQAGAEAILAVNAVGGIHPAMGTGHFCVPHDLVDYTSGRQHTFFADD CCCCCEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCEECCHHHHHCCCCCCEEEEHHH LEEVTHIDFSYPYSEPLRARLIAALATEGCAFSDRGVYACTQGPRLETVAEIIRLERDGC HHHHHEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCC DIVGMTGMPEAALARELELEYACLALVVNPAAGKSTTVITMAEIEQALRDGMGKVKATLA CEEECCCCCHHHHHHHHHHHEEEEEEEECCCCCCCEEEEEHHHHHHHHHHCHHHHHHHHH RVLSAS HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12928499 [H]