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The map label for this gene is qseB [H]

Identifier: 66046441

GI number: 66046441

Start: 3845458

End: 3846126

Strand: Reverse

Name: qseB [H]

Synonym: Psyr_3212

Alternate gene names: 66046441

Gene position: 3846126-3845458 (Counterclockwise)

Preceding gene: 66046442

Following gene: 66046440

Centisome position: 63.12

GC content: 58.45

Gene sequence:

>669_bases
ATGCGCCTGCTACTGGTTGAAGACCACGTTCCCCTGGCCGATGAGCTGCTCGCTGCGCTGGGGCGTCAAGGCTATGCGGT
CGACTGGCTGGCTGACGGGCGCGATGCGGTTTATCAAGGAGCAAGCGAGCCGTATGACTTGATTGTTCTGGATCTGGGCT
TACCCGGCATGCCAGGGCTCGAGGTTCTTCAGCAGTGGCGCAGCAAAGGTCTGGCGACCCCTGTGTTGATTCTGACCGCG
CGGGGTTCCTGGTCAGAGCGTATAGAAGGTTTGAAGGCAGGCGCTGATGATTACCTGACCAAGCCTTTTCATCCTGAAGA
GCTGCAGCTGCGTATTCAGGCGCTGTTGCGACGTTCGCACGGGCTGGCCAACCAGCCCACGCTGGAATCGGCCGGTCTTA
ATCTGGATGAAGGCCGGCAATGCGTCAGCCGGGATGGCGTGGATATCCAGCTCACCTCGGCTGAGTTTCGTCTGCTGCGT
TATTTCATGCTCCACCCGGGACAGATTCTCTCGAAAAGCCATCTGTCGGAGCATTTGTACGATGGCGAAAACGAGCGTGA
TTCCAATGTTATTGAAGTCCATGTCAATCACCTGAGGCGCAAGTTGGGCCGTGCAGTCGTCGAGACACGCCGTGGCCAGG
GCTATCTGTATGGCGGAGCCGGCGGTTGA

Upstream 100 bases:

>100_bases
ACGTGTATGAATTTGAATTGCTGACCCCTGAGGGCGTTGTTCGCGAGCTCAAGTTCGATGCGCGTGATAGCCGATTGTTG
AAAGACGAGGATGATGACTG

Downstream 100 bases:

>100_bases
AGTCCATACAGCGACGTCTGAGTCTGGGGCTGATCGCCGTCATGGTCGTTGTCGGTCTGGTGATGGCACAGACCAGTCTG
TGGCTGTTCGAAGTGGGCTT

Product: response regulator receiver:transcriptional regulatory protein, C-terminal

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MRLLLVEDHVPLADELLAALGRQGYAVDWLADGRDAVYQGASEPYDLIVLDLGLPGMPGLEVLQQWRSKGLATPVLILTA
RGSWSERIEGLKAGADDYLTKPFHPEELQLRIQALLRRSHGLANQPTLESAGLNLDEGRQCVSRDGVDIQLTSAEFRLLR
YFMLHPGQILSKSHLSEHLYDGENERDSNVIEVHVNHLRRKLGRAVVETRRGQGYLYGGAGG

Sequences:

>Translated_222_residues
MRLLLVEDHVPLADELLAALGRQGYAVDWLADGRDAVYQGASEPYDLIVLDLGLPGMPGLEVLQQWRSKGLATPVLILTA
RGSWSERIEGLKAGADDYLTKPFHPEELQLRIQALLRRSHGLANQPTLESAGLNLDEGRQCVSRDGVDIQLTSAEFRLLR
YFMLHPGQILSKSHLSEHLYDGENERDSNVIEVHVNHLRRKLGRAVVETRRGQGYLYGGAGG
>Mature_222_residues
MRLLLVEDHVPLADELLAALGRQGYAVDWLADGRDAVYQGASEPYDLIVLDLGLPGMPGLEVLQQWRSKGLATPVLILTA
RGSWSERIEGLKAGADDYLTKPFHPEELQLRIQALLRRSHGLANQPTLESAGLNLDEGRQCVSRDGVDIQLTSAEFRLLR
YFMLHPGQILSKSHLSEHLYDGENERDSNVIEVHVNHLRRKLGRAVVETRRGQGYLYGGAGG

Specific function: Member of a two-component regulatory system qseB/qseC [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789402, Length=218, Percent_Identity=44.4954128440367, Blast_Score=186, Evalue=8e-49,
Organism=Escherichia coli, GI1787375, Length=221, Percent_Identity=38.9140271493213, Blast_Score=156, Evalue=1e-39,
Organism=Escherichia coli, GI1790552, Length=216, Percent_Identity=42.5925925925926, Blast_Score=154, Evalue=5e-39,
Organism=Escherichia coli, GI87082012, Length=221, Percent_Identity=38.0090497737557, Blast_Score=154, Evalue=5e-39,
Organism=Escherichia coli, GI1786784, Length=220, Percent_Identity=36.8181818181818, Blast_Score=150, Evalue=6e-38,
Organism=Escherichia coli, GI1786599, Length=224, Percent_Identity=35.2678571428571, Blast_Score=137, Evalue=6e-34,
Organism=Escherichia coli, GI2367329, Length=232, Percent_Identity=39.6551724137931, Blast_Score=123, Evalue=8e-30,
Organism=Escherichia coli, GI1790860, Length=222, Percent_Identity=33.3333333333333, Blast_Score=122, Evalue=2e-29,
Organism=Escherichia coli, GI1788394, Length=202, Percent_Identity=36.6336633663366, Blast_Score=117, Evalue=5e-28,
Organism=Escherichia coli, GI1789809, Length=232, Percent_Identity=33.1896551724138, Blast_Score=111, Evalue=4e-26,
Organism=Escherichia coli, GI1786911, Length=204, Percent_Identity=34.8039215686275, Blast_Score=107, Evalue=6e-25,
Organism=Escherichia coli, GI1787229, Length=224, Percent_Identity=31.6964285714286, Blast_Score=104, Evalue=4e-24,
Organism=Escherichia coli, GI1790863, Length=232, Percent_Identity=31.0344827586207, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI1788550, Length=116, Percent_Identity=33.6206896551724, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1790437, Length=134, Percent_Identity=32.089552238806, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI145693140, Length=236, Percent_Identity=28.3898305084746, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1788713, Length=120, Percent_Identity=30, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 24653; Mature: 24653

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLLVEDHVPLADELLAALGRQGYAVDWLADGRDAVYQGASEPYDLIVLDLGLPGMPGL
CEEEEECCCCCHHHHHHHHHCCCCCEEEEEECCHHHHHCCCCCCCEEEEEECCCCCCCHH
EVLQQWRSKGLATPVLILTARGSWSERIEGLKAGADDYLTKPFHPEELQLRIQALLRRSH
HHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHC
GLANQPTLESAGLNLDEGRQCVSRDGVDIQLTSAEFRLLRYFMLHPGQILSKSHLSEHLY
CCCCCCCHHHCCCCHHHHHHHHHCCCCEEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHC
DGENERDSNVIEVHVNHLRRKLGRAVVETRRGQGYLYGGAGG
CCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCEEEECCCCC
>Mature Secondary Structure
MRLLLVEDHVPLADELLAALGRQGYAVDWLADGRDAVYQGASEPYDLIVLDLGLPGMPGL
CEEEEECCCCCHHHHHHHHHCCCCCEEEEEECCHHHHHCCCCCCCEEEEEECCCCCCCHH
EVLQQWRSKGLATPVLILTARGSWSERIEGLKAGADDYLTKPFHPEELQLRIQALLRRSH
HHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHC
GLANQPTLESAGLNLDEGRQCVSRDGVDIQLTSAEFRLLRYFMLHPGQILSKSHLSEHLY
CCCCCCCHHHCCCCHHHHHHHHHCCCCEEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHC
DGENERDSNVIEVHVNHLRRKLGRAVVETRRGQGYLYGGAGG
CCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]