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The map label for this gene is 66046230

Identifier: 66046230

GI number: 66046230

Start: 3595728

End: 3596501

Strand: Direct

Name: 66046230

Synonym: Psyr_2999

Alternate gene names: NA

Gene position: 3595728-3596501 (Clockwise)

Preceding gene: 66046229

Following gene: 66046231

Centisome position: 59.01

GC content: 62.66

Gene sequence:

>774_bases
ATGAGCGAAGGGTTCGTAGTGAGTGATGACGAGTCCGGCCAGGGTACTTCCCTCGCCGCCTGGAATGCTTCGACCAGGCT
GCACGGCCTGCCTGTGATCACCGCAGACCTGCTGGTGCCGACCAATTGCCGAGCCGTGATCATCGCCCCGCACCCGGATG
ATGAAGTACTGGCCTGTGGCGGTCTGATGAGCCAGCTGGCACAACTGGAACGCAATCTGTTACTGATCTCGGTCACCGAT
GGTACAGCCAGCCATCCGGGCTCCGCGCTCTGGCCCGTCGATCGTCTGTGCAAAGCCCGACCTGAGGAAAGTGCCGAAGC
CTTGAGTCGCCTCGGCATACCTGCCGAGCGCCTTGAGTGGTTGCGTGGTGGCCTTCAGGACGGCGCCGTGGCCGCAGCGG
AAGATCAGCTGGTGACTTTTCTTGAACAGCATCTGGGCCCTGCCGACGTGGTGTTCGCCACCTGGGCAGAAGATGGCCAC
AGCGACCATGAAGCGGTCGGCAGAGCCAGTGCCAAGGCCTGCGCGTCAACCGGAGCACAGTTCCACGAAGTGCCGGTCTG
GGCCTGGCACTGGGCTGACCCTGAAGACCAGCGTCTGCCGTGGGACAGAGCGCGCAAGCTGCTGCTCGATCCGGTGACGC
TGGCCCATAAACGCAATGCCGCCCAGGCGTTCACCAGTCAGTTGCAGGGTGATCCGGCCATCGGTCTTTCCCCGGTTTTG
CCGGACACAGTGCTGGAAAGGCTGCTGCAGCCCTTTGAAGTGGTGTTCACATGA

Upstream 100 bases:

>100_bases
CGTCAGAGCCACGCCGAACAGGACCTGGCGGCATTGGGCCAGTTGGCCGGCAAGGCGTTGCCCGCTGCACGGACGTGGTC
ACTATGAGAGCGTATGGAAC

Downstream 100 bases:

>100_bases
GCGTCGAGGACAGTTATTTCAATGAGCTGTTTCTCAACAACGATGACCCGTGGGCATTCAAGCAACGCTGGTATGAACGG
CGCAAGCGCGCCCTGACCCT

Product: LmbE-like protein

Products: NA

Alternate protein names: LmbE-Like Protein; LmbE Protein; Gpi Deacetylase; GlcNAc-PI De-N-Acetylase Family Protein; Acyl-CoA Dehydrogenase/Methyltransferase; N-Acetylglucosaminylphosphatidylinositol Deacetylase; GlcNAc-PI De-N-Acetylase

Number of amino acids: Translated: 257; Mature: 256

Protein sequence:

>257_residues
MSEGFVVSDDESGQGTSLAAWNASTRLHGLPVITADLLVPTNCRAVIIAPHPDDEVLACGGLMSQLAQLERNLLLISVTD
GTASHPGSALWPVDRLCKARPEESAEALSRLGIPAERLEWLRGGLQDGAVAAAEDQLVTFLEQHLGPADVVFATWAEDGH
SDHEAVGRASAKACASTGAQFHEVPVWAWHWADPEDQRLPWDRARKLLLDPVTLAHKRNAAQAFTSQLQGDPAIGLSPVL
PDTVLERLLQPFEVVFT

Sequences:

>Translated_257_residues
MSEGFVVSDDESGQGTSLAAWNASTRLHGLPVITADLLVPTNCRAVIIAPHPDDEVLACGGLMSQLAQLERNLLLISVTD
GTASHPGSALWPVDRLCKARPEESAEALSRLGIPAERLEWLRGGLQDGAVAAAEDQLVTFLEQHLGPADVVFATWAEDGH
SDHEAVGRASAKACASTGAQFHEVPVWAWHWADPEDQRLPWDRARKLLLDPVTLAHKRNAAQAFTSQLQGDPAIGLSPVL
PDTVLERLLQPFEVVFT
>Mature_256_residues
SEGFVVSDDESGQGTSLAAWNASTRLHGLPVITADLLVPTNCRAVIIAPHPDDEVLACGGLMSQLAQLERNLLLISVTDG
TASHPGSALWPVDRLCKARPEESAEALSRLGIPAERLEWLRGGLQDGAVAAAEDQLVTFLEQHLGPADVVFATWAEDGHS
DHEAVGRASAKACASTGAQFHEVPVWAWHWADPEDQRLPWDRARKLLLDPVTLAHKRNAAQAFTSQLQGDPAIGLSPVLP
DTVLERLLQPFEVVFT

Specific function: Unknown

COG id: COG2120

COG function: function code S; Uncharacterized proteins, LmbE homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27676; Mature: 27545

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEGFVVSDDESGQGTSLAAWNASTRLHGLPVITADLLVPTNCRAVIIAPHPDDEVLACG
CCCCCEEECCCCCCCCEEEEECCCCCCCCCCEEEEEEEECCCCCEEEECCCCCCCHHHHH
GLMSQLAQLERNLLLISVTDGTASHPGSALWPVDRLCKARPEESAEALSRLGIPAERLEW
HHHHHHHHHHCCEEEEEECCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHCCCCHHHHHH
LRGGLQDGAVAAAEDQLVTFLEQHLGPADVVFATWAEDGHSDHEAVGRASAKACASTGAQ
HHCCCCCCCEEHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCC
FHEVPVWAWHWADPEDQRLPWDRARKLLLDPVTLAHKRNAAQAFTSQLQGDPAIGLSPVL
CCCCCEEEEECCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDTVLERLLQPFEVVFT
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SEGFVVSDDESGQGTSLAAWNASTRLHGLPVITADLLVPTNCRAVIIAPHPDDEVLACG
CCCCEEECCCCCCCCEEEEECCCCCCCCCCEEEEEEEECCCCCEEEECCCCCCCHHHHH
GLMSQLAQLERNLLLISVTDGTASHPGSALWPVDRLCKARPEESAEALSRLGIPAERLEW
HHHHHHHHHHCCEEEEEECCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHCCCCHHHHHH
LRGGLQDGAVAAAEDQLVTFLEQHLGPADVVFATWAEDGHSDHEAVGRASAKACASTGAQ
HHCCCCCCCEEHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCC
FHEVPVWAWHWADPEDQRLPWDRARKLLLDPVTLAHKRNAAQAFTSQLQGDPAIGLSPVL
CCCCCEEEEECCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDTVLERLLQPFEVVFT
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA