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The map label for this gene is prtC [H]

Identifier: 66046290

GI number: 66046290

Start: 3657318

End: 3658925

Strand: Reverse

Name: prtC [H]

Synonym: Psyr_3059

Alternate gene names: 66046290

Gene position: 3658925-3657318 (Counterclockwise)

Preceding gene: 66046292

Following gene: 66046289

Centisome position: 60.04

GC content: 57.03

Gene sequence:

>1608_bases
ATGCCCGGCCCAAATGAATCAAGTCCTGCCGAACTTCTGCCCGAGGGAGCTCCCGACGACCGAGTCACCAGCCTGTTATG
GGGGCCATTCTGGCTTGGGGATTCGTCCGGCACCCATCTGACTTACAGTTTTCATAAGGCCGACTCTGTCTACGCCACTG
ATTACAGTCGCTCTCAAGAGCCCGGCGATGCCTATTCGCTGACCGACGCCCAGGCGGCAGCCGCAAAAAGCGCACTGGAT
GCCTGGAGTGCGGTGGCAGATATCAAGTTCACCGAGGTTCAGGACACCCCCGATAATGTCGGAGACATCCGTTTCGGTGG
CTTCAAGGGACTGCAAGGCACCGAGTTTGGCCAGGCTTATGCGCCGGGTACGCTGGGTCGCTCCGGCGATGTCTGGATCG
GGCCGAACGTCAACGCGGCCGATCCTGCCAAGGGCACGGATGATTACCTCACGTTCATGCATGAAACCGGTCATGCACTG
GGCTTGAAGCATTCGTTCGAAGCCTCGCAGTACAACGATGTTCTGCTGGATGCCAAATTCGAAGATGCGCGTTACACCAT
CATGAGCTACACCAACAATTACAGCTTCAAGCCCACCACGCCGATGTTGCTCGATATCGCGGCCATGCAGTTTATATACG
GTGCCAACACCCACTATCATACCGGCGACGACGTCTATAAATGGGCACCTGGGCAGTCGGTATTCGAGACCATCTGGGAC
GCTGGCGGCAAAGACACCATTGATGCCAGCAATCAGGAAGCATCGGTGAAAATCAACCTCAACGAGGGTGAGTTCAGCAC
CATCGGCAAGGCGTTTCTCGATTACAACGCGAACCCTGATGCACCGACGTCGATGAATTCCGGTCTGGCGATCGCCTACG
GGGCGCACATCGAAAACGCCATAGGTTCCGCTTTCAATGACACGCTGATCGGCAACGAACTGGATAACGTGCTCAATGGC
CGCGGCGGTCTGGATACCATGGTCGGCGGGCTGGGCAACGATACCTACGTCATCGATCAGGCAGGCGAACTGGACCTGGT
TCAGGAAAAGGCCGATCAGGGCATCGATACGCTGAAGATCACCTACGACAATACCTCGCCCATTGCCCAGGTCATCAACC
TCAATGCCGGGACGTTGGCGAACTTCGAGAATGTCCACCTCAAAGGTGAGGGTGCGTTCACCGTGCTGGGCAATGATCGC
AACAACACCCTGACCGGCAATGACGCGGACAACGTTCTTTTCGGCGGCGCCGGCAATGACAAACTGGTAGGCGGTCAGGG
CGCCGATATCATGACTGGCGGTAGCGGCGCTGACCGTTTCGTGTTCAACAACCTGTCGGAAATGGGCAAAGGCCACAACA
GCGACGTGATTACCGACTTCAATAGCCAGCAAGGCGACAAACTGAGCTTCTTGAAGATGGATGCCAACGTGGACACCAAA
GCCCTCGATGCTTTCAGCTTCATCGGTAGCGGCGAGTTCACCGGCGCTGGCCAGCTGCGTTTCGCTGACCATGTGCTGTC
CGGTAACGTCAACGGCGACCTGCATGCGGACTTTGAAATCCAGCTGGTCGGCGTCAGCGAGTTCCATGCCCATGATCTGG
CGGTCTGA

Upstream 100 bases:

>100_bases
TCCATATTTTGCGTGCCGTGTAATAAACTGCTTTCGGTTTTTGCCTTGGCAGAAGTCGTGAGCCCATTAATAACGTCCGT
ATTCTTCTGGAGCAACGCCG

Downstream 100 bases:

>100_bases
TCGCTGATCTGAAAGACCGATCTCAATGACAGGACTGCGCCGCTGACAGGCGCAGTCCTTTCTGGCCGATTTTCCCCCCT
TCTTTTCTGGTTTCAATCGC

Product: hemolysin-type calcium-binding region:peptidase M10A and M12B, matrixin and adamalysin

Products: NA

Alternate protein names: ProC [H]

Number of amino acids: Translated: 535; Mature: 534

Protein sequence:

>535_residues
MPGPNESSPAELLPEGAPDDRVTSLLWGPFWLGDSSGTHLTYSFHKADSVYATDYSRSQEPGDAYSLTDAQAAAAKSALD
AWSAVADIKFTEVQDTPDNVGDIRFGGFKGLQGTEFGQAYAPGTLGRSGDVWIGPNVNAADPAKGTDDYLTFMHETGHAL
GLKHSFEASQYNDVLLDAKFEDARYTIMSYTNNYSFKPTTPMLLDIAAMQFIYGANTHYHTGDDVYKWAPGQSVFETIWD
AGGKDTIDASNQEASVKINLNEGEFSTIGKAFLDYNANPDAPTSMNSGLAIAYGAHIENAIGSAFNDTLIGNELDNVLNG
RGGLDTMVGGLGNDTYVIDQAGELDLVQEKADQGIDTLKITYDNTSPIAQVINLNAGTLANFENVHLKGEGAFTVLGNDR
NNTLTGNDADNVLFGGAGNDKLVGGQGADIMTGGSGADRFVFNNLSEMGKGHNSDVITDFNSQQGDKLSFLKMDANVDTK
ALDAFSFIGSGEFTGAGQLRFADHVLSGNVNGDLHADFEIQLVGVSEFHAHDLAV

Sequences:

>Translated_535_residues
MPGPNESSPAELLPEGAPDDRVTSLLWGPFWLGDSSGTHLTYSFHKADSVYATDYSRSQEPGDAYSLTDAQAAAAKSALD
AWSAVADIKFTEVQDTPDNVGDIRFGGFKGLQGTEFGQAYAPGTLGRSGDVWIGPNVNAADPAKGTDDYLTFMHETGHAL
GLKHSFEASQYNDVLLDAKFEDARYTIMSYTNNYSFKPTTPMLLDIAAMQFIYGANTHYHTGDDVYKWAPGQSVFETIWD
AGGKDTIDASNQEASVKINLNEGEFSTIGKAFLDYNANPDAPTSMNSGLAIAYGAHIENAIGSAFNDTLIGNELDNVLNG
RGGLDTMVGGLGNDTYVIDQAGELDLVQEKADQGIDTLKITYDNTSPIAQVINLNAGTLANFENVHLKGEGAFTVLGNDR
NNTLTGNDADNVLFGGAGNDKLVGGQGADIMTGGSGADRFVFNNLSEMGKGHNSDVITDFNSQQGDKLSFLKMDANVDTK
ALDAFSFIGSGEFTGAGQLRFADHVLSGNVNGDLHADFEIQLVGVSEFHAHDLAV
>Mature_534_residues
PGPNESSPAELLPEGAPDDRVTSLLWGPFWLGDSSGTHLTYSFHKADSVYATDYSRSQEPGDAYSLTDAQAAAAKSALDA
WSAVADIKFTEVQDTPDNVGDIRFGGFKGLQGTEFGQAYAPGTLGRSGDVWIGPNVNAADPAKGTDDYLTFMHETGHALG
LKHSFEASQYNDVLLDAKFEDARYTIMSYTNNYSFKPTTPMLLDIAAMQFIYGANTHYHTGDDVYKWAPGQSVFETIWDA
GGKDTIDASNQEASVKINLNEGEFSTIGKAFLDYNANPDAPTSMNSGLAIAYGAHIENAIGSAFNDTLIGNELDNVLNGR
GGLDTMVGGLGNDTYVIDQAGELDLVQEKADQGIDTLKITYDNTSPIAQVINLNAGTLANFENVHLKGEGAFTVLGNDRN
NTLTGNDADNVLFGGAGNDKLVGGQGADIMTGGSGADRFVFNNLSEMGKGHNSDVITDFNSQQGDKLSFLKMDANVDTKA
LDAFSFIGSGEFTGAGQLRFADHVLSGNVNGDLHADFEIQLVGVSEFHAHDLAV

Specific function: Unknown

COG id: COG2931

COG function: function code Q; RTX toxins and related Ca2+-binding proteins

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 hemolysin-type calcium-binding repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018511
- InterPro:   IPR001343
- InterPro:   IPR001818
- InterPro:   IPR016294
- InterPro:   IPR013858
- InterPro:   IPR006026
- InterPro:   IPR011049 [H]

Pfam domain/function: PF00353 HemolysinCabind; PF00413 Peptidase_M10; PF08548 Peptidase_M10_C [H]

EC number: NA

Molecular weight: Translated: 56955; Mature: 56823

Theoretical pI: Translated: 4.10; Mature: 4.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGPNESSPAELLPEGAPDDRVTSLLWGPFWLGDSSGTHLTYSFHKADSVYATDYSRSQE
CCCCCCCCCHHHCCCCCCHHHHHHHHCCCEEECCCCCCEEEEEEECCCCEEEECCCCCCC
PGDAYSLTDAQAAAAKSALDAWSAVADIKFTEVQDTPDNVGDIRFGGFKGLQGTEFGQAY
CCCCEECCHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCEEECCCCCCCCCCCCCCC
APGTLGRSGDVWIGPNVNAADPAKGTDDYLTFMHETGHALGLKHSFEASQYNDVLLDAKF
CCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHCCCEECCCCCCCCCCCCCEEEEEEE
EDARYTIMSYTNNYSFKPTTPMLLDIAAMQFIYGANTHYHTGDDVYKWAPGQSVFETIWD
CCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCEECCCCCEEECCCHHHHHHHHC
AGGKDTIDASNQEASVKINLNEGEFSTIGKAFLDYNANPDAPTSMNSGLAIAYGAHIENA
CCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCHHHHH
IGSAFNDTLIGNELDNVLNGRGGLDTMVGGLGNDTYVIDQAGELDLVQEKADQGIDTLKI
HHHHHCCCCCCCHHHHHHCCCCCHHHHHCCCCCCEEEEECCCCCHHHHHHHHCCCEEEEE
TYDNTSPIAQVINLNAGTLANFENVHLKGEGAFTVLGNDRNNTLTGNDADNVLFGGAGND
EECCCCCHHHHEECCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCCCEEECCCCCC
KLVGGQGADIMTGGSGADRFVFNNLSEMGKGHNSDVITDFNSQQGDKLSFLKMDANVDTK
CEECCCCCEEEECCCCCCHHHHHCHHHHCCCCCCCEEECCCCCCCCEEEEEEECCCCCHH
ALDAFSFIGSGEFTGAGQLRFADHVLSGNVNGDLHADFEIQLVGVSEFHAHDLAV
HHHHHHHCCCCCCCCCCCEEEEHHHCCCCCCCCEECCEEEEEEECCHHCCHHCCC
>Mature Secondary Structure 
PGPNESSPAELLPEGAPDDRVTSLLWGPFWLGDSSGTHLTYSFHKADSVYATDYSRSQE
CCCCCCCCHHHCCCCCCHHHHHHHHCCCEEECCCCCCEEEEEEECCCCEEEECCCCCCC
PGDAYSLTDAQAAAAKSALDAWSAVADIKFTEVQDTPDNVGDIRFGGFKGLQGTEFGQAY
CCCCEECCHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCEEECCCCCCCCCCCCCCC
APGTLGRSGDVWIGPNVNAADPAKGTDDYLTFMHETGHALGLKHSFEASQYNDVLLDAKF
CCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHCCCEECCCCCCCCCCCCCEEEEEEE
EDARYTIMSYTNNYSFKPTTPMLLDIAAMQFIYGANTHYHTGDDVYKWAPGQSVFETIWD
CCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCEECCCCCEEECCCHHHHHHHHC
AGGKDTIDASNQEASVKINLNEGEFSTIGKAFLDYNANPDAPTSMNSGLAIAYGAHIENA
CCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCHHHHH
IGSAFNDTLIGNELDNVLNGRGGLDTMVGGLGNDTYVIDQAGELDLVQEKADQGIDTLKI
HHHHHCCCCCCCHHHHHHCCCCCHHHHHCCCCCCEEEEECCCCCHHHHHHHHCCCEEEEE
TYDNTSPIAQVINLNAGTLANFENVHLKGEGAFTVLGNDRNNTLTGNDADNVLFGGAGND
EECCCCCHHHHEECCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCCCEEECCCCCC
KLVGGQGADIMTGGSGADRFVFNNLSEMGKGHNSDVITDFNSQQGDKLSFLKMDANVDTK
CEECCCCCEEEECCCCCCHHHHHCHHHHCCCCCCCEEECCCCCCCCEEEEEEECCCCCHH
ALDAFSFIGSGEFTGAGQLRFADHVLSGNVNGDLHADFEIQLVGVSEFHAHDLAV
HHHHHHHCCCCCCCCCCCEEEEHHHCCCCCCCCEECCEEEEEEECCHHCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2211614; 2722818 [H]