| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66046264
Identifier: 66046264
GI number: 66046264
Start: 3631486
End: 3632364
Strand: Direct
Name: 66046264
Synonym: Psyr_3033
Alternate gene names: NA
Gene position: 3631486-3632364 (Clockwise)
Preceding gene: 66046263
Following gene: 66046265
Centisome position: 59.59
GC content: 60.07
Gene sequence:
>879_bases ATGACCCCGCAGAACCCGTCAGCACGTTTTTTCCCGACCTTTCTGGCCCTTGTGGCGCTGATGCTCAGCCTGTGCGTAGC ACCGGCATGGGCTGCAGAAAAAAGCGCCAAGCGCGGCATCGCCTACGACATCGCCCTGCCCGCCGACCTGAGTGCGTTAT CTGCAGGCGTGAGCTGGTGGTACAACTGGAGCCCCAGGCCCCACGACCGCCTGGCGTCGTACGACTACGCCTCGATGTAC GGCGTGGATTTCATTCCGATGGTATGGAACGGCAACGTTGACGACGGGCAGTTGAAGCAATACCTGCTGGCTCACTCAGC CATCCGCTATCTGCTGGTGATCAATGAGCCGAATCTGCTCGATCAGGCCAACATGACGCCCGAAGCGGCGGCCGGCTTCT GGCCGAGACTGGAACAGATCGCCGCCCAGACCGGCGTAAAACTGGTGGGGCCAGCGATGAACTGGGGAACCATGCCGGGC TACGGTGACCCGGTCGTGTGGCTCGATGCCTTCTACACAGCCTATCGGTCGATGAATCAGAATCGCGACCCGCGCATCGA TTACCTGGCTTTTCACTGGTACGACTATGGCTTGCCAGGGATGCTCGACCGGCTGTCGAAGTACGGAAAACCCTTCTGGG TCACCGAGTTCGCCAATTGGCACGCTCCGGATGACGGAGCGCAGATTGATTCGGTCGACAAGCAGAAGCGGCAGATGGCG GAAATGGTCGCCACCCTTGAGCAGCGCCAGGACGTGTTCAGATACGCCTGGTTCACCGGCCGGATGAACCCTGACCCGCA CTTTTCAAGTTTGCTGGACGCTGAGGGCAAGCTGACTGAGATGGGCCAGTATTACCTGTCGCTGCCACACAGCGAGTAA
Upstream 100 bases:
>100_bases GGGTTTGGCAGGGTATACGGGACGATACAGGTGGCATGCTTTCTGCTGGCTGACGGCAGCGCATGCTCTGCACCTCTCCA CCCTCAAGGAAGATTTGCCA
Downstream 100 bases:
>100_bases GCCCTTGCGGCTCGGTCAACGCATTTTCGCAGCCTCTCAGCGAGGCTGCGCCGATCTCGGTCAGACCGCTGATGATGTGC TGGGTGTAGGGAAATGAATG
Product: hypothetical protein
Products: NA
Alternate protein names: Glycosyl Hydrolase; Phosphoribosylformylglycinamidine Synthase; Serine Rich Protein; Glycoside Hydrolase Family; Beta Glucanase; Beta-1 3-Glucanase; Lipoprotein
Number of amino acids: Translated: 292; Mature: 291
Protein sequence:
>292_residues MTPQNPSARFFPTFLALVALMLSLCVAPAWAAEKSAKRGIAYDIALPADLSALSAGVSWWYNWSPRPHDRLASYDYASMY GVDFIPMVWNGNVDDGQLKQYLLAHSAIRYLLVINEPNLLDQANMTPEAAAGFWPRLEQIAAQTGVKLVGPAMNWGTMPG YGDPVVWLDAFYTAYRSMNQNRDPRIDYLAFHWYDYGLPGMLDRLSKYGKPFWVTEFANWHAPDDGAQIDSVDKQKRQMA EMVATLEQRQDVFRYAWFTGRMNPDPHFSSLLDAEGKLTEMGQYYLSLPHSE
Sequences:
>Translated_292_residues MTPQNPSARFFPTFLALVALMLSLCVAPAWAAEKSAKRGIAYDIALPADLSALSAGVSWWYNWSPRPHDRLASYDYASMY GVDFIPMVWNGNVDDGQLKQYLLAHSAIRYLLVINEPNLLDQANMTPEAAAGFWPRLEQIAAQTGVKLVGPAMNWGTMPG YGDPVVWLDAFYTAYRSMNQNRDPRIDYLAFHWYDYGLPGMLDRLSKYGKPFWVTEFANWHAPDDGAQIDSVDKQKRQMA EMVATLEQRQDVFRYAWFTGRMNPDPHFSSLLDAEGKLTEMGQYYLSLPHSE >Mature_291_residues TPQNPSARFFPTFLALVALMLSLCVAPAWAAEKSAKRGIAYDIALPADLSALSAGVSWWYNWSPRPHDRLASYDYASMYG VDFIPMVWNGNVDDGQLKQYLLAHSAIRYLLVINEPNLLDQANMTPEAAAGFWPRLEQIAAQTGVKLVGPAMNWGTMPGY GDPVVWLDAFYTAYRSMNQNRDPRIDYLAFHWYDYGLPGMLDRLSKYGKPFWVTEFANWHAPDDGAQIDSVDKQKRQMAE MVATLEQRQDVFRYAWFTGRMNPDPHFSSLLDAEGKLTEMGQYYLSLPHSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33156; Mature: 33025
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPQNPSARFFPTFLALVALMLSLCVAPAWAAEKSAKRGIAYDIALPADLSALSAGVSWW CCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEECCCCHHHHHHCHHEE YNWSPRPHDRLASYDYASMYGVDFIPMVWNGNVDDGQLKQYLLAHSAIRYLLVINEPNLL ECCCCCCHHHHHCCCHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHEEEEECCCCCC DQANMTPEAAAGFWPRLEQIAAQTGVKLVGPAMNWGTMPGYGDPVVWLDAFYTAYRSMNQ CCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC NRDPRIDYLAFHWYDYGLPGMLDRLSKYGKPFWVTEFANWHAPDDGAQIDSVDKQKRQMA CCCCCEEEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHH EMVATLEQRQDVFRYAWFTGRMNPDPHFSSLLDAEGKLTEMGQYYLSLPHSE HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHEECCCCC >Mature Secondary Structure TPQNPSARFFPTFLALVALMLSLCVAPAWAAEKSAKRGIAYDIALPADLSALSAGVSWW CCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEECCCCHHHHHHCHHEE YNWSPRPHDRLASYDYASMYGVDFIPMVWNGNVDDGQLKQYLLAHSAIRYLLVINEPNLL ECCCCCCHHHHHCCCHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHEEEEECCCCCC DQANMTPEAAAGFWPRLEQIAAQTGVKLVGPAMNWGTMPGYGDPVVWLDAFYTAYRSMNQ CCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC NRDPRIDYLAFHWYDYGLPGMLDRLSKYGKPFWVTEFANWHAPDDGAQIDSVDKQKRQMA CCCCCEEEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHH EMVATLEQRQDVFRYAWFTGRMNPDPHFSSLLDAEGKLTEMGQYYLSLPHSE HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA