| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66046203
Identifier: 66046203
GI number: 66046203
Start: 3564783
End: 3565340
Strand: Reverse
Name: 66046203
Synonym: Psyr_2972
Alternate gene names: NA
Gene position: 3565340-3564783 (Counterclockwise)
Preceding gene: 66046205
Following gene: 66046197
Centisome position: 58.51
GC content: 61.65
Gene sequence:
>558_bases ATGATCCTTTCGCACTACCGACGCTCCGTGCCAAGCCTGTGCCTGTTCCTGCTGCTGGGCACTGCCCAGGTCCATGCCGC CGATGCGATGATCGTCTGGCCCGCAGGCTGGGAGGTCGAGTCGTTACCGACCGAGTCGGGCGAGCCCGTTCAACCTTCCG TGCAGGTCAGACAGCGCGCGGTTAAAAACGATCAAAGTGGAAACCCGCTGATGGTCATGGAGCTCACCCAGACGCGCCTG ACGCCGGGGCATGAAGTCAACGTCCAGGGCGTTCTGCTGGAAATGCGCAAGTCGGTTCAGGTCAATTTTGCCCGCAGCGG ATTGCAGAGCGCCTGCACGCATGTCCGCGAAAGCCGGCTCAGCGTGGTGCCCGCGCTCGAAACCACCTGCACCATTACCC AGAACGGTGTGCACGTGCTGACCCAGACACTGGTCGCGGCCGCCAGCAAGGATCTGGCCTGGTCGTTGTCTTATGCGGGA TCGGCAGACGGCTATGCGAGCAACAAGGATGAGGCACTGCGTATTCGCGAGAGTCTGCGTCTGGACATTAGGCAGTGA
Upstream 100 bases:
>100_bases GCGAGCAGTGCCAAACCCGGCTTGGATAACGTCGCGTCGGCCTTGCTCGATGCCGACAACAGGCTCAGAATTTCCGGTCA ACCGTTCTGGCGACCCGATC
Downstream 100 bases:
>100_bases CATCTGCCTTTTCGCAGGCAAAAAGAAGCCCGCCGAGGCGGGCATGGGGCGCTATTCCTTTAGCGGTCTTCATCATCCGA GAGTCCATGTGAAAAAAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 185; Mature: 185
Protein sequence:
>185_residues MILSHYRRSVPSLCLFLLLGTAQVHAADAMIVWPAGWEVESLPTESGEPVQPSVQVRQRAVKNDQSGNPLMVMELTQTRL TPGHEVNVQGVLLEMRKSVQVNFARSGLQSACTHVRESRLSVVPALETTCTITQNGVHVLTQTLVAAASKDLAWSLSYAG SADGYASNKDEALRIRESLRLDIRQ
Sequences:
>Translated_185_residues MILSHYRRSVPSLCLFLLLGTAQVHAADAMIVWPAGWEVESLPTESGEPVQPSVQVRQRAVKNDQSGNPLMVMELTQTRL TPGHEVNVQGVLLEMRKSVQVNFARSGLQSACTHVRESRLSVVPALETTCTITQNGVHVLTQTLVAAASKDLAWSLSYAG SADGYASNKDEALRIRESLRLDIRQ >Mature_185_residues MILSHYRRSVPSLCLFLLLGTAQVHAADAMIVWPAGWEVESLPTESGEPVQPSVQVRQRAVKNDQSGNPLMVMELTQTRL TPGHEVNVQGVLLEMRKSVQVNFARSGLQSACTHVRESRLSVVPALETTCTITQNGVHVLTQTLVAAASKDLAWSLSYAG SADGYASNKDEALRIRESLRLDIRQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20262; Mature: 20262
Theoretical pI: Translated: 7.56; Mature: 7.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILSHYRRSVPSLCLFLLLGTAQVHAADAMIVWPAGWEVESLPTESGEPVQPSVQVRQRA CCCHHHHHHHHHHHHHHHHCCCCEEECCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHH VKNDQSGNPLMVMELTQTRLTPGHEVNVQGVLLEMRKSVQVNFARSGLQSACTHVRESRL HHCCCCCCCEEEEEECHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SVVPALETTCTITQNGVHVLTQTLVAAASKDLAWSLSYAGSADGYASNKDEALRIRESLR HCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHH LDIRQ CCCCC >Mature Secondary Structure MILSHYRRSVPSLCLFLLLGTAQVHAADAMIVWPAGWEVESLPTESGEPVQPSVQVRQRA CCCHHHHHHHHHHHHHHHHCCCCEEECCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHH VKNDQSGNPLMVMELTQTRLTPGHEVNVQGVLLEMRKSVQVNFARSGLQSACTHVRESRL HHCCCCCCCEEEEEECHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SVVPALETTCTITQNGVHVLTQTLVAAASKDLAWSLSYAGSADGYASNKDEALRIRESLR HCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHH LDIRQ CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA