| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is hflD [H]
Identifier: 66046420
GI number: 66046420
Start: 3820694
End: 3821314
Strand: Direct
Name: hflD [H]
Synonym: Psyr_3191
Alternate gene names: 66046420
Gene position: 3820694-3821314 (Clockwise)
Preceding gene: 66046419
Following gene: 66046421
Centisome position: 62.7
GC content: 61.84
Gene sequence:
>621_bases ATGAGCCCGACTCAGGAACAACTGATCGCTCTGGGCGGTGTATTCCAGGCCGCCGTGCTGGTCGACCGGATCGCCAAGAC CGGTCAGATCAGCGAAGCGGCCCTGAGCTGCATGCTCGGCAGCCTGCTGGTGGTCGACCCCAAGGATACGCTTGACGTTT ACGGCGGCGACGACCTCAACCTGCACGAAGGCTATCGCGCCATGGCCAGCGCCCTGGAGCGTGACCCGGCAACCTTGCAA CGCGAACCGTTGCGCTACGCCCTGTCGATGCTCGGCCTCGAACGCCAGTTGGCCAAGCGCGATGACCTGCTTGAAGTGAT CGGCAAACGCATTCCGGTCATTCAGTCCCAGGTCGAGCATTTCGGCATCGCCCACGAGAACGTGATTGCCGCGACCGGCG CACTGTATCAGGACACCCTGAGCACCTTGCGCCAGCGCATTCAGGTACAAGGCGACATGCGCAACCTGCAGCAGCCGAAC AATGCCTCGAAGATTCGCGGCATTCTGCTGGCCGGTATTCGCTCTGCCCGGCTGTGGCGGCAAGTTGGCGGTCATCGCTG GCAACTGGTGTTCAGCCGCCGCAAGTTGTTGAAAGAACTCTATCCATTGCTGCACGGCTGA
Upstream 100 bases:
>100_bases TCACCCCCGGCCAGTCCGTGGTGTTCTACGACGGCGAAATCTGTCTGGGCGGCGGCGTGATCGAAATTGCCGAACCCTGG ACCACCAAGGACAAGCGTTG
Downstream 100 bases:
>100_bases CCCGCCGCGCGCCAATGACCTTCACCACCCCAGGCACGACGCTGTCTACGCTGGTCAGCGGGCTCCGGTCCGACTGACTT TTCATGTATGATATGCGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 206; Mature: 205
Protein sequence:
>206_residues MSPTQEQLIALGGVFQAAVLVDRIAKTGQISEAALSCMLGSLLVVDPKDTLDVYGGDDLNLHEGYRAMASALERDPATLQ REPLRYALSMLGLERQLAKRDDLLEVIGKRIPVIQSQVEHFGIAHENVIAATGALYQDTLSTLRQRIQVQGDMRNLQQPN NASKIRGILLAGIRSARLWRQVGGHRWQLVFSRRKLLKELYPLLHG
Sequences:
>Translated_206_residues MSPTQEQLIALGGVFQAAVLVDRIAKTGQISEAALSCMLGSLLVVDPKDTLDVYGGDDLNLHEGYRAMASALERDPATLQ REPLRYALSMLGLERQLAKRDDLLEVIGKRIPVIQSQVEHFGIAHENVIAATGALYQDTLSTLRQRIQVQGDMRNLQQPN NASKIRGILLAGIRSARLWRQVGGHRWQLVFSRRKLLKELYPLLHG >Mature_205_residues SPTQEQLIALGGVFQAAVLVDRIAKTGQISEAALSCMLGSLLVVDPKDTLDVYGGDDLNLHEGYRAMASALERDPATLQR EPLRYALSMLGLERQLAKRDDLLEVIGKRIPVIQSQVEHFGIAHENVIAATGALYQDTLSTLRQRIQVQGDMRNLQQPNN ASKIRGILLAGIRSARLWRQVGGHRWQLVFSRRKLLKELYPLLHG
Specific function: Unknown
COG id: COG2915
COG function: function code R; Uncharacterized protein involved in purine metabolism
Gene ontology:
Cell location: Cytoplasm. Cell inner membrane; Peripheral membrane protein; Cytoplasmic side [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hflD family [H]
Homologues:
Organism=Escherichia coli, GI1787377, Length=192, Percent_Identity=41.1458333333333, Blast_Score=139, Evalue=1e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007451 - ProDom: PD037115 [H]
Pfam domain/function: PF04356 DUF489 [H]
EC number: NA
Molecular weight: Translated: 22913; Mature: 22782
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPTQEQLIALGGVFQAAVLVDRIAKTGQISEAALSCMLGSLLVVDPKDTLDVYGGDDLN CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEECCCHHHCCCCCCCCC LHEGYRAMASALERDPATLQREPLRYALSMLGLERQLAKRDDLLEVIGKRIPVIQSQVEH HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH FGIAHENVIAATGALYQDTLSTLRQRIQVQGDMRNLQQPNNASKIRGILLAGIRSARLWR HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH QVGGHRWQLVFSRRKLLKELYPLLHG HHCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SPTQEQLIALGGVFQAAVLVDRIAKTGQISEAALSCMLGSLLVVDPKDTLDVYGGDDLN CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEECCCHHHCCCCCCCCC LHEGYRAMASALERDPATLQREPLRYALSMLGLERQLAKRDDLLEVIGKRIPVIQSQVEH HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH FGIAHENVIAATGALYQDTLSTLRQRIQVQGDMRNLQQPNNASKIRGILLAGIRSARLWR HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH QVGGHRWQLVFSRRKLLKELYPLLHG HHCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA