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The map label for this gene is mcp4 [H]

Identifier: 66046490

GI number: 66046490

Start: 3904845

End: 3906449

Strand: Reverse

Name: mcp4 [H]

Synonym: Psyr_3261

Alternate gene names: 66046490

Gene position: 3906449-3904845 (Counterclockwise)

Preceding gene: 66046491

Following gene: 66046489

Centisome position: 64.11

GC content: 63.36

Gene sequence:

>1605_bases
ATGGCCGAGAACCTATCCATGGCAGCCGGATTGCCGCTGGCCGATACGCCCGACGCTGCATCCAGGTGGTGGGTGCCGGC
GGTGCAAAGCGTTGTCCTGTGCCTGCTGTTCGCCGCCATGAGTGTTGCGGGCCTGTCGCTGTATGTTGTCGTTCCTCTGG
CCTTGCTGGTGGTCTGGTTGCCGCGCCTGGTGCGCAGCAGGCCAGCGCTGCCGCAACGCGCGTTGGCCGACAGCGATATC
GCCTTGCTGACCCGCGACCTGTCGCGCACCACCAGTCATAACGCGCTGTCCGCGGCCCAGGTGGCTTTTTCGGTCGGGCA
CCTGGCCGGCAAGGTGCAGTCGCAACTGGGGGCTGCCGAACAGATCGTCAGCAGTGCCGAGCAGATGATCGCCACCGAAC
AACAGACGGCCCAGTTGAGTCAACAGGCGTTGGTTGCCGCCAGCGAGGCGCGGCAGCGCAGCGAATCGGGCAGCGGCGTG
CTGAATGAGTCCATCGAACGCATGCACCGCCTGAGCAAGCGTGCCGTCGGCAGCCGCGAGTTGATCGAGGCGCTGAGCCA
GCGCAGCGAAGAGATCCAGCGTGTGACGCTGGTCATTCAGTCGATTGCCAGCCAGACCAACCTGCTGGCGCTCAATGCCG
CCATCGAAGCGGCGCGGGCTGGCGAGCACGGACGCGGTTTCGCCGTGGTTGCCGACGAAGTCCGTGGTCTCGCTGGCCGC
ACTGCCAGCGCCACAGGCGAGGTAGGGCAGATGGTCGCGGATATTCAGCAGCGCACCGCCCAGGTCGTGGAGCAGATTCG
CGAGCTGTCGTCCGATCTGGATATGGGGGTCGAGCAGATCGAGCTGACCGGCGAGCACCTGGGCAATATCGCCCGGCTTG
CGGTCGAGCTGGAAAGCCAGGTTGGCGAAATCGCGCAGGGCGCGCGGAGTAATCAGGATCAGTTGGCGAGCCTGTTCGAC
GCTGTCGAGCATATGCGCAGTGATCTTGCCGTCAGCGATGAGCAGACCCGGCAACTGGCCAAGTCCGCAGTGCAGATGGA
GGGGCAGGCCGAGACCATCAGCCAGCGTCTGGCGCAGGTTGGTCTGGATGAATACCACCAGCGCATTTATGACCTGGCCC
GTGAAGGCGCGCGAATGATCAGCGAAAAGTTCGAGGCCGATATCGAACAGGGGCGGGTCAGCCTTGATGACCTGTTTGAT
CGTAACTACAAACCCGTCACCAATACGTCGCCCACTCGGTTTACGACGCGTTTCGACCGTTACACCGATCAGGTATTGCC
AGCACTGCAGGAACCGCTACTGTCTCGCCATGAAGGTCTGGTATTTGCCATCGCCTGTACCCAGCAGGGCTATGTGCCGA
CGCACAACAATGCCTTCAGCCAGCCCTTGACGGGCGACGCGACGGTGGATAACGCGCGCAATCGAAGCAAGCGCAAGTTC
GATGATCGCACCGGCATTCGCTGTGGCAGCCACCAACAGCCGGTCCTGCTGCAAACCTACACGCGAGACACCGGCGAACT
GATGCACGACCTGTCCGTGCCGATCATGGTCAACGGGCGGCACTGGGGTGGTCTGCGCCTGGGGTACAGGCCGCAAGGCT
GCTGA

Upstream 100 bases:

>100_bases
TCGCCACCGCTCGGTCGCTACGACCAACAGCGCATGGCACAAGGCCGTTATCTGGCGTTTAATAGCGTCATAACGACAAT
GACAGACGGGGTGACGCAAC

Downstream 100 bases:

>100_bases
TGTGTAAGCGATCATTCAGGTCGGTAAGCCCGGCAAGGGAGCTGGCCTTTTAGTTAGTCTTTTTAATGCAAGAACGCATC
AGGAAAGTTATCGCTGCGTG

Product: chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 534; Mature: 533

Protein sequence:

>534_residues
MAENLSMAAGLPLADTPDAASRWWVPAVQSVVLCLLFAAMSVAGLSLYVVVPLALLVVWLPRLVRSRPALPQRALADSDI
ALLTRDLSRTTSHNALSAAQVAFSVGHLAGKVQSQLGAAEQIVSSAEQMIATEQQTAQLSQQALVAASEARQRSESGSGV
LNESIERMHRLSKRAVGSRELIEALSQRSEEIQRVTLVIQSIASQTNLLALNAAIEAARAGEHGRGFAVVADEVRGLAGR
TASATGEVGQMVADIQQRTAQVVEQIRELSSDLDMGVEQIELTGEHLGNIARLAVELESQVGEIAQGARSNQDQLASLFD
AVEHMRSDLAVSDEQTRQLAKSAVQMEGQAETISQRLAQVGLDEYHQRIYDLAREGARMISEKFEADIEQGRVSLDDLFD
RNYKPVTNTSPTRFTTRFDRYTDQVLPALQEPLLSRHEGLVFAIACTQQGYVPTHNNAFSQPLTGDATVDNARNRSKRKF
DDRTGIRCGSHQQPVLLQTYTRDTGELMHDLSVPIMVNGRHWGGLRLGYRPQGC

Sequences:

>Translated_534_residues
MAENLSMAAGLPLADTPDAASRWWVPAVQSVVLCLLFAAMSVAGLSLYVVVPLALLVVWLPRLVRSRPALPQRALADSDI
ALLTRDLSRTTSHNALSAAQVAFSVGHLAGKVQSQLGAAEQIVSSAEQMIATEQQTAQLSQQALVAASEARQRSESGSGV
LNESIERMHRLSKRAVGSRELIEALSQRSEEIQRVTLVIQSIASQTNLLALNAAIEAARAGEHGRGFAVVADEVRGLAGR
TASATGEVGQMVADIQQRTAQVVEQIRELSSDLDMGVEQIELTGEHLGNIARLAVELESQVGEIAQGARSNQDQLASLFD
AVEHMRSDLAVSDEQTRQLAKSAVQMEGQAETISQRLAQVGLDEYHQRIYDLAREGARMISEKFEADIEQGRVSLDDLFD
RNYKPVTNTSPTRFTTRFDRYTDQVLPALQEPLLSRHEGLVFAIACTQQGYVPTHNNAFSQPLTGDATVDNARNRSKRKF
DDRTGIRCGSHQQPVLLQTYTRDTGELMHDLSVPIMVNGRHWGGLRLGYRPQGC
>Mature_533_residues
AENLSMAAGLPLADTPDAASRWWVPAVQSVVLCLLFAAMSVAGLSLYVVVPLALLVVWLPRLVRSRPALPQRALADSDIA
LLTRDLSRTTSHNALSAAQVAFSVGHLAGKVQSQLGAAEQIVSSAEQMIATEQQTAQLSQQALVAASEARQRSESGSGVL
NESIERMHRLSKRAVGSRELIEALSQRSEEIQRVTLVIQSIASQTNLLALNAAIEAARAGEHGRGFAVVADEVRGLAGRT
ASATGEVGQMVADIQQRTAQVVEQIRELSSDLDMGVEQIELTGEHLGNIARLAVELESQVGEIAQGARSNQDQLASLFDA
VEHMRSDLAVSDEQTRQLAKSAVQMEGQAETISQRLAQVGLDEYHQRIYDLAREGARMISEKFEADIEQGRVSLDDLFDR
NYKPVTNTSPTRFTTRFDRYTDQVLPALQEPLLSRHEGLVFAIACTQQGYVPTHNNAFSQPLTGDATVDNARNRSKRKFD
DRTGIRCGSHQQPVLLQTYTRDTGELMHDLSVPIMVNGRHWGGLRLGYRPQGC

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=233, Percent_Identity=33.4763948497854, Blast_Score=106, Evalue=4e-24,
Organism=Escherichia coli, GI2367378, Length=297, Percent_Identity=29.6296296296296, Blast_Score=101, Evalue=1e-22,
Organism=Escherichia coli, GI1787690, Length=248, Percent_Identity=31.0483870967742, Blast_Score=97, Evalue=3e-21,
Organism=Escherichia coli, GI1788194, Length=262, Percent_Identity=32.4427480916031, Blast_Score=88, Evalue=2e-18,
Organism=Escherichia coli, GI1789453, Length=207, Percent_Identity=31.4009661835749, Blast_Score=85, Evalue=9e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013163
- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF08269 Cache_2; PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 58229; Mature: 58098

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAENLSMAAGLPLADTPDAASRWWVPAVQSVVLCLLFAAMSVAGLSLYVVVPLALLVVWL
CCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PRLVRSRPALPQRALADSDIALLTRDLSRTTSHNALSAAQVAFSVGHLAGKVQSQLGAAE
HHHHHCCCCCCHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
QIVSSAEQMIATEQQTAQLSQQALVAASEARQRSESGSGVLNESIERMHRLSKRAVGSRE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHH
LIEALSQRSEEIQRVTLVIQSIASQTNLLALNAAIEAARAGEHGRGFAVVADEVRGLAGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHCCC
TASATGEVGQMVADIQQRTAQVVEQIRELSSDLDMGVEQIELTGEHLGNIARLAVELESQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
VGEIAQGARSNQDQLASLFDAVEHMRSDLAVSDEQTRQLAKSAVQMEGQAETISQRLAQV
HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH
GLDEYHQRIYDLAREGARMISEKFEADIEQGRVSLDDLFDRNYKPVTNTSPTRFTTRFDR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCHHHHHHHH
YTDQVLPALQEPLLSRHEGLVFAIACTQQGYVPTHNNAFSQPLTGDATVDNARNRSKRKF
HHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHC
DDRTGIRCGSHQQPVLLQTYTRDTGELMHDLSVPIMVNGRHWGGLRLGYRPQGC
CHHCCCCCCCCCCCEEEEHHCCHHHHHHHHCCCCEEECCCCCCCEEECCCCCCC
>Mature Secondary Structure 
AENLSMAAGLPLADTPDAASRWWVPAVQSVVLCLLFAAMSVAGLSLYVVVPLALLVVWL
CCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PRLVRSRPALPQRALADSDIALLTRDLSRTTSHNALSAAQVAFSVGHLAGKVQSQLGAAE
HHHHHCCCCCCHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
QIVSSAEQMIATEQQTAQLSQQALVAASEARQRSESGSGVLNESIERMHRLSKRAVGSRE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHH
LIEALSQRSEEIQRVTLVIQSIASQTNLLALNAAIEAARAGEHGRGFAVVADEVRGLAGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHCCC
TASATGEVGQMVADIQQRTAQVVEQIRELSSDLDMGVEQIELTGEHLGNIARLAVELESQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
VGEIAQGARSNQDQLASLFDAVEHMRSDLAVSDEQTRQLAKSAVQMEGQAETISQRLAQV
HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH
GLDEYHQRIYDLAREGARMISEKFEADIEQGRVSLDDLFDRNYKPVTNTSPTRFTTRFDR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCHHHHHHHH
YTDQVLPALQEPLLSRHEGLVFAIACTQQGYVPTHNNAFSQPLTGDATVDNARNRSKRKF
HHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHC
DDRTGIRCGSHQQPVLLQTYTRDTGELMHDLSVPIMVNGRHWGGLRLGYRPQGC
CHHCCCCCCCCCCCEEEEHHCCHHHHHHHHCCCCEEECCCCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]