| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66046478
Identifier: 66046478
GI number: 66046478
Start: 3892551
End: 3893954
Strand: Reverse
Name: 66046478
Synonym: Psyr_3249
Alternate gene names: NA
Gene position: 3893954-3892551 (Counterclockwise)
Preceding gene: 66046479
Following gene: 66046475
Centisome position: 63.9
GC content: 65.6
Gene sequence:
>1404_bases ATGATCGAAGATTCCCACCAGACGGCTGACATTCTGATCATCGGCGGCGGTCTGAGCGGGACCATGCTGGCGGCGCAACT GCTGCGCAGACCGGGCCGGCGCCGAATCCTGATCATCGAAACCCGCAGCGAACTCGGCAGGGGCGAGGCCTACAGTGCGA CGGAGCCGGGCCATACACTCAATGGCAACGCTGCACGGATGAGCGTCGATCCGGACAACCCGGATGACCTCACCCAGTGG CTGACTGACTATCTGGCTGCCGGTGGCTGGCCTGAAGCCGCCGAGCAGAGGGTCCCGGTCGCCGAGCTGTTCCCGCCGCG CGGCGTGTTCGGGCTTTATGTCCAGCAGCGACTGCGTGAAGCCCGAAGCGCTGGTGAAGCCTTTGGCTCGACCGCCGTGC ATGTGCCCGGCGAGGCAGTGGACCTGCAGGTCGATGCGGATGGCGTGAGTGTCTCGCTGGCTGACGGTCGTAAGGTGCAT GGCAGCCGGGCTGTGCTGGCGACCGGCATGTACGCGGCTTCACGCACCCCGCGACGTGATTCGAACGAGCTGAACACGGC AGCACTGGACCCCTGGGATGTGGCGGTGATGAGAAAGCTCGATCCGCAGTCGAGGGTGCTGATCATCGGCTCGGGGCTGA CCATGGTCGATGCGCTGGTTTCGCTGGAAACGGCCGGGCATCGTGGGCCCATCCAGATCTTTTCCCGGCACGGCCTGCTG CCGCATGTCCGGCGTCAGCCGCCGGAATGGTCTGATTTTCTTGCTCAGGACCCGAGTATCCGCAGTACTCGGCAACTGGT GCGCAAAGTGCGTGAACAGTGCGAGCTGGCCATCGAGAGCGGCATTGACTGGCAGGCCCCGCTGGACACTGTGCGCGCCA ACGTCGGCAGGCTGTGGAATCAGGCCAGCGATCAACAGCGCCGCCAGTTCGTCCGTCATGTAAGGCCTTGGTGGGAGAGC CACCACCATCGCTCCCCGCCACCGAGCGCTGCGCTGCTGGCGCGGCTGATCAGGCAAGGGCGGTTGAGTATTGACGCGGC CTCGCTGCAGGGCGTGGCCAGTCTGCCGTCAGGTCAGGTACAGATCAGCGTGCGTCGGCGCGGTGAGAGTCAGCCGACGC AGATCAGCGGCGATGCGCTGATCAACTCCACCGGCATCGAGTACGACTGGCGACGCGTGGATCGCCCGTTGCCCCGGCAG TTGCTGGCACGCGGGCTGATCCAGCCCGGCCCGCTGGCACTCGGCATCGCTGCCGACGCTGCGGGCGCAGTACTTGACGC ACACGGTCAGTACTCGGCACGCCTGTTCGCCATGGGCCCGCCATTGCGCGGCATGTGGTGGGAAAGCACCGCAGTAACCG ACGTGGCGATCCAGGCCAAGGCGCTGGCGATACATTTGTCGTAA
Upstream 100 bases:
>100_bases CCGCTACTGCAACGACGCCGATGTGCCCCTGCGCTTCGTGCGTAACGTCGTGCTCTGACCTTCCCATTCTTTTACAGCCA CCCCAGCGAGGCACTGTTCG
Downstream 100 bases:
>100_bases GGCACCGCCTGCTCAGAAGAGGACGCAGAGCGTCCGGAAAGGCATACCCACGCGGAGCATGGGTACGATAGTGTTCTCGC GAGCACCTATCGTTCCTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: Hydroxyacylglutathione Hydrolase; Pyridine Nucleotide-Disulfide Oxidoreductase Family Protein; FAD-Dependent Pyridine Nucleotide-Disulphide Oxidoreductase; Beta-Lactamase Domain-Containing Protein; FAD-Dependent Oxidoreductase; Pyridine Nucleotide-Disulfide Family Oxidoreductase; Oxidoreductase; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; FAD-Dependent Oxidoreductase Protein; Pyridine Nucleotide-Disulfide Oxidoreductase Family
Number of amino acids: Translated: 467; Mature: 467
Protein sequence:
>467_residues MIEDSHQTADILIIGGGLSGTMLAAQLLRRPGRRRILIIETRSELGRGEAYSATEPGHTLNGNAARMSVDPDNPDDLTQW LTDYLAAGGWPEAAEQRVPVAELFPPRGVFGLYVQQRLREARSAGEAFGSTAVHVPGEAVDLQVDADGVSVSLADGRKVH GSRAVLATGMYAASRTPRRDSNELNTAALDPWDVAVMRKLDPQSRVLIIGSGLTMVDALVSLETAGHRGPIQIFSRHGLL PHVRRQPPEWSDFLAQDPSIRSTRQLVRKVREQCELAIESGIDWQAPLDTVRANVGRLWNQASDQQRRQFVRHVRPWWES HHHRSPPPSAALLARLIRQGRLSIDAASLQGVASLPSGQVQISVRRRGESQPTQISGDALINSTGIEYDWRRVDRPLPRQ LLARGLIQPGPLALGIAADAAGAVLDAHGQYSARLFAMGPPLRGMWWESTAVTDVAIQAKALAIHLS
Sequences:
>Translated_467_residues MIEDSHQTADILIIGGGLSGTMLAAQLLRRPGRRRILIIETRSELGRGEAYSATEPGHTLNGNAARMSVDPDNPDDLTQW LTDYLAAGGWPEAAEQRVPVAELFPPRGVFGLYVQQRLREARSAGEAFGSTAVHVPGEAVDLQVDADGVSVSLADGRKVH GSRAVLATGMYAASRTPRRDSNELNTAALDPWDVAVMRKLDPQSRVLIIGSGLTMVDALVSLETAGHRGPIQIFSRHGLL PHVRRQPPEWSDFLAQDPSIRSTRQLVRKVREQCELAIESGIDWQAPLDTVRANVGRLWNQASDQQRRQFVRHVRPWWES HHHRSPPPSAALLARLIRQGRLSIDAASLQGVASLPSGQVQISVRRRGESQPTQISGDALINSTGIEYDWRRVDRPLPRQ LLARGLIQPGPLALGIAADAAGAVLDAHGQYSARLFAMGPPLRGMWWESTAVTDVAIQAKALAIHLS >Mature_467_residues MIEDSHQTADILIIGGGLSGTMLAAQLLRRPGRRRILIIETRSELGRGEAYSATEPGHTLNGNAARMSVDPDNPDDLTQW LTDYLAAGGWPEAAEQRVPVAELFPPRGVFGLYVQQRLREARSAGEAFGSTAVHVPGEAVDLQVDADGVSVSLADGRKVH GSRAVLATGMYAASRTPRRDSNELNTAALDPWDVAVMRKLDPQSRVLIIGSGLTMVDALVSLETAGHRGPIQIFSRHGLL PHVRRQPPEWSDFLAQDPSIRSTRQLVRKVREQCELAIESGIDWQAPLDTVRANVGRLWNQASDQQRRQFVRHVRPWWES HHHRSPPPSAALLARLIRQGRLSIDAASLQGVASLPSGQVQISVRRRGESQPTQISGDALINSTGIEYDWRRVDRPLPRQ LLARGLIQPGPLALGIAADAAGAVLDAHGQYSARLFAMGPPLRGMWWESTAVTDVAIQAKALAIHLS
Specific function: Unknown
COG id: COG4529
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50962; Mature: 50962
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEDSHQTADILIIGGGLSGTMLAAQLLRRPGRRRILIIETRSELGRGEAYSATEPGHTL CCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEEEHHHCCCCCCCCCCCCCCCC NGNAARMSVDPDNPDDLTQWLTDYLAAGGWPEAAEQRVPVAELFPPRGVFGLYVQQRLRE CCCEEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHCCCCCHHHHHHHHHHHH ARSAGEAFGSTAVHVPGEAVDLQVDADGVSVSLADGRKVHGSRAVLATGMYAASRTPRRD HHHHHHHHCCCEEECCCCEEEEEEECCCCEEEECCCCEECCCCEEEEHHHHHHCCCCCCC SNELNTAALDPWDVAVMRKLDPQSRVLIIGSGLTMVDALVSLETAGHRGPIQIFSRHGLL CCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCHHHHHCCCCC PHVRRQPPEWSDFLAQDPSIRSTRQLVRKVREQCELAIESGIDWQAPLDTVRANVGRLWN CHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH QASDQQRRQFVRHVRPWWESHHHRSPPPSAALLARLIRQGRLSIDAASLQGVASLPSGQV CCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEHHHHCHHHCCCCCCE QISVRRRGESQPTQISGDALINSTGIEYDWRRVDRPLPRQLLARGLIQPGPLALGIAADA EEEEEECCCCCCCEECCCEEEECCCCCCHHHHCCCCCHHHHHHHCCCCCCCEEEEEECCC AGAVLDAHGQYSARLFAMGPPLRGMWWESTAVTDVAIQAKALAIHLS CCCEEECCCCCEEEEEEECCCCCCCEECCCCHHHHEEEEEEEEEEEC >Mature Secondary Structure MIEDSHQTADILIIGGGLSGTMLAAQLLRRPGRRRILIIETRSELGRGEAYSATEPGHTL CCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEEEHHHCCCCCCCCCCCCCCCC NGNAARMSVDPDNPDDLTQWLTDYLAAGGWPEAAEQRVPVAELFPPRGVFGLYVQQRLRE CCCEEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHCCCCCHHHHHHHHHHHH ARSAGEAFGSTAVHVPGEAVDLQVDADGVSVSLADGRKVHGSRAVLATGMYAASRTPRRD HHHHHHHHCCCEEECCCCEEEEEEECCCCEEEECCCCEECCCCEEEEHHHHHHCCCCCCC SNELNTAALDPWDVAVMRKLDPQSRVLIIGSGLTMVDALVSLETAGHRGPIQIFSRHGLL CCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCHHHHHCCCCC PHVRRQPPEWSDFLAQDPSIRSTRQLVRKVREQCELAIESGIDWQAPLDTVRANVGRLWN CHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH QASDQQRRQFVRHVRPWWESHHHRSPPPSAALLARLIRQGRLSIDAASLQGVASLPSGQV CCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEHHHHCHHHCCCCCCE QISVRRRGESQPTQISGDALINSTGIEYDWRRVDRPLPRQLLARGLIQPGPLALGIAADA EEEEEECCCCCCCEECCCEEEECCCCCCHHHHCCCCCHHHHHHHCCCCCCCEEEEEECCC AGAVLDAHGQYSARLFAMGPPLRGMWWESTAVTDVAIQAKALAIHLS CCCEEECCCCCEEEEEEECCCCCCCEECCCCHHHHEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA