Click here to switch to the map view.

The map label for this gene is yebC [C]

Identifier: 66046259

GI number: 66046259

Start: 3626021

End: 3626725

Strand: Reverse

Name: yebC [C]

Synonym: Psyr_3028

Alternate gene names: 66046259

Gene position: 3626725-3626021 (Counterclockwise)

Preceding gene: 66046261

Following gene: 66046256

Centisome position: 59.52

GC content: 61.99

Gene sequence:

>705_bases
ATGGGCGCACAGTGGAAGGTCAAGCATAAAGAAGCGGCAGCCAATGCCAAGGGACGTACGTTTGGCAAGCTGTCCAAGGA
GATCATGATCGCAGCCCGCGCTGGCGCAGACCCGGACATGAACTCGCGTCTGCGGCTGGTGGTCGAGCAGGCCAAGAAGG
CCTCGATGCCGCGCGAGACCCTGGAGCGTGCCATCAAGAAGGGCGCAGGCCTGCTGGGTGAGAGCGTCAACTTCGAGCGT
CTGACCTACGAAGGTTTTGCGCCACACCGCGTGCCGGTGATCGTCGAGTGCCTGACCGACAACATCAATCGGACGGTCTC
GGAAATTCGCGTGCTGTTCCGCAAGGGCCAGTTGGGGGCTGCGGGTTCGGTTTCGTGGGACTTTTTGTATCAGGGCATGA
TCGAAGCTGTTCCTGCAGCAGCGGATGCCGACCCGGAGCTGGCGGCAATCGAGGCCGGCGCTCAGGATTTCGAGCCAGGT
GAAGAGGGCGCGACGCTGTTCCTCACCGAATCCACCGACATGGACGCGGTCTGCAAGGCGCTCCCGGAGTTCGGTTTCAC
CGTCCAGTCCGCGCAACTGGGCTATCGCCCGAAGAGCACCGTGGACGGCCTGACCGATGAGCAGATGGCCGAAGTCGAAG
CGTTTCTCGAAGCCATCGACAACCACGATGACGTGCAGAACGTTTACGTGGGCCTGGCAGGCTGA

Upstream 100 bases:

>100_bases
GTATTTGCCGGTGACCCTTTTTCAGCGCCTTGCCAGCGCCGCGTTCTGTGAGTCATGCAGGCGCAGGCGGCGAGGTGCCT
AGCGAATCAAGAGAGCAGAC

Downstream 100 bases:

>100_bases
TCACTGCGCAATGGAGCGCTTTACGCGCTCCATGTTTTGATCTGTAGAAGAACCTCTGCCAGCGACGGTCGTTGCTGGCA
ATCAGGCTGCACGCATCTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 233

Protein sequence:

>234_residues
MGAQWKVKHKEAAANAKGRTFGKLSKEIMIAARAGADPDMNSRLRLVVEQAKKASMPRETLERAIKKGAGLLGESVNFER
LTYEGFAPHRVPVIVECLTDNINRTVSEIRVLFRKGQLGAAGSVSWDFLYQGMIEAVPAAADADPELAAIEAGAQDFEPG
EEGATLFLTESTDMDAVCKALPEFGFTVQSAQLGYRPKSTVDGLTDEQMAEVEAFLEAIDNHDDVQNVYVGLAG

Sequences:

>Translated_234_residues
MGAQWKVKHKEAAANAKGRTFGKLSKEIMIAARAGADPDMNSRLRLVVEQAKKASMPRETLERAIKKGAGLLGESVNFER
LTYEGFAPHRVPVIVECLTDNINRTVSEIRVLFRKGQLGAAGSVSWDFLYQGMIEAVPAAADADPELAAIEAGAQDFEPG
EEGATLFLTESTDMDAVCKALPEFGFTVQSAQLGYRPKSTVDGLTDEQMAEVEAFLEAIDNHDDVQNVYVGLAG
>Mature_233_residues
GAQWKVKHKEAAANAKGRTFGKLSKEIMIAARAGADPDMNSRLRLVVEQAKKASMPRETLERAIKKGAGLLGESVNFERL
TYEGFAPHRVPVIVECLTDNINRTVSEIRVLFRKGQLGAAGSVSWDFLYQGMIEAVPAAADADPELAAIEAGAQDFEPGE
EGATLFLTESTDMDAVCKALPEFGFTVQSAQLGYRPKSTVDGLTDEQMAEVEAFLEAIDNHDDVQNVYVGLAG

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family [H]

Homologues:

Organism=Homo sapiens, GI27545315, Length=240, Percent_Identity=27.9166666666667, Blast_Score=78, Evalue=6e-15,
Organism=Escherichia coli, GI1788171, Length=232, Percent_Identity=37.5, Blast_Score=137, Evalue=5e-34,
Organism=Escherichia coli, GI1788294, Length=244, Percent_Identity=35.2459016393443, Blast_Score=122, Evalue=2e-29,
Organism=Saccharomyces cerevisiae, GI6321458, Length=257, Percent_Identity=28.0155642023346, Blast_Score=88, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002876
- InterPro:   IPR017856 [H]

Pfam domain/function: PF01709 DUF28 [H]

EC number: NA

Molecular weight: Translated: 25292; Mature: 25161

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAQWKVKHKEAAANAKGRTFGKLSKEIMIAARAGADPDMNSRLRLVVEQAKKASMPRET
CCCCCCCHHHHHHCCCCCCHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHCCCCHHH
LERAIKKGAGLLGESVNFERLTYEGFAPHRVPVIVECLTDNINRTVSEIRVLFRKGQLGA
HHHHHHHCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
AGSVSWDFLYQGMIEAVPAAADADPELAAIEAGAQDFEPGEEGATLFLTESTDMDAVCKA
CCCCHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHH
LPEFGFTVQSAQLGYRPKSTVDGLTDEQMAEVEAFLEAIDNHDDVQNVYVGLAG
HHHHCCEEEHHHCCCCCCCHHCCCCHHHHHHHHHHHHHHCCCCCHHHEEEEECC
>Mature Secondary Structure 
GAQWKVKHKEAAANAKGRTFGKLSKEIMIAARAGADPDMNSRLRLVVEQAKKASMPRET
CCCCCCHHHHHHCCCCCCHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHCCCCHHH
LERAIKKGAGLLGESVNFERLTYEGFAPHRVPVIVECLTDNINRTVSEIRVLFRKGQLGA
HHHHHHHCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
AGSVSWDFLYQGMIEAVPAAADADPELAAIEAGAQDFEPGEEGATLFLTESTDMDAVCKA
CCCCHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHH
LPEFGFTVQSAQLGYRPKSTVDGLTDEQMAEVEAFLEAIDNHDDVQNVYVGLAG
HHHHCCEEEHHHCCCCCCCHHCCCCHHHHHHHHHHHHHHCCCCCHHHEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA