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The map label for this gene is iolH [H]

Identifier: 66046496

GI number: 66046496

Start: 3912557

End: 3913417

Strand: Reverse

Name: iolH [H]

Synonym: Psyr_3267

Alternate gene names: 66046496

Gene position: 3913417-3912557 (Counterclockwise)

Preceding gene: 66046497

Following gene: 66046495

Centisome position: 64.22

GC content: 55.63

Gene sequence:

>861_bases
ATGCGTATTGCATTGGACCCTTACATGTATCGCCATCTGTCTCTGGGGGCAATGGTCGATAAAACCGCCGAGCTGGGTTA
TGACTACATCGAGCTGTCGCCGCGTGAAGATTTCATGCCGTTTTACAAATACCCACGGGTGGATCGGGCGCGGATCAGGG
AGTTTCGCAAGGCCCTGAGCGATGCCGGGGTGAAACTCTCCTCGTTGCTGCCGCTGTACCACTGGGCTGCGCCAGATGAA
GACCTGCGTATTGCAGCGGTTCGCAACTGGAAACGTGCCATTCAGGTCGCCGTTGAAATGGACTGCGACCTGATGAATAC
CGAGTTCAGCGGGCAATCCGACCATGCGCTGGTCTGTGAAAACCAGTTTATGAAATCCATGGATGAACTGATGCCGCATT
TCGAGCGCGAAGGCATAAAGCTCGATATTCAGGCGCACCCCTACGATTTCTGCGAGCGCAACAACGAGTCGGTGGATATC
ATTCGCGGGCTCGATCGGGACTGGATCAACTACCTGTACGCGGCACCACACACTTTCTTCTACGACGATGGCGTTGGCGA
TATCGCTTCGATGCTGCGCTATGCCGGCGACAAGCTCACGCATCTGATCATTGCCGACACCTATAATCACCGTGCTTCTT
CCAACCTGCGCTACATCGTCAACCCGCCCGGCGTGACGGCGACGGTGCATCAGCACCTGGACATCGGCCAGGGCGAGGTG
AACTGGGAAGCATTTTTCTCGACGTTGCGGGATATCAATTTCGACGGTATTGCCACAGTGGCTGTCTTTGCCTGGGAGGA
GCGCGCAGATGAATCGAGCCGATTCATGCTGGAGCGGGTCAAAAGCGAGCTGTTTCGTTGA

Upstream 100 bases:

>100_bases
CGCAGTCGTGCCGATCACCCTCGCCATGCGTCCGGTGTTCTATAGCTGACCATCTTGCGGTTAACCAATACATCTCTTGA
AAGGAATAAAAGGAGGCATC

Downstream 100 bases:

>100_bases
TACGGCGGCATCAAATACACGACCGATGGCTGCGGCCATGAGGTTCATGGACTACAGGAGATATCCATGCGTGCAGGGCT
GGTGGGCTATGGCAAAGGCG

Product: AP endonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MRIALDPYMYRHLSLGAMVDKTAELGYDYIELSPREDFMPFYKYPRVDRARIREFRKALSDAGVKLSSLLPLYHWAAPDE
DLRIAAVRNWKRAIQVAVEMDCDLMNTEFSGQSDHALVCENQFMKSMDELMPHFEREGIKLDIQAHPYDFCERNNESVDI
IRGLDRDWINYLYAAPHTFFYDDGVGDIASMLRYAGDKLTHLIIADTYNHRASSNLRYIVNPPGVTATVHQHLDIGQGEV
NWEAFFSTLRDINFDGIATVAVFAWEERADESSRFMLERVKSELFR

Sequences:

>Translated_286_residues
MRIALDPYMYRHLSLGAMVDKTAELGYDYIELSPREDFMPFYKYPRVDRARIREFRKALSDAGVKLSSLLPLYHWAAPDE
DLRIAAVRNWKRAIQVAVEMDCDLMNTEFSGQSDHALVCENQFMKSMDELMPHFEREGIKLDIQAHPYDFCERNNESVDI
IRGLDRDWINYLYAAPHTFFYDDGVGDIASMLRYAGDKLTHLIIADTYNHRASSNLRYIVNPPGVTATVHQHLDIGQGEV
NWEAFFSTLRDINFDGIATVAVFAWEERADESSRFMLERVKSELFR
>Mature_286_residues
MRIALDPYMYRHLSLGAMVDKTAELGYDYIELSPREDFMPFYKYPRVDRARIREFRKALSDAGVKLSSLLPLYHWAAPDE
DLRIAAVRNWKRAIQVAVEMDCDLMNTEFSGQSDHALVCENQFMKSMDELMPHFEREGIKLDIQAHPYDFCERNNESVDI
IRGLDRDWINYLYAAPHTFFYDDGVGDIASMLRYAGDKLTHLIIADTYNHRASSNLRYIVNPPGVTATVHQHLDIGQGEV
NWEAFFSTLRDINFDGIATVAVFAWEERADESSRFMLERVKSELFR

Specific function: Unknown

COG id: COG1082

COG function: function code G; Sugar phosphate isomerases/epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013022
- InterPro:   IPR012307 [H]

Pfam domain/function: PF01261 AP_endonuc_2 [H]

EC number: NA

Molecular weight: Translated: 33210; Mature: 33210

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIALDPYMYRHLSLGAMVDKTAELGYDYIELSPREDFMPFYKYPRVDRARIREFRKALS
CEEECCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHCCCCCCHHHHHHHHHHHH
DAGVKLSSLLPLYHWAAPDEDLRIAAVRNWKRAIQVAVEMDCDLMNTEFSGQSDHALVCE
HCCCCHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCEEEEH
NQFMKSMDELMPHFEREGIKLDIQAHPYDFCERNNESVDIIRGLDRDWINYLYAAPHTFF
HHHHHHHHHHHHHHHHCCEEEEEEECCCHHHHCCCCCCHHHHCCCHHHHHHHHHCCCEEE
YDDGVGDIASMLRYAGDKLTHLIIADTYNHRASSNLRYIVNPPGVTATVHQHLDIGQGEV
EECCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCEEEECCCCCEEEHHHHCCCCCCCC
NWEAFFSTLRDINFDGIATVAVFAWEERADESSRFMLERVKSELFR
CHHHHHHHHHHCCCCCHHHHEEEEEHHHCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRIALDPYMYRHLSLGAMVDKTAELGYDYIELSPREDFMPFYKYPRVDRARIREFRKALS
CEEECCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHCCCCCCHHHHHHHHHHHH
DAGVKLSSLLPLYHWAAPDEDLRIAAVRNWKRAIQVAVEMDCDLMNTEFSGQSDHALVCE
HCCCCHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCEEEEH
NQFMKSMDELMPHFEREGIKLDIQAHPYDFCERNNESVDIIRGLDRDWINYLYAAPHTFF
HHHHHHHHHHHHHHHHCCEEEEEEECCCHHHHCCCCCCHHHHCCCHHHHHHHHHCCCEEE
YDDGVGDIASMLRYAGDKLTHLIIADTYNHRASSNLRYIVNPPGVTATVHQHLDIGQGEV
EECCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCEEEECCCCCEEEHHHHCCCCCCCC
NWEAFFSTLRDINFDGIATVAVFAWEERADESSRFMLERVKSELFR
CHHHHHHHHHHCCCCCHHHHEEEEEHHHCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7952181; 9384377; 1761221 [H]