Click here to switch to the map view.

The map label for this gene is 66046078

Identifier: 66046078

GI number: 66046078

Start: 3415442

End: 3417574

Strand: Direct

Name: 66046078

Synonym: Psyr_2843

Alternate gene names: NA

Gene position: 3415442-3417574 (Clockwise)

Preceding gene: 66046076

Following gene: 66046080

Centisome position: 56.05

GC content: 62.78

Gene sequence:

>2133_bases
ATGTCCGCTCACCAGAAGAAACACCCCTTCGATTTTAAAACCCAGTACAGCCTTGGCTTCAATCCGCAAGACGATGAGAT
CGTTGTGGACTTCTTCTGCGGTGGCGGCGGCGCCGGTACCGGGCTGGAGATGGGCCTTGGGCGCACCGTCAGCGTGGCCA
AGAATCACAGCCCGGCAGCGATCAGCATGCACACCGTGAATCACCCGGGTGCGAAGCACTTCACGACCGATGTATTCGAC
GGCGATCCGGATACCGAATGCGGAGGCAAGGCCGTGGGCTGGTTCCACATGAGCCCGGATTGCACCCACCACAGCCAGGC
CGCTGGCGGGCAGCCACGCAAGCGCGAGATCCGCAACCTGTCGTGGATCGGCTTGAAGTGGGCAGGCAAGAAGAAACCCC
GCGTCATCAGCCTGGAGAACGTAAAGCAGATCCTGCAATGGGGCCCGCTGGTGGCCAAGCGTTGCAAGTCGACCGGGCGG
GTCGTGAAGCTGGGCGGCGGCATTGCTGCACCTGGTGAAGTTGTGCCAGTCGATCAGCAGTTTCTGGTGCCAGACCCTGC
CAGGCGCGGCCAGACGTGGGCGGTGTTCGTGGCCGAACTGGAGCGCCTGGGCTATGCCGTCGAGTGGCGTGTGATCCGAG
CGTGCGACTTCGGCGCGCCTACCAGCCGGGAACGCCTGTTCATGATTGCCCGCTGCGACGGACAGCCGATCGTGTGGCCA
GAGCCGACCCACGCCAAGCGCCCCGCCAAAGGCCAGAAGCCTTGGAGGACAGCCGCCGAGTGCATCGACTTCACCGACAT
GGGCAAAAGCATATTCGGACGCAAGAAAGACCTGGCGCCGGCCACCCTGCGCCGGGTCGCCAAGGGCATGAAGAAGTTCG
TCATCGACAACCCGGCCCCCTTCATTGTCCCGATCGCGAACTGGTCGGGCGAGACCGTGCAATCGGCCAACGAGCCGCTG
CGCACGGTGACTTCATATCCCAAAGGCGGCGCTTTCTCGGTCGTCAGCCCAGTCATTGCGCCAGCGACCCACCAAGGCAG
CGATCGCATCAACGATCCACTTGAGCCGCTGCCAACGGTGACGTGCGCCAACCGGGGCGAACTGACGCTGATCAGCCCGA
CCCTGATCCAGTCTGGCTACGGTGAGCGCGAAGGCCAACAGCCTCGCGTGCCGGGTATCGATCAGCCATTAGGGACGGTC
GTTGCCGGTGGCGTTAAGCATGCGCTCACAAGCTCGATTCTGGTGGGCGCTGGCGGGCCAGTTTATTCAGGAAAGCCAGT
AGCGGCAGATCAGCCGGTGGGCACGTTGATGACTCAGAATCACAGAGCAGTGGCCACTGCATTCATGGCTCAGATGAACG
GTGGCTTCAACACCACCCACGCCAAAGGCGCTGACGAGCCCATGACGACGATCACCAATACTGGCAGCCAGCAGCAGCTG
GTGACCGCGACTCTGATCACCAACACAACGGGCCACGGACCGACGAGCCTGGAAAGTCCGGTACCGACCCTGACAACTGG
TCAGCACCACGCTCTTGTGGCCGCAAACCTGGTGCACCTGCGCGGCAACTGTGACGCGCTGGACACCGCCGATCCGCTGC
ACACCATCAGCGCGGGCGGCCAGCACCATGGACTGGTCACCGCGTTCATGGAAAGGCAGTTCGGTGCCAGCGTCGGTCAG
CCTCTGGATGAGCCAGCACCTACCGTTACAGCAGGTGGCGGCGGTAAAAGCTCTGTCGTATCTCTCAAGCTCTCCCCTGA
GCATGAGGAAGGTGCACTGCGCGTCGCCGCATTCTTGATCAGTTACTACGGGACCGAGAACGTCAGCGGTGCAGGTGAAC
CGGCACCAACGATCACGACCAAGGATCGCTTGGCGCTGGTCACCGTCATGGTCAAGGGCACGCCCTACGTGATCGTCGAC
ATCTGCCTGCGGATGCTCAAGCCGTCCGAGCTGTACAAGGCTCAGGGCTTCCCCGCTGACTACGTCATCACCCACGGCGC
AGACGGCAAGCCATTCACCAAAACCCAGCAGGTGCACATGTGCGGCAACAGCGTCAGTCCTCCGCCGATGGCAGCGCTCG
CTCGGGCCAATGATCCATGGCGCGTGTCTGAACACCAGGCCGCCGCGGCGTAA

Upstream 100 bases:

>100_bases
TGCCCCTTGCGTCCCATCTGTACCTCCTTTTCGGCCAAATACCGGGAAGCACACCAATACCCCACTTCAACGACTCACGC
CACCCCGGCGAGGATGAACT

Downstream 100 bases:

>100_bases
CAGGCAATAAGCGGATAAACAGCTAAGTACGTTGCAGGCTTATCCCGGGCTGGTTTTATTCTTCGCCAGTTGTTTCCGAA
GAGCTTATGCCATACATCTT

Product: C-5 cytosine-specific DNA methylase

Products: NA

Alternate protein names: Site-Specific DNA Methylase; DNA Cytosine Methyltransferase; Methylase; Cytosine-Specific Methylase; C-5 Cytosine-Specific DNA Methylase Family Protein; DNA-Methyltransferase; Prophage LambdaSo Type II DNA Methyltransferase; Prophage DNA Cytosine Methylase; DNA Methyltransferase; DNA Methylase; DNA Cytosine Methyltransferase Family Protein; C-5 Cytosine-Specific DNA Methylase Superfamily

Number of amino acids: Translated: 710; Mature: 709

Protein sequence:

>710_residues
MSAHQKKHPFDFKTQYSLGFNPQDDEIVVDFFCGGGGAGTGLEMGLGRTVSVAKNHSPAAISMHTVNHPGAKHFTTDVFD
GDPDTECGGKAVGWFHMSPDCTHHSQAAGGQPRKREIRNLSWIGLKWAGKKKPRVISLENVKQILQWGPLVAKRCKSTGR
VVKLGGGIAAPGEVVPVDQQFLVPDPARRGQTWAVFVAELERLGYAVEWRVIRACDFGAPTSRERLFMIARCDGQPIVWP
EPTHAKRPAKGQKPWRTAAECIDFTDMGKSIFGRKKDLAPATLRRVAKGMKKFVIDNPAPFIVPIANWSGETVQSANEPL
RTVTSYPKGGAFSVVSPVIAPATHQGSDRINDPLEPLPTVTCANRGELTLISPTLIQSGYGEREGQQPRVPGIDQPLGTV
VAGGVKHALTSSILVGAGGPVYSGKPVAADQPVGTLMTQNHRAVATAFMAQMNGGFNTTHAKGADEPMTTITNTGSQQQL
VTATLITNTTGHGPTSLESPVPTLTTGQHHALVAANLVHLRGNCDALDTADPLHTISAGGQHHGLVTAFMERQFGASVGQ
PLDEPAPTVTAGGGGKSSVVSLKLSPEHEEGALRVAAFLISYYGTENVSGAGEPAPTITTKDRLALVTVMVKGTPYVIVD
ICLRMLKPSELYKAQGFPADYVITHGADGKPFTKTQQVHMCGNSVSPPPMAALARANDPWRVSEHQAAAA

Sequences:

>Translated_710_residues
MSAHQKKHPFDFKTQYSLGFNPQDDEIVVDFFCGGGGAGTGLEMGLGRTVSVAKNHSPAAISMHTVNHPGAKHFTTDVFD
GDPDTECGGKAVGWFHMSPDCTHHSQAAGGQPRKREIRNLSWIGLKWAGKKKPRVISLENVKQILQWGPLVAKRCKSTGR
VVKLGGGIAAPGEVVPVDQQFLVPDPARRGQTWAVFVAELERLGYAVEWRVIRACDFGAPTSRERLFMIARCDGQPIVWP
EPTHAKRPAKGQKPWRTAAECIDFTDMGKSIFGRKKDLAPATLRRVAKGMKKFVIDNPAPFIVPIANWSGETVQSANEPL
RTVTSYPKGGAFSVVSPVIAPATHQGSDRINDPLEPLPTVTCANRGELTLISPTLIQSGYGEREGQQPRVPGIDQPLGTV
VAGGVKHALTSSILVGAGGPVYSGKPVAADQPVGTLMTQNHRAVATAFMAQMNGGFNTTHAKGADEPMTTITNTGSQQQL
VTATLITNTTGHGPTSLESPVPTLTTGQHHALVAANLVHLRGNCDALDTADPLHTISAGGQHHGLVTAFMERQFGASVGQ
PLDEPAPTVTAGGGGKSSVVSLKLSPEHEEGALRVAAFLISYYGTENVSGAGEPAPTITTKDRLALVTVMVKGTPYVIVD
ICLRMLKPSELYKAQGFPADYVITHGADGKPFTKTQQVHMCGNSVSPPPMAALARANDPWRVSEHQAAAA
>Mature_709_residues
SAHQKKHPFDFKTQYSLGFNPQDDEIVVDFFCGGGGAGTGLEMGLGRTVSVAKNHSPAAISMHTVNHPGAKHFTTDVFDG
DPDTECGGKAVGWFHMSPDCTHHSQAAGGQPRKREIRNLSWIGLKWAGKKKPRVISLENVKQILQWGPLVAKRCKSTGRV
VKLGGGIAAPGEVVPVDQQFLVPDPARRGQTWAVFVAELERLGYAVEWRVIRACDFGAPTSRERLFMIARCDGQPIVWPE
PTHAKRPAKGQKPWRTAAECIDFTDMGKSIFGRKKDLAPATLRRVAKGMKKFVIDNPAPFIVPIANWSGETVQSANEPLR
TVTSYPKGGAFSVVSPVIAPATHQGSDRINDPLEPLPTVTCANRGELTLISPTLIQSGYGEREGQQPRVPGIDQPLGTVV
AGGVKHALTSSILVGAGGPVYSGKPVAADQPVGTLMTQNHRAVATAFMAQMNGGFNTTHAKGADEPMTTITNTGSQQQLV
TATLITNTTGHGPTSLESPVPTLTTGQHHALVAANLVHLRGNCDALDTADPLHTISAGGQHHGLVTAFMERQFGASVGQP
LDEPAPTVTAGGGGKSSVVSLKLSPEHEEGALRVAAFLISYYGTENVSGAGEPAPTITTKDRLALVTVMVKGTPYVIVDI
CLRMLKPSELYKAQGFPADYVITHGADGKPFTKTQQVHMCGNSVSPPPMAALARANDPWRVSEHQAAAA

Specific function: Unknown

COG id: COG0270

COG function: function code L; Site-specific DNA methylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 75484; Mature: 75353

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: PS00178 AA_TRNA_LIGASE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAHQKKHPFDFKTQYSLGFNPQDDEIVVDFFCGGGGAGTGLEMGLGRTVSVAKNHSPAA
CCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCHHHCCCCEEEEECCCCCCE
ISMHTVNHPGAKHFTTDVFDGDPDTECGGKAVGWFHMSPDCTHHSQAAGGQPRKREIRNL
EEEEECCCCCCCCEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHCCC
SWIGLKWAGKKKPRVISLENVKQILQWGPLVAKRCKSTGRVVKLGGGIAAPGEVVPVDQQ
EEEEEEECCCCCCEEEEHHHHHHHHHHCHHHHHHHHCCCCEEEECCCCCCCCCEECCCCC
FLVPDPARRGQTWAVFVAELERLGYAVEWRVIRACDFGAPTSRERLFMIARCDGQPIVWP
EECCCHHHCCCEEEHHHHHHHHCCEEEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCC
EPTHAKRPAKGQKPWRTAAECIDFTDMGKSIFGRKKDLAPATLRRVAKGMKKFVIDNPAP
CCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCC
FIVPIANWSGETVQSANEPLRTVTSYPKGGAFSVVSPVIAPATHQGSDRINDPLEPLPTV
EEEEECCCCCHHHHHCCCHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCE
TCANRGELTLISPTLIQSGYGEREGQQPRVPGIDQPLGTVVAGGVKHALTSSILVGAGGP
EECCCCCEEEECHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEECCCC
VYSGKPVAADQPVGTLMTQNHRAVATAFMAQMNGGFNTTHAKGADEPMTTITNTGSQQQL
CCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHEECCCCCCEE
VTATLITNTTGHGPTSLESPVPTLTTGQHHALVAANLVHLRGNCDALDTADPLHTISAGG
EEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCHHHHCCCC
QHHGLVTAFMERQFGASVGQPLDEPAPTVTAGGGGKSSVVSLKLSPEHEEGALRVAAFLI
CCCCHHHHHHHHHHCHHHCCCCCCCCCEEEECCCCCCEEEEEEECCCCCCHHHHHHHHHH
SYYGTENVSGAGEPAPTITTKDRLALVTVMVKGTPYVIVDICLRMLKPSELYKAQGFPAD
HHHCCCCCCCCCCCCCCEECCCCEEEEEEEECCCCEEHHHHHHHHCCCHHHHHHCCCCCC
YVITHGADGKPFTKTQQVHMCGNSVSPPPMAALARANDPWRVSEHQAAAA
EEEEECCCCCCCCCCCEEEECCCCCCCCCHHHHHCCCCCCCCCCCHHCCC
>Mature Secondary Structure 
SAHQKKHPFDFKTQYSLGFNPQDDEIVVDFFCGGGGAGTGLEMGLGRTVSVAKNHSPAA
CCCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCHHHCCCCEEEEECCCCCCE
ISMHTVNHPGAKHFTTDVFDGDPDTECGGKAVGWFHMSPDCTHHSQAAGGQPRKREIRNL
EEEEECCCCCCCCEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHCCC
SWIGLKWAGKKKPRVISLENVKQILQWGPLVAKRCKSTGRVVKLGGGIAAPGEVVPVDQQ
EEEEEEECCCCCCEEEEHHHHHHHHHHCHHHHHHHHCCCCEEEECCCCCCCCCEECCCCC
FLVPDPARRGQTWAVFVAELERLGYAVEWRVIRACDFGAPTSRERLFMIARCDGQPIVWP
EECCCHHHCCCEEEHHHHHHHHCCEEEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCC
EPTHAKRPAKGQKPWRTAAECIDFTDMGKSIFGRKKDLAPATLRRVAKGMKKFVIDNPAP
CCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCC
FIVPIANWSGETVQSANEPLRTVTSYPKGGAFSVVSPVIAPATHQGSDRINDPLEPLPTV
EEEEECCCCCHHHHHCCCHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCE
TCANRGELTLISPTLIQSGYGEREGQQPRVPGIDQPLGTVVAGGVKHALTSSILVGAGGP
EECCCCCEEEECHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEECCCC
VYSGKPVAADQPVGTLMTQNHRAVATAFMAQMNGGFNTTHAKGADEPMTTITNTGSQQQL
CCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHEECCCCCCEE
VTATLITNTTGHGPTSLESPVPTLTTGQHHALVAANLVHLRGNCDALDTADPLHTISAGG
EEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCHHHHCCCC
QHHGLVTAFMERQFGASVGQPLDEPAPTVTAGGGGKSSVVSLKLSPEHEEGALRVAAFLI
CCCCHHHHHHHHHHCHHHCCCCCCCCCEEEECCCCCCEEEEEEECCCCCCHHHHHHHHHH
SYYGTENVSGAGEPAPTITTKDRLALVTVMVKGTPYVIVDICLRMLKPSELYKAQGFPAD
HHHCCCCCCCCCCCCCCEECCCCEEEEEEEECCCCEEHHHHHHHHCCCHHHHHHCCCCCC
YVITHGADGKPFTKTQQVHMCGNSVSPPPMAALARANDPWRVSEHQAAAA
EEEEECCCCCCCCCCCEEEECCCCCCCCCHHHHHCCCCCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA