Click here to switch to the map view.

The map label for this gene is rhtA [H]

Identifier: 66046446

GI number: 66046446

Start: 3853334

End: 3854221

Strand: Direct

Name: rhtA [H]

Synonym: Psyr_3217

Alternate gene names: 66046446

Gene position: 3853334-3854221 (Clockwise)

Preceding gene: 66046445

Following gene: 66046447

Centisome position: 63.23

GC content: 58.78

Gene sequence:

>888_bases
ATGTCTGAGAAATCCCGCAACATAGCCTCTGCCCTGTTCCCTCTGGGACTGCTGATGATCGCCATGGTCTCCATTCAAAG
CGGCGCGTCGCTGGCAAAGAGTCTTTTCCCTGTCGTGGGCGCGCAAGGCACCACAACACTCAGGCTGGTATTCGCCAGCC
TTATCCTGGTTGCCGTCCTGCGCCCGTGGCGGGCGAATCTGACTGCAAAGTCGTTACGCACTGTGGTGATCTACGGCGTT
GCGCTGGGCTGCATGAACCTTCTCTTCTATATGTCGTTGCAGACAGTACCCCTGGGAATTGCAGTAGCCCTTGAGTTCAC
CGGTCCGCTGGCGGTGGCTTTGCTGTCCTCCCGCAAGCCCATCGATTTTCTCTGGGTGACTCTGGCAGTCATTGGCTTGC
TGCTGTTGATCCCTCTGGGGACCTCATCTGCCGCAATTGATCTGCTCGGTGCCGGCTACGCCTTGGGCGCCGGTGTGTGC
TGGGCCGCGTACATCGTGTTCGGTCACAAGGCCGGCGCCGACAACGGTGTGCAGACAGCAGCGCTCGGCGTCGTGATTGC
CGCGCTCTTTATAGGGCCGATAGGCGTGATACACGCAGGCTCTGCGTTACTGGATATTTCACTGATACCCGCAGCATTGG
GTGTCGCCATCCTCTCGACTGCCCTGCCCTATAGCCTGGAGATGATTGCCCTGACGCGCATGTCGGCGCGTACATTTGGC
ACACTGGCAAGCCTGGAACCCGTCTTCGCTGCGCTTTCAGGCCTGATGTTTCTTCATGAAAGCCTTTCACTGACTCAATG
GCTGGCGATCGGCGCAATCATCTTCGCGTCCATCGGTGCAACCCTTGGCTCGGCAAACAGCAAACCTCAACTGGTGCCGG
CCGACTGA

Upstream 100 bases:

>100_bases
AGAGCACGCACACCTTGCGCAATATATTGCCCATTCATTGATTATTCCGCATCATGCGCCATTACCTGTGCCCGGATCAC
ACCCAGGATGTACATCTGAA

Downstream 100 bases:

>100_bases
ACTTACCACGCAGCAAGAAGCCATATGGCACTAGCATTTGTAACGCGCATGCGCCATGTTTGTACCTGACCGATTTATCT
TCGGTGGCTATGCGTTACAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MSEKSRNIASALFPLGLLMIAMVSIQSGASLAKSLFPVVGAQGTTTLRLVFASLILVAVLRPWRANLTAKSLRTVVIYGV
ALGCMNLLFYMSLQTVPLGIAVALEFTGPLAVALLSSRKPIDFLWVTLAVIGLLLLIPLGTSSAAIDLLGAGYALGAGVC
WAAYIVFGHKAGADNGVQTAALGVVIAALFIGPIGVIHAGSALLDISLIPAALGVAILSTALPYSLEMIALTRMSARTFG
TLASLEPVFAALSGLMFLHESLSLTQWLAIGAIIFASIGATLGSANSKPQLVPAD

Sequences:

>Translated_295_residues
MSEKSRNIASALFPLGLLMIAMVSIQSGASLAKSLFPVVGAQGTTTLRLVFASLILVAVLRPWRANLTAKSLRTVVIYGV
ALGCMNLLFYMSLQTVPLGIAVALEFTGPLAVALLSSRKPIDFLWVTLAVIGLLLLIPLGTSSAAIDLLGAGYALGAGVC
WAAYIVFGHKAGADNGVQTAALGVVIAALFIGPIGVIHAGSALLDISLIPAALGVAILSTALPYSLEMIALTRMSARTFG
TLASLEPVFAALSGLMFLHESLSLTQWLAIGAIIFASIGATLGSANSKPQLVPAD
>Mature_294_residues
SEKSRNIASALFPLGLLMIAMVSIQSGASLAKSLFPVVGAQGTTTLRLVFASLILVAVLRPWRANLTAKSLRTVVIYGVA
LGCMNLLFYMSLQTVPLGIAVALEFTGPLAVALLSSRKPIDFLWVTLAVIGLLLLIPLGTSSAAIDLLGAGYALGAGVCW
AAYIVFGHKAGADNGVQTAALGVVIAALFIGPIGVIHAGSALLDISLIPAALGVAILSTALPYSLEMIALTRMSARTFGT
LASLEPVFAALSGLMFLHESLSLTQWLAIGAIIFASIGATLGSANSKPQLVPAD

Specific function: Unknown

COG id: COG5006

COG function: function code R; Predicted permease, DMT superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

Organism=Escherichia coli, GI1787033, Length=269, Percent_Identity=61.3382899628253, Blast_Score=314, Evalue=5e-87,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 30313; Mature: 30181

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEKSRNIASALFPLGLLMIAMVSIQSGASLAKSLFPVVGAQGTTTLRLVFASLILVAVL
CCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
RPWRANLTAKSLRTVVIYGVALGCMNLLFYMSLQTVPLGIAVALEFTGPLAVALLSSRKP
CCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCHHHHHHHHCCCC
IDFLWVTLAVIGLLLLIPLGTSSAAIDLLGAGYALGAGVCWAAYIVFGHKAGADNGVQTA
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHH
ALGVVIAALFIGPIGVIHAGSALLDISLIPAALGVAILSTALPYSLEMIALTRMSARTFG
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
TLASLEPVFAALSGLMFLHESLSLTQWLAIGAIIFASIGATLGSANSKPQLVPAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
SEKSRNIASALFPLGLLMIAMVSIQSGASLAKSLFPVVGAQGTTTLRLVFASLILVAVL
CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
RPWRANLTAKSLRTVVIYGVALGCMNLLFYMSLQTVPLGIAVALEFTGPLAVALLSSRKP
CCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCHHHHHHHHCCCC
IDFLWVTLAVIGLLLLIPLGTSSAAIDLLGAGYALGAGVCWAAYIVFGHKAGADNGVQTA
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHH
ALGVVIAALFIGPIGVIHAGSALLDISLIPAALGVAILSTALPYSLEMIALTRMSARTFG
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
TLASLEPVFAALSGLMFLHESLSLTQWLAIGAIIFASIGATLGSANSKPQLVPAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]