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The map label for this gene is dppC [H]

Identifier: 66046191

GI number: 66046191

Start: 3548200

End: 3549132

Strand: Direct

Name: dppC [H]

Synonym: Psyr_2960

Alternate gene names: 66046191

Gene position: 3548200-3549132 (Clockwise)

Preceding gene: 66046190

Following gene: 66046192

Centisome position: 58.23

GC content: 65.59

Gene sequence:

>933_bases
ATGACTATCTTCGACAACCGCCTTGCGCGCCTGGCTCGCCTGGTCGTTTCCAGTGAAACCATTGCGGGTAAAACCGCACC
TGCCCTGCAGTGGCGACGGCGCAGCAGCCTGAGCCGGATCGTGGAAGCGACGCGCCCCCTGTTGCGGCGCCCTGGTTTTC
TGCTGGCCGTGGCAATCGTCGCCTTTGCGCTGCTGGCCGCGCTGGCACCCAACCTGCTGAGCAGCTACGCACCTTATGCC
ACCTCGCCTGCCGACAAGCTCACCGCGCCCAATGCCGCGCACTGGTTCGGCACCGACGAGTTGGGCCGTGATCTTTATAC
CCGCGTGGTGCATGGCTCCAGCCTCTCGGTACAGGCGGCATTGCTGGCTGTCGGCATCGCCATGGCCGGCGGCCTGAGTC
TGGGGGTGATTTCCGGTTTCGCAGGCGGGCGCATCGATGCGGTGATCATGCGCCTGATCGATGTATTGCTGGCCCTGCCC
GGTCTGTTACTGGCGCTGGCGATTGTCACTGCTATCGGTTTCGGCACCCTGCCGGTGGCCATTGCGGTCGGTGTGGGGAT
CATCCCCGGCTTCGCGCGCACCACCCGCGCCGAAGTGCTGCGGGTCAAAACCCTGCCGTACGTCGAAGCCGCGCGTCTGG
GCGGTGCAAGCTGGACGCGAACCCTGCTGCGCCACATCCTGCCGAACGCCTGGGGCCCGGTGGCGGTGTTGGCCACGCTG
GACTTCGGCGCGGCGATTCTGGCCACTGCCGGGCTGAGTTTTCTGGGTTTCGGCGCCGAACCACCGGCCGCCGAATGGGG
CACGCTGATTGCCAACGGTCGTCATTTTCTGATGACTGCACCCTGGGTGTCGCTGTTGCCGGGGCTGTTCGTGGTCGGCG
TGGTGTTCAGCTTCAACCACATCGCCCGCACGCTGGAGGAGACTCAACGATGA

Upstream 100 bases:

>100_bases
GTCTCCGCAGCTGCGTTCGTCGTGGTCAATCTGATCGTTGACCTGCTGTATCCCGCGCTGGATCCGCGCATCGCCCATAC
GCCAAAGGTCTCCTGAAGCC

Downstream 100 bases:

>100_bases
ATGACACCGCTCAACTGATCGACATTCGTCATCTGAGTGTCGCCTACCGCTTCGATGGCCAGATCAACCAGGCCGTGCGC
AACGTATCCTTCCAGGTCGC

Product: binding-protein dependent transport system inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 309

Protein sequence:

>310_residues
MTIFDNRLARLARLVVSSETIAGKTAPALQWRRRSSLSRIVEATRPLLRRPGFLLAVAIVAFALLAALAPNLLSSYAPYA
TSPADKLTAPNAAHWFGTDELGRDLYTRVVHGSSLSVQAALLAVGIAMAGGLSLGVISGFAGGRIDAVIMRLIDVLLALP
GLLLALAIVTAIGFGTLPVAIAVGVGIIPGFARTTRAEVLRVKTLPYVEAARLGGASWTRTLLRHILPNAWGPVAVLATL
DFGAAILATAGLSFLGFGAEPPAAEWGTLIANGRHFLMTAPWVSLLPGLFVVGVVFSFNHIARTLEETQR

Sequences:

>Translated_310_residues
MTIFDNRLARLARLVVSSETIAGKTAPALQWRRRSSLSRIVEATRPLLRRPGFLLAVAIVAFALLAALAPNLLSSYAPYA
TSPADKLTAPNAAHWFGTDELGRDLYTRVVHGSSLSVQAALLAVGIAMAGGLSLGVISGFAGGRIDAVIMRLIDVLLALP
GLLLALAIVTAIGFGTLPVAIAVGVGIIPGFARTTRAEVLRVKTLPYVEAARLGGASWTRTLLRHILPNAWGPVAVLATL
DFGAAILATAGLSFLGFGAEPPAAEWGTLIANGRHFLMTAPWVSLLPGLFVVGVVFSFNHIARTLEETQR
>Mature_309_residues
TIFDNRLARLARLVVSSETIAGKTAPALQWRRRSSLSRIVEATRPLLRRPGFLLAVAIVAFALLAALAPNLLSSYAPYAT
SPADKLTAPNAAHWFGTDELGRDLYTRVVHGSSLSVQAALLAVGIAMAGGLSLGVISGFAGGRIDAVIMRLIDVLLALPG
LLLALAIVTAIGFGTLPVAIAVGVGIIPGFARTTRAEVLRVKTLPYVEAARLGGASWTRTLLRHILPNAWGPVAVLATLD
FGAAILATAGLSFLGFGAEPPAAEWGTLIANGRHFLMTAPWVSLLPGLFVVGVVFSFNHIARTLEETQR

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787760, Length=244, Percent_Identity=41.8032786885246, Blast_Score=184, Evalue=6e-48,
Organism=Escherichia coli, GI1787054, Length=292, Percent_Identity=36.3013698630137, Blast_Score=174, Evalue=7e-45,
Organism=Escherichia coli, GI1789889, Length=232, Percent_Identity=34.051724137931, Blast_Score=140, Evalue=8e-35,
Organism=Escherichia coli, GI1787498, Length=253, Percent_Identity=36.3636363636364, Blast_Score=140, Evalue=9e-35,
Organism=Escherichia coli, GI1789964, Length=251, Percent_Identity=39.4422310756972, Blast_Score=134, Evalue=6e-33,
Organism=Escherichia coli, GI1787549, Length=198, Percent_Identity=34.3434343434343, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI1788505, Length=205, Percent_Identity=32.1951219512195, Blast_Score=88, Evalue=9e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32582; Mature: 32451

Theoretical pI: Translated: 11.59; Mature: 11.59

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIFDNRLARLARLVVSSETIAGKTAPALQWRRRSSLSRIVEATRPLLRRPGFLLAVAIV
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
AFALLAALAPNLLSSYAPYATSPADKLTAPNAAHWFGTDELGRDLYTRVVHGSSLSVQAA
HHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCHHCCCCHHHHHHHHHHHHCCCCHHHHHH
LLAVGIAMAGGLSLGVISGFAGGRIDAVIMRLIDVLLALPGLLLALAIVTAIGFGTLPVA
HHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
IAVGVGIIPGFARTTRAEVLRVKTLPYVEAARLGGASWTRTLLRHILPNAWGPVAVLATL
HHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHH
DFGAAILATAGLSFLGFGAEPPAAEWGTLIANGRHFLMTAPWVSLLPGLFVVGVVFSFNH
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHH
IARTLEETQR
HHHHHHHHCC
>Mature Secondary Structure 
TIFDNRLARLARLVVSSETIAGKTAPALQWRRRSSLSRIVEATRPLLRRPGFLLAVAIV
CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
AFALLAALAPNLLSSYAPYATSPADKLTAPNAAHWFGTDELGRDLYTRVVHGSSLSVQAA
HHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCHHCCCCHHHHHHHHHHHHCCCCHHHHHH
LLAVGIAMAGGLSLGVISGFAGGRIDAVIMRLIDVLLALPGLLLALAIVTAIGFGTLPVA
HHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
IAVGVGIIPGFARTTRAEVLRVKTLPYVEAARLGGASWTRTLLRHILPNAWGPVAVLATL
HHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHH
DFGAAILATAGLSFLGFGAEPPAAEWGTLIANGRHFLMTAPWVSLLPGLFVVGVVFSFNH
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHH
IARTLEETQR
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]