| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66046459
Identifier: 66046459
GI number: 66046459
Start: 3868831
End: 3870060
Strand: Direct
Name: 66046459
Synonym: Psyr_3230
Alternate gene names: NA
Gene position: 3868831-3870060 (Clockwise)
Preceding gene: 66046458
Following gene: 66046460
Centisome position: 63.49
GC content: 64.07
Gene sequence:
>1230_bases ATGAGAATCGCTATCGTCCACGACTGGCTGGTGAGTTACGCCGGCGCCGAGCGCGTGCTCGCGTCACTGATCAACGTCTG GCCCGCTGCGGACCTGTTTGCGGTCATCGACTTCCTCAGCGATCAGGACCGCGCGCACCTGCATGGCAAGGTCGCCAGAA CGACGTTCATCCAGAAGCTGCCCGGCGCGCGCAAACACTATTCGCGCTACCTGCCGCTGATGCCGCTGGCCATCGAGCAA CTGGATCTGTCCGGCTATGACCTGATCATCAGCAGCAGCCATGCGGTGGCCAAGGGCGTGCTGTGCGGCCCGGACCAACT GCACATCAGCTATGTGCACTCGCCGATCCGCTATGCCTGGGACTTGCAGCACCAGTACCTCCAGGAATCAGGGCTGAACA AGGGAGCCAAGGGCGGTCTGGCACGCCTGATCCTGCATTACATGCGCCTGTGGGATCAGCGCACATCGACCGGCGTGGAC GCCTTCATTGCCAACTCCGGGTTTATCGGCGCGCGCATCACCAAGGCCTATCGTCGCGACTCCACCGTCATCTACCCGCC GGTAGACACGCTCGGCTTCACCGCCCAGGGCGCGCGCGGGGACTTCTATCTCTGTGCCTCGCGAATGGTGCCTTACAAAC GCATGCCGATGATCGTCGAAGCCTTTGCCGCCATGCCTGACAAACGCCTGATCATGATCGGCGACGGGCCGGACCTGGCC AAGGCGCAGGCCATTGCCAGCCAGGTGAGCAACGTGACGCTGCTGGGTTTTCAGCCAGGCAGCGTGCTGCTCGAGCATAT GCGCAGCGCCAGGGCGTTTGTCTTCGCCGCCGAGGAGGATTTCGGCATCAGCCCGGTCGAGGCCCAGGCTTGCGGTACGC CGGTCATCGCCTTCGCCAAGGGCGGCGTCATGGAGACCGTGCGCGGCCTGGATCACCCGCAGCCGACCGGCGTGTTCTAC CGAGAGCAAACGGTAGCGTCACTGATCGCCGCCATCGGCGAATTCGAAGCGGCGCAATCACGCATCTCTCCCGAGGCCTG CCGGGCCAATGCCGAGCGGTTTTCGGTCGCGCGTTTCGAGCAGGAAATCAAAGCCTTCGTCGAAGACCGTCTGGCCCTCT CACACGGGGTTCATCTGGCGCGCCCGCCTCAGTCGCAACGGGTCGCCCAGGCATCACCCGGCCTCGGCAGCGAGCTGCCG AACCGTGTCGTCCCCCTGAAAATCGTCTGA
Upstream 100 bases:
>100_bases GCCGACTCGCCCAGCGGCAAACCCTGAACCCACAACAGCAACGCCAGGATGCGCGCCGTCGCGTCCGCAGTAGCGCGGGC CATTACAGCAAGGAACGCCC
Downstream 100 bases:
>100_bases GCGAGCCCTTCCCATGCGTACTTCAGTCCGCGGCATTCTGCGTGCCCACCAGTCAGCGCTTTCGCTCGCCCACCGCTTGC TGGACCTGGCTGTCATCGTG
Product: glycosyl transferase, group 1
Products: NA
Alternate protein names: Group 1 Glycosyl Transferase; Glycosyl Transferase Group 1 Family Protein; Glycosyl Transferase; Mannosyltransferase; Glycosyl Transferase Group 1 Protein; First Mannosyl Transferase; Mannosyl Transferase; Glycosyltransferase Protein; Glycosyl Transferase Group 1 Family; Glycosyltransferase Group 1 Family Protein; Lipopolysaccharide Biosynthesys-Related Glycosyltransferase; First Mannosyl Transferase WbaZ; Group 1 Family Glycosyltransferase; Glycosyltransferase Family 4 Domain Protein; First Mannosyl Transferase O- Antigen Biosynthesis; Aldehyde Dehydrogenase; Glycosyl Transferase Family Protein; Mannose-1-Phosphate Guanylyltransferase
Number of amino acids: Translated: 409; Mature: 409
Protein sequence:
>409_residues MRIAIVHDWLVSYAGAERVLASLINVWPAADLFAVIDFLSDQDRAHLHGKVARTTFIQKLPGARKHYSRYLPLMPLAIEQ LDLSGYDLIISSSHAVAKGVLCGPDQLHISYVHSPIRYAWDLQHQYLQESGLNKGAKGGLARLILHYMRLWDQRTSTGVD AFIANSGFIGARITKAYRRDSTVIYPPVDTLGFTAQGARGDFYLCASRMVPYKRMPMIVEAFAAMPDKRLIMIGDGPDLA KAQAIASQVSNVTLLGFQPGSVLLEHMRSARAFVFAAEEDFGISPVEAQACGTPVIAFAKGGVMETVRGLDHPQPTGVFY REQTVASLIAAIGEFEAAQSRISPEACRANAERFSVARFEQEIKAFVEDRLALSHGVHLARPPQSQRVAQASPGLGSELP NRVVPLKIV
Sequences:
>Translated_409_residues MRIAIVHDWLVSYAGAERVLASLINVWPAADLFAVIDFLSDQDRAHLHGKVARTTFIQKLPGARKHYSRYLPLMPLAIEQ LDLSGYDLIISSSHAVAKGVLCGPDQLHISYVHSPIRYAWDLQHQYLQESGLNKGAKGGLARLILHYMRLWDQRTSTGVD AFIANSGFIGARITKAYRRDSTVIYPPVDTLGFTAQGARGDFYLCASRMVPYKRMPMIVEAFAAMPDKRLIMIGDGPDLA KAQAIASQVSNVTLLGFQPGSVLLEHMRSARAFVFAAEEDFGISPVEAQACGTPVIAFAKGGVMETVRGLDHPQPTGVFY REQTVASLIAAIGEFEAAQSRISPEACRANAERFSVARFEQEIKAFVEDRLALSHGVHLARPPQSQRVAQASPGLGSELP NRVVPLKIV >Mature_409_residues MRIAIVHDWLVSYAGAERVLASLINVWPAADLFAVIDFLSDQDRAHLHGKVARTTFIQKLPGARKHYSRYLPLMPLAIEQ LDLSGYDLIISSSHAVAKGVLCGPDQLHISYVHSPIRYAWDLQHQYLQESGLNKGAKGGLARLILHYMRLWDQRTSTGVD AFIANSGFIGARITKAYRRDSTVIYPPVDTLGFTAQGARGDFYLCASRMVPYKRMPMIVEAFAAMPDKRLIMIGDGPDLA KAQAIASQVSNVTLLGFQPGSVLLEHMRSARAFVFAAEEDFGISPVEAQACGTPVIAFAKGGVMETVRGLDHPQPTGVFY REQTVASLIAAIGEFEAAQSRISPEACRANAERFSVARFEQEIKAFVEDRLALSHGVHLARPPQSQRVAQASPGLGSELP NRVVPLKIV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44819; Mature: 44819
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIAIVHDWLVSYAGAERVLASLINVWPAADLFAVIDFLSDQDRAHLHGKVARTTFIQKL CEEEEEEHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHC PGARKHYSRYLPLMPLAIEQLDLSGYDLIISSSHAVAKGVLCGPDQLHISYVHSPIRYAW CCHHHHHHHCCCCHHHHHHHHCCCCCEEEEECCCHHHHCCEECCCCEEEHHHHHHHHHHH DLQHQYLQESGLNKGAKGGLARLILHYMRLWDQRTSTGVDAFIANSGFIGARITKAYRRD HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCC STVIYPPVDTLGFTAQGARGDFYLCASRMVPYKRMPMIVEAFAAMPDKRLIMIGDGPDLA CEEEECCCHHCCCCCCCCCCCEEEEHHHCCCHHHCHHHHHHHHHCCCCEEEEEECCCCHH KAQAIASQVSNVTLLGFQPGSVLLEHMRSARAFVFAAEEDFGISPVEAQACGTPVIAFAK HHHHHHHHHCCEEEEEECCHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHCCCCEEEECC GGVMETVRGLDHPQPTGVFYREQTVASLIAAIGEFEAAQSRISPEACRANAERFSVARFE CCHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHH QEIKAFVEDRLALSHGVHLARPPQSQRVAQASPGLGSELPNRVVPLKIV HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCEEEEEC >Mature Secondary Structure MRIAIVHDWLVSYAGAERVLASLINVWPAADLFAVIDFLSDQDRAHLHGKVARTTFIQKL CEEEEEEHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHC PGARKHYSRYLPLMPLAIEQLDLSGYDLIISSSHAVAKGVLCGPDQLHISYVHSPIRYAW CCHHHHHHHCCCCHHHHHHHHCCCCCEEEEECCCHHHHCCEECCCCEEEHHHHHHHHHHH DLQHQYLQESGLNKGAKGGLARLILHYMRLWDQRTSTGVDAFIANSGFIGARITKAYRRD HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCC STVIYPPVDTLGFTAQGARGDFYLCASRMVPYKRMPMIVEAFAAMPDKRLIMIGDGPDLA CEEEECCCHHCCCCCCCCCCCEEEEHHHCCCHHHCHHHHHHHHHCCCCEEEEEECCCCHH KAQAIASQVSNVTLLGFQPGSVLLEHMRSARAFVFAAEEDFGISPVEAQACGTPVIAFAK HHHHHHHHHCCEEEEEECCHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHCCCCEEEECC GGVMETVRGLDHPQPTGVFYREQTVASLIAAIGEFEAAQSRISPEACRANAERFSVARFE CCHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHH QEIKAFVEDRLALSHGVHLARPPQSQRVAQASPGLGSELPNRVVPLKIV HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA