| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is artQ [H]
Identifier: 66046174
GI number: 66046174
Start: 3533870
End: 3534529
Strand: Reverse
Name: artQ [H]
Synonym: Psyr_2943
Alternate gene names: 66046174
Gene position: 3534529-3533870 (Counterclockwise)
Preceding gene: 66046175
Following gene: 66046173
Centisome position: 58.0
GC content: 58.79
Gene sequence:
>660_bases ATGGCCAGTTCGGGTCTTGAGTTGTTGTGGGTGTCTGCGCCGCAGTTGATCACGGGGGCAGGGCGCACATTAGGGATTTC ACTGTTGGCAATTGTCTTCAGCAGTATTGGCGGCGTGGGTTACGGCGTGCTGCGCAGCCTTGGCAAACGCTGGCTGGAGG TGCCGTTGCGGATCTATCTGGAGCTGTTCCGAGCGATTCCGGTACTGGTCTGGCTGTACTTGTTCTTCTTCGGGTTGCCG ATTTTCCTTGGCGTGAGTATTCCAGCGTTCTGGTGCGCAGTGCTGGTGCTTTCTTTGTGGGGGGCCAGCGAGGTCGGTGA GGTGGTGCGCGGCGGGTTGCGTTCGATTCCTCGCGGGCAACGCGAAGCAGGCCTGGCAATCGGTCTTGGTCTCGGCCAGT TGTATGGTCGCGTGCTACTGCCACAGGCACTCAAGCGACTGACGCCGCCGGTGATCAATGTCTATACGCGGCTGATCAAG ACCAGCTCGCTCGCCGTCCTGATCGGAGTCGTGGACGTGACCAAGGTCGGCCAGCAGATCATCGAGCGCACGTACGAATC GGTGCTGATCTACGGCTTTCTGTTTCTATTCTTTTTTATCGTCTGTTATCCGCTGTCGGCCGCCTCGCGTGTGCTTGAAC GGCGCTGGAATCACGCATGA
Upstream 100 bases:
>100_bases TACAAAACCTACGAGATGCTCGCGGTGATGACCGGTCTGTGTGTGTTGCTGTTCCTGCCGTTGTCTTTGTTGCTCGGTCT TCTGGAAAGGAGGCTCCAGC
Downstream 100 bases:
>100_bases GCACATTGATCGAACTGTCCGGCTTCAGCAAAAACTTTGGTGACACCCCGGTGCTCCGAGACATCGACCTGAGCGTGAAA GAGGGCGAAGTCGTGGTGAT
Product: amino acid ABC transporter permease
Products: ADP; phosphate; L-glutamine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 219; Mature: 218
Protein sequence:
>219_residues MASSGLELLWVSAPQLITGAGRTLGISLLAIVFSSIGGVGYGVLRSLGKRWLEVPLRIYLELFRAIPVLVWLYLFFFGLP IFLGVSIPAFWCAVLVLSLWGASEVGEVVRGGLRSIPRGQREAGLAIGLGLGQLYGRVLLPQALKRLTPPVINVYTRLIK TSSLAVLIGVVDVTKVGQQIIERTYESVLIYGFLFLFFFIVCYPLSAASRVLERRWNHA
Sequences:
>Translated_219_residues MASSGLELLWVSAPQLITGAGRTLGISLLAIVFSSIGGVGYGVLRSLGKRWLEVPLRIYLELFRAIPVLVWLYLFFFGLP IFLGVSIPAFWCAVLVLSLWGASEVGEVVRGGLRSIPRGQREAGLAIGLGLGQLYGRVLLPQALKRLTPPVINVYTRLIK TSSLAVLIGVVDVTKVGQQIIERTYESVLIYGFLFLFFFIVCYPLSAASRVLERRWNHA >Mature_218_residues ASSGLELLWVSAPQLITGAGRTLGISLLAIVFSSIGGVGYGVLRSLGKRWLEVPLRIYLELFRAIPVLVWLYLFFFGLPI FLGVSIPAFWCAVLVLSLWGASEVGEVVRGGLRSIPRGQREAGLAIGLGLGQLYGRVLLPQALKRLTPPVINVYTRLIKT SSLAVLIGVVDVTKVGQQIIERTYESVLIYGFLFLFFFIVCYPLSAASRVLERRWNHA
Specific function: Part of a binding-protein-dependent transport system for arginine. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0765
COG function: function code E; ABC-type amino acid transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787030, Length=208, Percent_Identity=34.6153846153846, Blast_Score=111, Evalue=5e-26, Organism=Escherichia coli, GI87082239, Length=209, Percent_Identity=33.4928229665072, Blast_Score=103, Evalue=6e-24, Organism=Escherichia coli, GI1788226, Length=220, Percent_Identity=32.2727272727273, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI1786874, Length=207, Percent_Identity=31.4009661835749, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1788645, Length=218, Percent_Identity=27.9816513761468, Blast_Score=87, Evalue=7e-19, Organism=Escherichia coli, GI1787086, Length=211, Percent_Identity=27.4881516587678, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1786873, Length=214, Percent_Identity=29.9065420560748, Blast_Score=74, Evalue=5e-15, Organism=Escherichia coli, GI48994930, Length=132, Percent_Identity=28.7878787878788, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1788646, Length=172, Percent_Identity=27.3255813953488, Blast_Score=68, Evalue=5e-13, Organism=Escherichia coli, GI1787087, Length=194, Percent_Identity=28.8659793814433, Blast_Score=66, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 24078; Mature: 23947
Theoretical pI: Translated: 10.47; Mature: 10.47
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASSGLELLWVSAPQLITGAGRTLGISLLAIVFSSIGGVGYGVLRSLGKRWLEVPLRIYL CCCCCCEEEEECCCHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH ELFRAIPVLVWLYLFFFGLPIFLGVSIPAFWCAVLVLSLWGASEVGEVVRGGLRSIPRGQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCC REAGLAIGLGLGQLYGRVLLPQALKRLTPPVINVYTRLIKTSSLAVLIGVVDVTKVGQQI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IERTYESVLIYGFLFLFFFIVCYPLSAASRVLERRWNHA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure ASSGLELLWVSAPQLITGAGRTLGISLLAIVFSSIGGVGYGVLRSLGKRWLEVPLRIYL CCCCCEEEEECCCHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH ELFRAIPVLVWLYLFFFGLPIFLGVSIPAFWCAVLVLSLWGASEVGEVVRGGLRSIPRGQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCC REAGLAIGLGLGQLYGRVLLPQALKRLTPPVINVYTRLIKTSSLAVLIGVVDVTKVGQQI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IERTYESVLIYGFLFLFFFIVCYPLSAASRVLERRWNHA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamine [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamine [Periplasm] + H2O = ADP + phosphate + L-glutamine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]