| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is glnH [H]
Identifier: 66046172
GI number: 66046172
Start: 3532243
End: 3533115
Strand: Reverse
Name: glnH [H]
Synonym: Psyr_2941
Alternate gene names: 66046172
Gene position: 3533115-3532243 (Counterclockwise)
Preceding gene: 66046173
Following gene: 66046171
Centisome position: 57.98
GC content: 58.76
Gene sequence:
>873_bases GTGAGCTTCAAGACTGCCCTCGTATTATCGTTGATTGCCTTCACCCTGCTGGCCGGTTGCGACAAGCCTGCCGAACAGAA GCCCGTGGCCAAGGCTGCCCCTTCACCGTCCAGCAGCTACCTGGAAACCATCAAGGCCCGTGACAAGCTGATTGTCGGCG TGTTCAGCGATAAACCGCCTTTTGGCTTCGTCAACGAGCAGGGCCAGTACGTCGGTTTCGACACTGACCTGGGCAAGCGT TTCGCCAAGGACCTGCTGGGCGACGAGAAGAAGGTCGAGTTCGTGGTGGTCGAGCCCGCCAGCCGCATACCGTTTCTGCA GAGTGACAAGGTAGATTTGATTCTGGCCAACATGACCGTCACGCCGGAACGTCGGGAGGCGGTGGATTTCACCCATCCGA ATCTGCGTGTTGCAGTCCAGGCGCTGGTGCCGCAAGCCAGCCCGGTCAAGACCCTGGACGATCTGGCGAGCAAGACCACC ATCGTCACCACCGGCACCACCGCTGATATCTGGCTGACGAAAAATCACCCTGACTGGAAAGTGCTGAAATTCGAGAAAAA CTCCGAGTCGCTGCAGGCGCTGGCCAATGGTCGTGGCGATGCCTATGCGCAGGACAATCTGGTGCTGTTCAGCTGGGCGA AGAAAAACCCCGGCTACCGCGTGCTGGAGCAGAAACTCGGTGACGAAGCGCCAATCGCCCCTGCAGTCAAAAAAGGCAAT ATCGAGCTGCGCGACTGGGTCAATACCGAACTGGCCAGACTGGGCGAAGAGAAATACCTGCTCAAGCTCTACGACCAGTA TGTACGCCCGGAACTGGCCGAGGGCACAGACCCCAACGCGGTCATCGTCGAAGGCGGAAGCTGGAAGCCTTGA
Upstream 100 bases:
>100_bases ACGACCCCGAAACTTTCTTCAGCGCCCCGCAGACCGCACGCGCGCAGCAGTTCCTGGAGAGGTTCTCCTACGTGGAAAAC ATGCCAAAAAGGAAAGCATC
Downstream 100 bases:
>100_bases TGGCAGAGGCCTGACGGTATTGACTGAATGGCGAACCGGCTCAATGCCGGTTCGTTTTACTGCATGAGCGGCAATCGCAC TGGTTACGCCGAACAAGCTT
Product: extracellular solute-binding protein
Products: ADP; phosphate; L-arginine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MSFKTALVLSLIAFTLLAGCDKPAEQKPVAKAAPSPSSSYLETIKARDKLIVGVFSDKPPFGFVNEQGQYVGFDTDLGKR FAKDLLGDEKKVEFVVVEPASRIPFLQSDKVDLILANMTVTPERREAVDFTHPNLRVAVQALVPQASPVKTLDDLASKTT IVTTGTTADIWLTKNHPDWKVLKFEKNSESLQALANGRGDAYAQDNLVLFSWAKKNPGYRVLEQKLGDEAPIAPAVKKGN IELRDWVNTELARLGEEKYLLKLYDQYVRPELAEGTDPNAVIVEGGSWKP
Sequences:
>Translated_290_residues MSFKTALVLSLIAFTLLAGCDKPAEQKPVAKAAPSPSSSYLETIKARDKLIVGVFSDKPPFGFVNEQGQYVGFDTDLGKR FAKDLLGDEKKVEFVVVEPASRIPFLQSDKVDLILANMTVTPERREAVDFTHPNLRVAVQALVPQASPVKTLDDLASKTT IVTTGTTADIWLTKNHPDWKVLKFEKNSESLQALANGRGDAYAQDNLVLFSWAKKNPGYRVLEQKLGDEAPIAPAVKKGN IELRDWVNTELARLGEEKYLLKLYDQYVRPELAEGTDPNAVIVEGGSWKP >Mature_289_residues SFKTALVLSLIAFTLLAGCDKPAEQKPVAKAAPSPSSSYLETIKARDKLIVGVFSDKPPFGFVNEQGQYVGFDTDLGKRF AKDLLGDEKKVEFVVVEPASRIPFLQSDKVDLILANMTVTPERREAVDFTHPNLRVAVQALVPQASPVKTLDDLASKTTI VTTGTTADIWLTKNHPDWKVLKFEKNSESLQALANGRGDAYAQDNLVLFSWAKKNPGYRVLEQKLGDEAPIAPAVKKGNI ELRDWVNTELARLGEEKYLLKLYDQYVRPELAEGTDPNAVIVEGGSWKP
Specific function: Part of the ABC transporter complex glnHMPQ involved in glutamine transport [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1787085, Length=234, Percent_Identity=28.6324786324786, Blast_Score=95, Evalue=5e-21, Organism=Escherichia coli, GI1787088, Length=215, Percent_Identity=28.3720930232558, Blast_Score=92, Evalue=5e-20, Organism=Escherichia coli, GI1788228, Length=232, Percent_Identity=28.0172413793103, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1787031, Length=230, Percent_Identity=30.8695652173913, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1788649, Length=273, Percent_Identity=24.5421245421245, Blast_Score=68, Evalue=6e-13, Organism=Escherichia coli, GI1786876, Length=179, Percent_Identity=24.5810055865922, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1788648, Length=221, Percent_Identity=25.3393665158371, Blast_Score=62, Evalue=4e-11,
Paralogues:
None
Copy number: 1180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 32000; Mature: 31869
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFKTALVLSLIAFTLLAGCDKPAEQKPVAKAAPSPSSSYLETIKARDKLIVGVFSDKPP CCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCHHHHHHHHCCCEEEEEEECCCCC FGFVNEQGQYVGFDTDLGKRFAKDLLGDEKKVEFVVVEPASRIPFLQSDKVDLILANMTV CCCCCCCCCEEECCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCEEEEEEEEEE TPERREAVDFTHPNLRVAVQALVPQASPVKTLDDLASKTTIVTTGTTADIWLTKNHPDWK CCCHHHCCCCCCCCHHEEHHHHCCCCCCCHHHHHHHCCCEEEEECCCEEEEEECCCCCEE VLKFEKNSESLQALANGRGDAYAQDNLVLFSWAKKNPGYRVLEQKLGDEAPIAPAVKKGN EEEEECCHHHHHHHHCCCCCCEECCCEEEEEECCCCCCHHHHHHHCCCCCCCCCCHHCCC IELRDWVNTELARLGEEKYLLKLYDQYVRPELAEGTDPNAVIVEGGSWKP EEEHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCC >Mature Secondary Structure SFKTALVLSLIAFTLLAGCDKPAEQKPVAKAAPSPSSSYLETIKARDKLIVGVFSDKPP CHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCHHHHHHHHCCCEEEEEEECCCCC FGFVNEQGQYVGFDTDLGKRFAKDLLGDEKKVEFVVVEPASRIPFLQSDKVDLILANMTV CCCCCCCCCEEECCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCEEEEEEEEEE TPERREAVDFTHPNLRVAVQALVPQASPVKTLDDLASKTTIVTTGTTADIWLTKNHPDWK CCCHHHCCCCCCCCHHEEHHHHCCCCCCCHHHHHHHCCCEEEEECCCEEEEEECCCCCEE VLKFEKNSESLQALANGRGDAYAQDNLVLFSWAKKNPGYRVLEQKLGDEAPIAPAVKKGN EEEEECCHHHHHHHHCCCCCCEECCCEEEEEECCCCCCHHHHHHHCCCCCCCCCCHHCCC IELRDWVNTELARLGEEKYLLKLYDQYVRPELAEGTDPNAVIVEGGSWKP EEEHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-arginine [Periplasm]; H2O [C]
Specific reaction: ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7551042; 9384377 [H]