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The map label for this gene is 66046147

Identifier: 66046147

GI number: 66046147

Start: 3504820

End: 3505764

Strand: Direct

Name: 66046147

Synonym: Psyr_2916

Alternate gene names: NA

Gene position: 3504820-3505764 (Clockwise)

Preceding gene: 66046144

Following gene: 66046148

Centisome position: 57.52

GC content: 60.0

Gene sequence:

>945_bases
ATGAACCGACTGATTGGCTGCAGCGTGCTTGCACTTGGCGCCAGCGCTCTGTTGAGCAGCAATGTAATGGCAGTTGATGC
CGCTTCATGCCAGAACGTGCGCATGGGTGTAGTGAACTGGACCGACGTGATCGCAACCAGCGCCATGACCCAAGTGTTGC
TCGACGGCCTCGGTTACAAGACCAAACAGACCAGCGCGTCCCAGCAAATCATTTTCGCCGGCATCCGCGACCAGCGCCTG
GATCTCTTTCTGGGCTACTGGAACCCGCTGATGACCCAGACCATCGCGCCGTTTGTCGAGGCCCGGAAAGTCAAAGTGCT
CGACAAACCGAGCCTGGAAGACGCTCGCGCCACCCTCGCCGTGCCGACTTACCTGGCGGACAAGGGCCTGAAGTCCTTTG
CCGATATCGCCAGGTTCGAGAAGGAACTGGGCGGCAAAATCTACGGCATCGAGCCTGGTTCAGGCGCCAATACCCAGATC
AAGGCGATGATCGCCAAAAACCAGTTCGGTCTGGGCAAATTCCAGCTGGTGGAGTCCAGCGAAGCCGGCATGCTCGCCGC
CGTGGACCGCGCCGTACGCCGCAAGGAAGCCGTGGTGTTTTTCGGCTGGACGCCGCACCCGATGAACGTCAACGTGGCGA
TGACTTACCTCAATGGCAGCGACGACGCCCTGGGCCCGAACGAGGGCATGGCCACTGTGTGGACGGTCACTTCGCCGACT
TATGCCGAACAGTGCCCCAACGTGCACAAATTGCTGACTAACCTGACGTTCACCGCCGCCGACGAGAGCCGGATGATGCA
GCCGCTACTGGATCACAAGGATGCTCTTGAGTCCGCCAGACAATGGCTCAAAGACCATCCGCAAGACCAGGCGCGCTGGC
TGGAAGGCGTCACCACCTTCGACGGCAAACCGGCTGCGGCAAACCTTCAATCGAGCAGCCAATAA

Upstream 100 bases:

>100_bases
CGCTGCAGTGCGCTTCGGCGCCCTCCAGGCAGGGTAATTTGCTTCCACGGTGCACAAAGACGCCGACACCCCACAATAAC
GATCTGCCGAGGGCCCCACC

Downstream 100 bases:

>100_bases
CCCGATTTTGAACGGCCGTTTCGCGAGCATCCGTGGTCGCGAACGGCGTCCTCACGCCTGTAAGGAGCCCCCCATGAACC
ACGACGTCATCATCACCTGC

Product: substrate-binding region of ABC-type glycine betaine transport system

Products: NA

Alternate protein names: Fragment [H]

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MNRLIGCSVLALGASALLSSNVMAVDAASCQNVRMGVVNWTDVIATSAMTQVLLDGLGYKTKQTSASQQIIFAGIRDQRL
DLFLGYWNPLMTQTIAPFVEARKVKVLDKPSLEDARATLAVPTYLADKGLKSFADIARFEKELGGKIYGIEPGSGANTQI
KAMIAKNQFGLGKFQLVESSEAGMLAAVDRAVRRKEAVVFFGWTPHPMNVNVAMTYLNGSDDALGPNEGMATVWTVTSPT
YAEQCPNVHKLLTNLTFTAADESRMMQPLLDHKDALESARQWLKDHPQDQARWLEGVTTFDGKPAAANLQSSSQ

Sequences:

>Translated_314_residues
MNRLIGCSVLALGASALLSSNVMAVDAASCQNVRMGVVNWTDVIATSAMTQVLLDGLGYKTKQTSASQQIIFAGIRDQRL
DLFLGYWNPLMTQTIAPFVEARKVKVLDKPSLEDARATLAVPTYLADKGLKSFADIARFEKELGGKIYGIEPGSGANTQI
KAMIAKNQFGLGKFQLVESSEAGMLAAVDRAVRRKEAVVFFGWTPHPMNVNVAMTYLNGSDDALGPNEGMATVWTVTSPT
YAEQCPNVHKLLTNLTFTAADESRMMQPLLDHKDALESARQWLKDHPQDQARWLEGVTTFDGKPAAANLQSSSQ
>Mature_314_residues
MNRLIGCSVLALGASALLSSNVMAVDAASCQNVRMGVVNWTDVIATSAMTQVLLDGLGYKTKQTSASQQIIFAGIRDQRL
DLFLGYWNPLMTQTIAPFVEARKVKVLDKPSLEDARATLAVPTYLADKGLKSFADIARFEKELGGKIYGIEPGSGANTQI
KAMIAKNQFGLGKFQLVESSEAGMLAAVDRAVRRKEAVVFFGWTPHPMNVNVAMTYLNGSDDALGPNEGMATVWTVTSPT
YAEQCPNVHKLLTNLTFTAADESRMMQPLLDHKDALESARQWLKDHPQDQARWLEGVTTFDGKPAAANLQSSSQ

Specific function: Unknown

COG id: COG2113

COG function: function code E; ABC-type proline/glycine betaine transport systems, periplasmic components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007210 [H]

Pfam domain/function: PF04069 OpuAC [H]

EC number: NA

Molecular weight: Translated: 34130; Mature: 34130

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: PS00443 GATASE_TYPE_II

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRLIGCSVLALGASALLSSNVMAVDAASCQNVRMGVVNWTDVIATSAMTQVLLDGLGYK
CCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCC
TKQTSASQQIIFAGIRDQRLDLFLGYWNPLMTQTIAPFVEARKVKVLDKPSLEDARATLA
CCCCCCCCEEEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHEEE
VPTYLADKGLKSFADIARFEKELGGKIYGIEPGSGANTQIKAMIAKNQFGLGKFQLVESS
HHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEEECCCCCCCEEEEEECC
EAGMLAAVDRAVRRKEAVVFFGWTPHPMNVNVAMTYLNGSDDALGPNEGMATVWTVTSPT
CCCHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEECCCH
YAEQCPNVHKLLTNLTFTAADESRMMQPLLDHKDALESARQWLKDHPQDQARWLEGVTTF
HHHHCCCHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCC
DGKPAAANLQSSSQ
CCCCCCCCCCCCCC
>Mature Secondary Structure
MNRLIGCSVLALGASALLSSNVMAVDAASCQNVRMGVVNWTDVIATSAMTQVLLDGLGYK
CCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCC
TKQTSASQQIIFAGIRDQRLDLFLGYWNPLMTQTIAPFVEARKVKVLDKPSLEDARATLA
CCCCCCCCEEEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHEEE
VPTYLADKGLKSFADIARFEKELGGKIYGIEPGSGANTQIKAMIAKNQFGLGKFQLVESS
HHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEEECCCCCCCEEEEEECC
EAGMLAAVDRAVRRKEAVVFFGWTPHPMNVNVAMTYLNGSDDALGPNEGMATVWTVTSPT
CCCHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEECCCH
YAEQCPNVHKLLTNLTFTAADESRMMQPLLDHKDALESARQWLKDHPQDQARWLEGVTTF
HHHHCCCHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCC
DGKPAAANLQSSSQ
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10708384 [H]