| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66046089
Identifier: 66046089
GI number: 66046089
Start: 3427948
End: 3428691
Strand: Reverse
Name: 66046089
Synonym: Psyr_2856
Alternate gene names: NA
Gene position: 3428691-3427948 (Counterclockwise)
Preceding gene: 66046090
Following gene: 66046082
Centisome position: 56.27
GC content: 52.02
Gene sequence:
>744_bases ATGAATGAATCTGCTAGCGCACAACCCAGACACGGTATGGTAACCAGTCCCGAATCCCGTGGTTCTTATGCCATATCCAA AGGGCTGTTGCTGGAGTGGGAGGTGGTCGCTATGGAAGGAGGCAAAAACTTTCCAGACGAGACATTTGGTCTTGCGCACG ACTTCCCTGGCGTCGATGAGCCTATTAATCTCGATCCGCCTGCGTCAGCGCCGCCGCTTGCCAACCCGCCACCAGACGGA CTCATACTGAGCGGGGGGCAAGATGATCGGCGTAAATGCTTGAACCTGACGGATGTCGGGATCATTGAGGAAATAACGCA AAAAGGTCATGGTGCGGCTGAAAAGTGGCCTCGGTTGAGCGTTGCGGGTGGAGACGAGTTTGAAGTTAGATGGGCGTACC ATGCCGTACATGTCACACGCGGCTACCGGTGGTTTATTACCAAAGACGGCTGGGATGAAAGCAAACCCATTACGCGGGAA GCCTTCCAGGGAAAGAACTACGTCAGTGATAACCACTTCAAAGCGGACGGTCAAGACGGATTGATGTGGAGCGATATCTC GCCGTTGAGTCCTTTTGATAAACACCGGGATGAGCTTCAGCCCGCAGAGATTACAAAAGCAACATTACCCAGCGATAAAC ACGGACATCATGTCATTCTTCTTGCCTGGATCGTCGCCGAAACCGATAAAGCGTTTTATCAGGCGTTTGATGTCGATTTT GATGTGCCCGTGTCTGGAAAATGA
Upstream 100 bases:
>100_bases AAATCTACTGGCTGAACTGCTAGCTATCCCGTCCGTGAAAGCAGGTCTTCAATTGTGCAACAGGCAAGGCATGCCTGATT CAATAATTGAGGATATGGAC
Downstream 100 bases:
>100_bases GGCGGTAGATGTGAAGGGCAGGGTGCAAGCGTCCAGCGAAGCGTTGCCCATGCTTGTTCTGCATAAGGAATAGATGATCA GAAAGCCCGGCTTCAGCGCC
Product: chitin-binding domain-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 247; Mature: 247
Protein sequence:
>247_residues MNESASAQPRHGMVTSPESRGSYAISKGLLLEWEVVAMEGGKNFPDETFGLAHDFPGVDEPINLDPPASAPPLANPPPDG LILSGGQDDRRKCLNLTDVGIIEEITQKGHGAAEKWPRLSVAGGDEFEVRWAYHAVHVTRGYRWFITKDGWDESKPITRE AFQGKNYVSDNHFKADGQDGLMWSDISPLSPFDKHRDELQPAEITKATLPSDKHGHHVILLAWIVAETDKAFYQAFDVDF DVPVSGK
Sequences:
>Translated_247_residues MNESASAQPRHGMVTSPESRGSYAISKGLLLEWEVVAMEGGKNFPDETFGLAHDFPGVDEPINLDPPASAPPLANPPPDG LILSGGQDDRRKCLNLTDVGIIEEITQKGHGAAEKWPRLSVAGGDEFEVRWAYHAVHVTRGYRWFITKDGWDESKPITRE AFQGKNYVSDNHFKADGQDGLMWSDISPLSPFDKHRDELQPAEITKATLPSDKHGHHVILLAWIVAETDKAFYQAFDVDF DVPVSGK >Mature_247_residues MNESASAQPRHGMVTSPESRGSYAISKGLLLEWEVVAMEGGKNFPDETFGLAHDFPGVDEPINLDPPASAPPLANPPPDG LILSGGQDDRRKCLNLTDVGIIEEITQKGHGAAEKWPRLSVAGGDEFEVRWAYHAVHVTRGYRWFITKDGWDESKPITRE AFQGKNYVSDNHFKADGQDGLMWSDISPLSPFDKHRDELQPAEITKATLPSDKHGHHVILLAWIVAETDKAFYQAFDVDF DVPVSGK
Specific function: Unknown
COG id: COG3397
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27301; Mature: 27301
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNESASAQPRHGMVTSPESRGSYAISKGLLLEWEVVAMEGGKNFPDETFGLAHDFPGVDE CCCCCCCCCCCCCCCCCCCCCCEEECCCEEEEEEEEEEECCCCCCHHHCCCCCCCCCCCC PINLDPPASAPPLANPPPDGLILSGGQDDRRKCLNLTDVGIIEEITQKGHGAAEKWPRLS CCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHCCCCHHHHHHHHHHCCCCCHHHCCEEE VAGGDEFEVRWAYHAVHVTRGYRWFITKDGWDESKPITREAFQGKNYVSDNHFKADGQDG ECCCCCEEEEEEEEEEEEECCEEEEEEECCCCCCCCCHHHHHCCCCCCCCCCEECCCCCC LMWSDISPLSPFDKHRDELQPAEITKATLPSDKHGHHVILLAWIVAETDKAFYQAFDVDF EEECCCCCCCCHHHHHHHCCHHHHHHHCCCCCCCCCEEEEEEEEHHHCCHHHHHHCCCCC DVPVSGK CCCCCCC >Mature Secondary Structure MNESASAQPRHGMVTSPESRGSYAISKGLLLEWEVVAMEGGKNFPDETFGLAHDFPGVDE CCCCCCCCCCCCCCCCCCCCCCEEECCCEEEEEEEEEEECCCCCCHHHCCCCCCCCCCCC PINLDPPASAPPLANPPPDGLILSGGQDDRRKCLNLTDVGIIEEITQKGHGAAEKWPRLS CCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHCCCCHHHHHHHHHHCCCCCHHHCCEEE VAGGDEFEVRWAYHAVHVTRGYRWFITKDGWDESKPITREAFQGKNYVSDNHFKADGQDG ECCCCCEEEEEEEEEEEEECCEEEEEEECCCCCCCCCHHHHHCCCCCCCCCCEECCCCCC LMWSDISPLSPFDKHRDELQPAEITKATLPSDKHGHHVILLAWIVAETDKAFYQAFDVDF EEECCCCCCCCHHHHHHHCCHHHHHHHCCCCCCCCCEEEEEEEEHHHCCHHHHHHCCCCC DVPVSGK CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA