| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66046233
Identifier: 66046233
GI number: 66046233
Start: 3597756
End: 3598796
Strand: Reverse
Name: 66046233
Synonym: Psyr_3002
Alternate gene names: NA
Gene position: 3598796-3597756 (Counterclockwise)
Preceding gene: 66046234
Following gene: 66046222
Centisome position: 59.06
GC content: 61.86
Gene sequence:
>1041_bases ATGGTACGTCTTTGTGCAGTGATGCTGGTTTTCCTGCTCGATAGCCTTGTTTCGGTGCACGCTCAGGCGGATGAGTCCTG GAGCGCGGGCTATCACCAGTTGAGTTTCCCTGATCCGCTGGATTCTCAGCCGGTCGAGGCTATCGCCTTTTACCCGTCGA CCGCGGCCGAGCAAGTGAGCATGCTTCATGGTTACCGTGTCGAGGCCGGTGAAGAAGCGCCTATTGCAATGGGCCGTTTC CCCTTGTTGTTGCTGTCGCACGGCAACACCGGTACCCCGCTGGCGCTGCATGACCTGGCCACTTCGCTGGCCCGCCAGGG GTTTGTGGTGGTTGCCGTGGTCCATCCTGGCGACAATGATCGCGATCACAGCCGTCTCGGCAGCCTGAGTAACCTGTACG GGCGACCGCTGCAGATTTCCGAAGCGATCAGCACGGCCTTGCTCGACCCCTTGCTGGCCCCCTATCTAAATGCCCGGCAA GTGGGCGTGATCGGTTATTCGGCCGGTGGCGAAACCGCGCTGATTCTCGCCGGCGCACAACCTGATCTGCAGCGTCTGCG TCAGTACTGCGCCGAGCGCCCGACAGACCGTGATGCGTGCAAGACGCAGGGCGAACTGGTCGCGGACCGTGATGACCTTC ACGCTCAGGCGGATCCGCGGGTCGGCGCATTGATGTTGATGGCCCCGTTGAGCCTGATGTTCGGCCGTCACACGCTGGGT GATGTGCACGTGCCGGTGCTGATGTACGCGGGGGATGACGATCAGTTGCTGGCGATCGACCGAAACGCAGAGGCGCTGGC GCGCAAGCTGCCGCAGCCACCCGACTACAAGTTACTGGCCGGGGCAGGGCACTTTGTCTTCATGGCACCGTGCAGTGATG AGCAGCGCGCGAGTGCGCCATTGCTGTGCAATGACCCTGACGGCGTGGACCGCGAGGATATTCACCGTAACCTGAGTGCC GAAGCGGTGCGCTTCTTCAGTGCGGCGCTCAATTCCGCAGACGATGACCGTTCAGGCATGCAGACGGCGCATCATCAGTA A
Upstream 100 bases:
>100_bases ATATCTGGGTGGGAACGGCGCGCTGGAGCATGATGCTCGACACAAGCGCTTGATGGATTGTCTGGACGAAGTTCCGGATT TGCAAAGGTTGGGCCTTGCC
Downstream 100 bases:
>100_bases ACACGCCGTTCAGGCATTCAGCGAACTCAGAAAATCGCCGAACCCGCCCCTGGCTTTCGAGTCGAGGCGGGTGCTGGTTG TGACCTTCGGGCGGCAGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MVRLCAVMLVFLLDSLVSVHAQADESWSAGYHQLSFPDPLDSQPVEAIAFYPSTAAEQVSMLHGYRVEAGEEAPIAMGRF PLLLLSHGNTGTPLALHDLATSLARQGFVVVAVVHPGDNDRDHSRLGSLSNLYGRPLQISEAISTALLDPLLAPYLNARQ VGVIGYSAGGETALILAGAQPDLQRLRQYCAERPTDRDACKTQGELVADRDDLHAQADPRVGALMLMAPLSLMFGRHTLG DVHVPVLMYAGDDDQLLAIDRNAEALARKLPQPPDYKLLAGAGHFVFMAPCSDEQRASAPLLCNDPDGVDREDIHRNLSA EAVRFFSAALNSADDDRSGMQTAHHQ
Sequences:
>Translated_346_residues MVRLCAVMLVFLLDSLVSVHAQADESWSAGYHQLSFPDPLDSQPVEAIAFYPSTAAEQVSMLHGYRVEAGEEAPIAMGRF PLLLLSHGNTGTPLALHDLATSLARQGFVVVAVVHPGDNDRDHSRLGSLSNLYGRPLQISEAISTALLDPLLAPYLNARQ VGVIGYSAGGETALILAGAQPDLQRLRQYCAERPTDRDACKTQGELVADRDDLHAQADPRVGALMLMAPLSLMFGRHTLG DVHVPVLMYAGDDDQLLAIDRNAEALARKLPQPPDYKLLAGAGHFVFMAPCSDEQRASAPLLCNDPDGVDREDIHRNLSA EAVRFFSAALNSADDDRSGMQTAHHQ >Mature_346_residues MVRLCAVMLVFLLDSLVSVHAQADESWSAGYHQLSFPDPLDSQPVEAIAFYPSTAAEQVSMLHGYRVEAGEEAPIAMGRF PLLLLSHGNTGTPLALHDLATSLARQGFVVVAVVHPGDNDRDHSRLGSLSNLYGRPLQISEAISTALLDPLLAPYLNARQ VGVIGYSAGGETALILAGAQPDLQRLRQYCAERPTDRDACKTQGELVADRDDLHAQADPRVGALMLMAPLSLMFGRHTLG DVHVPVLMYAGDDDQLLAIDRNAEALARKLPQPPDYKLLAGAGHFVFMAPCSDEQRASAPLLCNDPDGVDREDIHRNLSA EAVRFFSAALNSADDDRSGMQTAHHQ
Specific function: Unknown
COG id: COG4188
COG function: function code R; Predicted dienelactone hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37358; Mature: 37358
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRLCAVMLVFLLDSLVSVHAQADESWSAGYHQLSFPDPLDSQPVEAIAFYPSTAAEQVS CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCEEEEECCCHHHHHHH MLHGYRVEAGEEAPIAMGRFPLLLLSHGNTGTPLALHDLATSLARQGFVVVAVVHPGDND HHHCEECCCCCCCCEEECCCEEEEEECCCCCCCCHHHHHHHHHHHCCEEEEEEECCCCCC RDHSRLGSLSNLYGRPLQISEAISTALLDPLLAPYLNARQVGVIGYSAGGETALILAGAQ CHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEECCC PDLQRLRQYCAERPTDRDACKTQGELVADRDDLHAQADPRVGALMLMAPLSLMFGRHTLG HHHHHHHHHHHCCCCCHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC DVHVPVLMYAGDDDQLLAIDRNAEALARKLPQPPDYKLLAGAGHFVFMAPCSDEQRASAP CEEEEEEEEECCCCCEEEEECCHHHHHHHCCCCCCCEEEECCCCEEEEECCCCCHHCCCC LLCNDPDGVDREDIHRNLSAEAVRFFSAALNSADDDRSGMQTAHHQ EEECCCCCCCHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHCCCC >Mature Secondary Structure MVRLCAVMLVFLLDSLVSVHAQADESWSAGYHQLSFPDPLDSQPVEAIAFYPSTAAEQVS CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCEEEEECCCHHHHHHH MLHGYRVEAGEEAPIAMGRFPLLLLSHGNTGTPLALHDLATSLARQGFVVVAVVHPGDND HHHCEECCCCCCCCEEECCCEEEEEECCCCCCCCHHHHHHHHHHHCCEEEEEEECCCCCC RDHSRLGSLSNLYGRPLQISEAISTALLDPLLAPYLNARQVGVIGYSAGGETALILAGAQ CHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEECCC PDLQRLRQYCAERPTDRDACKTQGELVADRDDLHAQADPRVGALMLMAPLSLMFGRHTLG HHHHHHHHHHHCCCCCHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC DVHVPVLMYAGDDDQLLAIDRNAEALARKLPQPPDYKLLAGAGHFVFMAPCSDEQRASAP CEEEEEEEEECCCCCEEEEECCHHHHHHHCCCCCCCEEEECCCCEEEEECCCCCHHCCCC LLCNDPDGVDREDIHRNLSAEAVRFFSAALNSADDDRSGMQTAHHQ EEECCCCCCCHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA