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The map label for this gene is rutA [H]

Identifier: 66046296

GI number: 66046296

Start: 3665181

End: 3666359

Strand: Direct

Name: rutA [H]

Synonym: Psyr_3065

Alternate gene names: 66046296

Gene position: 3665181-3666359 (Clockwise)

Preceding gene: 66046295

Following gene: 66046313

Centisome position: 60.15

GC content: 57.59

Gene sequence:

>1179_bases
ATGCGCGCTGAAAAATCCTATCCGATAAAAACCAACCCGATGCGCAGCAGCGCGAACAAGATACAGCTGGGTGTTTTCTC
CACCAATACCGAGGGCGGCTGCACCGTCACCAACGCGCCTGAACGCCTGCGCGGAGACGATTGGGCAGGCAACCTGGAAA
TCGCCCGGATTGCCGACGATGCAGGGTTTGAAGCCTTCATACCGGTCGGCCGCTGGAAAGGTTTCGGCGGCACCAACAAT
ACCGGCGGTGTCTGTTTCGAAACCTACACCTGGGCTGCCGGGATTGCAGCCCTGACCAGTCAGATCGCCGTGTTCACCAC
CTCGCACCTGCCCACCGTGCACCCGCTGTTCGCGGCCAAACAGGCGGTGACCATCGACCACATCAGCGGCGGGCGCTTCG
GGCTGAATATCCTTTGCGGTTGGTATGGCGCGGAAATGCGCATGTTCAACGGCCATATGATGGAGCACGACAAACGCTAC
GACTACGCAGAAGAGTGGCTGCACATTGCAAAAAATGCCTGGGAGCAGCAGACCCCGTTCGACTTCAAAGGCGAGTATTT
CAACATCTGCGGCGCAATCTCGCAGCCACAACCTCTGAATAAACCCTACCTGATCAACGCAGGGGGGTCGCCACGCGGCA
AACTCTTCTGTGCAGAACATTGCGACGCCGCGTTCCTGATCGTCAAACATCTGGACGGCGAACAGGCCGTGCGTGAGCAG
ATTGCATCCTACAAGGACCTGGCGAAACAGAAGTTCGGCCGCGACATAAAGATATGGTGTTATGGCTATGTGGTGCAGAA
GGACACGCAAGAGGAAGCAGACGCTTACCTGGACTATTACGCCAACCAGGTCGGTGACGATGAGGGCTGCGACATCATCA
CCGGCGAGCTGGGTATCCAGACCGGCATTTTCACCCCCGAAGACGCCGTGCGTTTCCGTTTCCATTTCAAGGCCGGATTC
GCCGGGGTGCCACTGGTAGGCACACCCGAGAAGATCGTGGAGCTGTTCAGGAAATATTCTGACTGGGGGATCGACGGCAT
TGCCCTGACGTGGCTCGATTACCATGAGGGTATAAAGGACTTCGTGAGGGAAACACTGCCACTGATGGAGGACGCGGGCC
TGCGTGAATCCAGGGTTGTGGAGGCGATGACTTCGAAGGTGTCCGCAGAAGTAGCCTGA

Upstream 100 bases:

>100_bases
CGGGGTGATCATGCCTGACCGAATACTTCGTCGGCACGGCCACCGCAGGTTCAGGATGTAGCAAGGACGAACGATCCAAC
TATCGACCTGGGAGGTCACG

Downstream 100 bases:

>100_bases
TGGCCGGGCCTCCCTGGCGGTGCTGGCCAGGGAGGCGCTTATCCGGACAGCTTAAAGGGCCAACATGCGTTGCGGATTCA
GCAGCGTCACCTCGGTGCGG

Product: luciferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 392

Protein sequence:

>392_residues
MRAEKSYPIKTNPMRSSANKIQLGVFSTNTEGGCTVTNAPERLRGDDWAGNLEIARIADDAGFEAFIPVGRWKGFGGTNN
TGGVCFETYTWAAGIAALTSQIAVFTTSHLPTVHPLFAAKQAVTIDHISGGRFGLNILCGWYGAEMRMFNGHMMEHDKRY
DYAEEWLHIAKNAWEQQTPFDFKGEYFNICGAISQPQPLNKPYLINAGGSPRGKLFCAEHCDAAFLIVKHLDGEQAVREQ
IASYKDLAKQKFGRDIKIWCYGYVVQKDTQEEADAYLDYYANQVGDDEGCDIITGELGIQTGIFTPEDAVRFRFHFKAGF
AGVPLVGTPEKIVELFRKYSDWGIDGIALTWLDYHEGIKDFVRETLPLMEDAGLRESRVVEAMTSKVSAEVA

Sequences:

>Translated_392_residues
MRAEKSYPIKTNPMRSSANKIQLGVFSTNTEGGCTVTNAPERLRGDDWAGNLEIARIADDAGFEAFIPVGRWKGFGGTNN
TGGVCFETYTWAAGIAALTSQIAVFTTSHLPTVHPLFAAKQAVTIDHISGGRFGLNILCGWYGAEMRMFNGHMMEHDKRY
DYAEEWLHIAKNAWEQQTPFDFKGEYFNICGAISQPQPLNKPYLINAGGSPRGKLFCAEHCDAAFLIVKHLDGEQAVREQ
IASYKDLAKQKFGRDIKIWCYGYVVQKDTQEEADAYLDYYANQVGDDEGCDIITGELGIQTGIFTPEDAVRFRFHFKAGF
AGVPLVGTPEKIVELFRKYSDWGIDGIALTWLDYHEGIKDFVRETLPLMEDAGLRESRVVEAMTSKVSAEVA
>Mature_392_residues
MRAEKSYPIKTNPMRSSANKIQLGVFSTNTEGGCTVTNAPERLRGDDWAGNLEIARIADDAGFEAFIPVGRWKGFGGTNN
TGGVCFETYTWAAGIAALTSQIAVFTTSHLPTVHPLFAAKQAVTIDHISGGRFGLNILCGWYGAEMRMFNGHMMEHDKRY
DYAEEWLHIAKNAWEQQTPFDFKGEYFNICGAISQPQPLNKPYLINAGGSPRGKLFCAEHCDAAFLIVKHLDGEQAVREQ
IASYKDLAKQKFGRDIKIWCYGYVVQKDTQEEADAYLDYYANQVGDDEGCDIITGELGIQTGIFTPEDAVRFRFHFKAGF
AGVPLVGTPEKIVELFRKYSDWGIDGIALTWLDYHEGIKDFVRETLPLMEDAGLRESRVVEAMTSKVSAEVA

Specific function: Catalyzes the pyrimidine ring opening between N-3 and C- 4 by an unusual flavin hydroperoxide-catalyzed mechanism to yield ureidoacrylate peracid. It cleaves pyrmidine rings directly by adding oxygen atoms, making a toxic ureidoacrylate peracid product wh

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ntaA/snaA/soxA(dszA) monooxygenase family. RutA subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787247, Length=364, Percent_Identity=28.5714285714286, Blast_Score=125, Evalue=4e-30,
Organism=Escherichia coli, GI1787166, Length=344, Percent_Identity=23.546511627907, Blast_Score=70, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011251
- InterPro:   IPR019914
- InterPro:   IPR016048 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: NA

Molecular weight: Translated: 43636; Mature: 43636

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAEKSYPIKTNPMRSSANKIQLGVFSTNTEGGCTVTNAPERLRGDDWAGNLEIARIADD
CCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEECCCHHHHCCCCCCCCEEEEEEECC
AGFEAFIPVGRWKGFGGTNNTGGVCFETYTWAAGIAALTSQIAVFTTSHLPTVHPLFAAK
CCCEEEEECCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHCC
QAVTIDHISGGRFGLNILCGWYGAEMRMFNGHMMEHDKRYDYAEEWLHIAKNAWEQQTPF
CEEEEEECCCCCEEEEEEEEEECCEEEEECCCHHCCCCCCCHHHHHHHHHHHHHCCCCCC
DFKGEYFNICGAISQPQPLNKPYLINAGGSPRGKLFCAEHCDAAFLIVKHLDGEQAVREQ
CCCCCCEEEECCCCCCCCCCCCEEEECCCCCCCCEEECCCCCEEEEEEEECCCHHHHHHH
IASYKDLAKQKFGRDIKIWCYGYVVQKDTQEEADAYLDYYANQVGDDEGCDIITGELGIQ
HHHHHHHHHHHHCCEEEEEEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCC
TGIFTPEDAVRFRFHFKAGFAGVPLVGTPEKIVELFRKYSDWGIDGIALTWLDYHEGIKD
CCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHH
FVRETLPLMEDAGLRESRVVEAMTSKVSAEVA
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRAEKSYPIKTNPMRSSANKIQLGVFSTNTEGGCTVTNAPERLRGDDWAGNLEIARIADD
CCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEECCCHHHHCCCCCCCCEEEEEEECC
AGFEAFIPVGRWKGFGGTNNTGGVCFETYTWAAGIAALTSQIAVFTTSHLPTVHPLFAAK
CCCEEEEECCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHCC
QAVTIDHISGGRFGLNILCGWYGAEMRMFNGHMMEHDKRYDYAEEWLHIAKNAWEQQTPF
CEEEEEECCCCCEEEEEEEEEECCEEEEECCCHHCCCCCCCHHHHHHHHHHHHHCCCCCC
DFKGEYFNICGAISQPQPLNKPYLINAGGSPRGKLFCAEHCDAAFLIVKHLDGEQAVREQ
CCCCCCEEEECCCCCCCCCCCCEEEECCCCCCCCEEECCCCCEEEEEEEECCCHHHHHHH
IASYKDLAKQKFGRDIKIWCYGYVVQKDTQEEADAYLDYYANQVGDDEGCDIITGELGIQ
HHHHHHHHHHHHCCEEEEEEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCC
TGIFTPEDAVRFRFHFKAGFAGVPLVGTPEKIVELFRKYSDWGIDGIALTWLDYHEGIKD
CCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHH
FVRETLPLMEDAGLRESRVVEAMTSKVSAEVA
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA