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The map label for this gene is ydeR [H]

Identifier: 66046367

GI number: 66046367

Start: 3763772

End: 3764968

Strand: Direct

Name: ydeR [H]

Synonym: Psyr_3138

Alternate gene names: 66046367

Gene position: 3763772-3764968 (Clockwise)

Preceding gene: 66046361

Following gene: 66046368

Centisome position: 61.76

GC content: 63.24

Gene sequence:

>1197_bases
ATGCCCCACTCGTCCCAATCCCCGCACAACGCTATGACCATGACCCCGGCCATGGTCATGCTGTTCGCCTTCTGCTGCGG
CGCGATTGTCGCCAACATCTACTACGCACAGCCGATCATCGAGCTGATTGCGCCGGACATCGGGCTGTCGAGCACGGCGG
CCAGTCTGATTGTCTCGTTGACGCAGATCGGTTACGCCCTGGGTTTGTTCTTTCTGGTGCCGCTGGGTGACTTGCTGGAG
AACCGCAGGCTGATGCTGGTGACGACTGTCGTCGCGATTCTCAGCCTGCTGGGTGCCGCCTTCGCCGAGCAGCCGAATGT
GTTTTTGCTGGTCTCGCTGCTGGTGGGCTTCAGTTCAGTATCGGTGCAGATGCTCATTCCGTTGGCGGCGCATCTGGCTC
CGGAGGAGTCGCGTGGGCGGGTCGTTGGCGGGATCATGGGCGGACTGCTGCTGGGGATTCTGCTGGCGCGGCCGATTGCC
AGTCTGGTGGCCGACCATTTCGGCTGGCGGGCGGTGTTTGGATCGGCGGCCGTGGTGATGATCGGCATCAGCGTGGTACT
GGCGACCACCATGCCAAAACGCCTCCCGGATCATCGCGCGTCCTACGGCCAGTTGCTGTTCTCGCTGTGGACTCTCCTTC
GTACCCAGCCGGTGCTGCGTCAGCGTGCCTTTTATCAGGCGTGCATGTTCGCAACCTTCAGCCTGTTCTGGACCGCCGTC
CCGCTGGAGCTGTCACGCAATCATGGGCTGTCGCAAACGCAGATCGCGATCTTCGCCCTGATCGGCGCGATCGGCGCCAT
TGCCGCGCCCATCAGCGGCCGACTGGCAGACGCTGGCTACACCCGCATCGCCTCACTGGGCGCGCTGCTGTTCGGCGCGC
TGAGCTTTCTTCCCGGCCTGGTTCATCCAGCGTACAGCGTGATTGGCCTGGCCATAACGGGCGTAGTGCTGGATTTCTGC
GTGCAGACCAGCATGGTCCTGGGCCAGCGCACGGTCTACGCGCTGGATGCCGCCAGCCGCAGCCGCCTCAACGCGCTGTA
CATGACCAGTATTTTCATCGGCGGCGCGATTGGCTCGGCAGTCGCCAGCCCACTGTTTGATCACGGTGGCTGGACCTGGG
TACTGATCGCCGGCACGGCACTGCCGCTGATTGCACTGCTCGCGCTGCTCAGGGATCGATCCAGGCAGAATGCGTAA

Upstream 100 bases:

>100_bases
CTTAATGGCCGACAAAACCGTTAGCCTGCGCTGCATCGATCAAAAACCGTCTGACAGACACGCTTTCACGTCTGGCAGTC
CCTGCTCAAGCGAGACTTTC

Downstream 100 bases:

>100_bases
ACGCTGCACTTTGTAACTGATTTACAGGATAATGCCGCGGCAATGGCATCGGCCATTGCCCTTCTGGCTCTCTCTCGCAC
CTAAAGGCTCGCGTATCCGA

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 398; Mature: 397

Protein sequence:

>398_residues
MPHSSQSPHNAMTMTPAMVMLFAFCCGAIVANIYYAQPIIELIAPDIGLSSTAASLIVSLTQIGYALGLFFLVPLGDLLE
NRRLMLVTTVVAILSLLGAAFAEQPNVFLLVSLLVGFSSVSVQMLIPLAAHLAPEESRGRVVGGIMGGLLLGILLARPIA
SLVADHFGWRAVFGSAAVVMIGISVVLATTMPKRLPDHRASYGQLLFSLWTLLRTQPVLRQRAFYQACMFATFSLFWTAV
PLELSRNHGLSQTQIAIFALIGAIGAIAAPISGRLADAGYTRIASLGALLFGALSFLPGLVHPAYSVIGLAITGVVLDFC
VQTSMVLGQRTVYALDAASRSRLNALYMTSIFIGGAIGSAVASPLFDHGGWTWVLIAGTALPLIALLALLRDRSRQNA

Sequences:

>Translated_398_residues
MPHSSQSPHNAMTMTPAMVMLFAFCCGAIVANIYYAQPIIELIAPDIGLSSTAASLIVSLTQIGYALGLFFLVPLGDLLE
NRRLMLVTTVVAILSLLGAAFAEQPNVFLLVSLLVGFSSVSVQMLIPLAAHLAPEESRGRVVGGIMGGLLLGILLARPIA
SLVADHFGWRAVFGSAAVVMIGISVVLATTMPKRLPDHRASYGQLLFSLWTLLRTQPVLRQRAFYQACMFATFSLFWTAV
PLELSRNHGLSQTQIAIFALIGAIGAIAAPISGRLADAGYTRIASLGALLFGALSFLPGLVHPAYSVIGLAITGVVLDFC
VQTSMVLGQRTVYALDAASRSRLNALYMTSIFIGGAIGSAVASPLFDHGGWTWVLIAGTALPLIALLALLRDRSRQNA
>Mature_397_residues
PHSSQSPHNAMTMTPAMVMLFAFCCGAIVANIYYAQPIIELIAPDIGLSSTAASLIVSLTQIGYALGLFFLVPLGDLLEN
RRLMLVTTVVAILSLLGAAFAEQPNVFLLVSLLVGFSSVSVQMLIPLAAHLAPEESRGRVVGGIMGGLLLGILLARPIAS
LVADHFGWRAVFGSAAVVMIGISVVLATTMPKRLPDHRASYGQLLFSLWTLLRTQPVLRQRAFYQACMFATFSLFWTAVP
LELSRNHGLSQTQIAIFALIGAIGAIAAPISGRLADAGYTRIASLGALLFGALSFLPGLVHPAYSVIGLAITGVVLDFCV
QTSMVLGQRTVYALDAASRSRLNALYMTSIFIGGAIGSAVASPLFDHGGWTWVLIAGTALPLIALLALLRDRSRQNA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 42148; Mature: 42016

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PHSSQSPHNAMTMTPAMVMLFAFCCGAIVANIYYAQPIIELIAPDIGLSSTAASLIVSL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
TQIGYALGLFFLVPLGDLLENRRLMLVTTVVAILSLLGAAFAEQPNVFLLVSLLVGFSSV
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHH
SVQMLIPLAAHLAPEESRGRVVGGIMGGLLLGILLARPIASLVADHFGWRAVFGSAAVVM
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
IGISVVLATTMPKRLPDHRASYGQLLFSLWTLLRTQPVLRQRAFYQACMFATFSLFWTAV
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
PLELSRNHGLSQTQIAIFALIGAIGAIAAPISGRLADAGYTRIASLGALLFGALSFLPGL
HHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VHPAYSVIGLAITGVVLDFCVQTSMVLGQRTVYALDAASRSRLNALYMTSIFIGGAIGSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEECHHHHHHHHHHHHHHHHHHHHHHHH
VASPLFDHGGWTWVLIAGTALPLIALLALLRDRSRQNA
HHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]