| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is pspF [C]
Identifier: 66046245
GI number: 66046245
Start: 3607504
End: 3608538
Strand: Reverse
Name: pspF [C]
Synonym: Psyr_3014
Alternate gene names: 66046245
Gene position: 3608538-3607504 (Counterclockwise)
Preceding gene: 66046246
Following gene: 66046244
Centisome position: 59.22
GC content: 65.22
Gene sequence:
>1035_bases ATGACCGTGTCTGATTCAACGATGAGCGAAACTCCGCATTTCCCACTGGCTGCTGTGGTCGGTGCCGATGACTTGAAACT GGCGTTATGCCTGACTGCCATTGACCCGCGCATCGGCGGCGTGTTGATCGAAGGGCCACGGGGCATGGCCAAATCGACGC TGGCCCGCGGGCTGGCCGATGTGCTGGCCAGCGGTCAGTTCGTCACCTTGCCGCTGGGCGCTACCGAAGAGCGTCTGGTC GGCACGCTGGACCTTGACGCCGCGCTGAGCGAAGGCCGCGCGCGCTTCTCTCCGGGCGTGCTGGCCAAGGCCGACGGTGG CGTGCTGTATGTCGATGAGGTCAACCTGCTTGCCGACCATCTGGTCGACCTGCTGCTGGACGTCGCGGCCAGCGGCGTCA ACCTGGTCGAGCGCGACGGTATCTCCCATCGTCATGCTGCGCGTTTCGTGCTGATCGGCACCATGAACCCCGAAGAGGGC GAACTGCGCCCGCAGTTGCTGGATCGCTTTGGCCTCAATGTGGCCCTGAGCGGCCATACGCTGCCTGCCGAGCGCAGTCA GATCATCCGTCGCCGTCTGGATTTCGACAGCGATCCGCAGGGCTTCTGCCAGCACTGGCAAACGCAGCAGGATGCCTTGA AGCAGCGCTGTGAACAGGCACGTCAGTTGCTGTCGGGCATTGAACTGGATGACCAGTCCCTGGCAATGATCACCGAGCGC TGCTTTGCCGCAGGTGTCGACGGCATGCGCGCCGATCTGGTCTGGCTGCGGGCTGCGCGCGCGCATGCGGCGTGGCGGGG GGCCGGGCACATTGAAGAGCAGGACATCGAGGCGGTTGCCGAATTTGCCTTGCGTCATCGGCGTCGCGAGCCCTTACCGC CGCCGCAAAACTCCGAGGCGCCGCCACCGCCACCGGGCTCGTCCAGCAAACAGGCCGAGCCTGAAAGCGGGCAGGGCAAC TGGGGTGAGTTGCCCGCTCAGGCCGTCACGACCGGATCACGCCGCGAAGTGCCGAGCTGGCCAAAAAAGCCCTAG
Upstream 100 bases:
>100_bases CCGAGCGCATGCTCGAAGCCCAGCAGCGCGGCCTCTGGCAGGAGCCTGGCGAGTATCAGCAGGCGCTGGAAGACCTGCTC CTGGACATAGAAGAGAACTG
Downstream 100 bases:
>100_bases GCATCCGCCCCCGCGCCATACAGGGGGCGGATGCCATTCCCCGTCCCGGTCGACTGGCCAGCGGCAGGCAGGGCGCTGTG CGTGTCGGAGCTGACGGCCC
Product: magnesium chelatase, ChlI subunit
Products: ADP; phosphate; Mg-protoporphyrin IX; H+
Alternate protein names: NA
Number of amino acids: Translated: 344; Mature: 343
Protein sequence:
>344_residues MTVSDSTMSETPHFPLAAVVGADDLKLALCLTAIDPRIGGVLIEGPRGMAKSTLARGLADVLASGQFVTLPLGATEERLV GTLDLDAALSEGRARFSPGVLAKADGGVLYVDEVNLLADHLVDLLLDVAASGVNLVERDGISHRHAARFVLIGTMNPEEG ELRPQLLDRFGLNVALSGHTLPAERSQIIRRRLDFDSDPQGFCQHWQTQQDALKQRCEQARQLLSGIELDDQSLAMITER CFAAGVDGMRADLVWLRAARAHAAWRGAGHIEEQDIEAVAEFALRHRRREPLPPPQNSEAPPPPPGSSSKQAEPESGQGN WGELPAQAVTTGSRREVPSWPKKP
Sequences:
>Translated_344_residues MTVSDSTMSETPHFPLAAVVGADDLKLALCLTAIDPRIGGVLIEGPRGMAKSTLARGLADVLASGQFVTLPLGATEERLV GTLDLDAALSEGRARFSPGVLAKADGGVLYVDEVNLLADHLVDLLLDVAASGVNLVERDGISHRHAARFVLIGTMNPEEG ELRPQLLDRFGLNVALSGHTLPAERSQIIRRRLDFDSDPQGFCQHWQTQQDALKQRCEQARQLLSGIELDDQSLAMITER CFAAGVDGMRADLVWLRAARAHAAWRGAGHIEEQDIEAVAEFALRHRRREPLPPPQNSEAPPPPPGSSSKQAEPESGQGN WGELPAQAVTTGSRREVPSWPKKP >Mature_343_residues TVSDSTMSETPHFPLAAVVGADDLKLALCLTAIDPRIGGVLIEGPRGMAKSTLARGLADVLASGQFVTLPLGATEERLVG TLDLDAALSEGRARFSPGVLAKADGGVLYVDEVNLLADHLVDLLLDVAASGVNLVERDGISHRHAARFVLIGTMNPEEGE LRPQLLDRFGLNVALSGHTLPAERSQIIRRRLDFDSDPQGFCQHWQTQQDALKQRCEQARQLLSGIELDDQSLAMITERC FAAGVDGMRADLVWLRAARAHAAWRGAGHIEEQDIEAVAEFALRHRRREPLPPPQNSEAPPPPPGSSSKQAEPESGQGNW GELPAQAVTTGSRREVPSWPKKP
Specific function: Transcriptional Activator For The Phage Shock Protein (Psp) Operon (Pspabce). [C]
COG id: COG1239
COG function: function code H; Mg-chelatase subunit ChlI
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Mg-chelatase subunits D/I family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR000523 [H]
Pfam domain/function: PF01078 Mg_chelatase [H]
EC number: 6.6.1.1
Molecular weight: Translated: 37129; Mature: 36998
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVSDSTMSETPHFPLAAVVGADDLKLALCLTAIDPRIGGVLIEGPRGMAKSTLARGLAD CCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHH VLASGQFVTLPLGATEERLVGTLDLDAALSEGRARFSPGVLAKADGGVLYVDEVNLLADH HHHCCCEEEEECCCCHHHHEEEECHHHHHHCCCHHCCCCEEEECCCCEEEEECHHHHHHH LVDLLLDVAASGVNLVERDGISHRHAARFVLIGTMNPEEGELRPQLLDRFGLNVALSGHT HHHHHHHHHHCCCCHHHHCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHCCEEEECCCC LPAERSQIIRRRLDFDSDPQGFCQHWQTQQDALKQRCEQARQLLSGIELDDQSLAMITER CCHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH CFAAGVDGMRADLVWLRAARAHAAWRGAGHIEEQDIEAVAEFALRHRRREPLPPPQNSEA HHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC PPPPPGSSSKQAEPESGQGNWGELPAQAVTTGSRREVPSWPKKP CCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure TVSDSTMSETPHFPLAAVVGADDLKLALCLTAIDPRIGGVLIEGPRGMAKSTLARGLAD CCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHH VLASGQFVTLPLGATEERLVGTLDLDAALSEGRARFSPGVLAKADGGVLYVDEVNLLADH HHHCCCEEEEECCCCHHHHEEEECHHHHHHCCCHHCCCCEEEECCCCEEEEECHHHHHHH LVDLLLDVAASGVNLVERDGISHRHAARFVLIGTMNPEEGELRPQLLDRFGLNVALSGHT HHHHHHHHHHCCCCHHHHCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHCCEEEECCCC LPAERSQIIRRRLDFDSDPQGFCQHWQTQQDALKQRCEQARQLLSGIELDDQSLAMITER CCHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH CFAAGVDGMRADLVWLRAARAHAAWRGAGHIEEQDIEAVAEFALRHRRREPLPPPQNSEA HHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC PPPPPGSSSKQAEPESGQGNWGELPAQAVTTGSRREVPSWPKKP CCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; protoporphyrin IX; Mg2+; H2O
Specific reaction: ATP + protoporphyrin IX + Mg2+ + H2O = ADP + phosphate + Mg-protoporphyrin IX + 2 H+
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]