| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66046077
Identifier: 66046077
GI number: 66046077
Start: 3414579
End: 3415406
Strand: Reverse
Name: 66046077
Synonym: Psyr_2842
Alternate gene names: NA
Gene position: 3415406-3414579 (Counterclockwise)
Preceding gene: 66046079
Following gene: 66046075
Centisome position: 56.05
GC content: 45.29
Gene sequence:
>828_bases GTGGGGTATTGGTGTGCTTCCCGGTATTTGGCCGAAAAGGAGGTACAGATGGGACGCAAGGGGCAATGGTGGAACACAAA AGCCAAGGCATTATCGGGTCGGAAGCATGTTGAAAAGGCAGGAGTGAAACATAAAGCTTCTAATAAAAATAAACTGATAG GTAACGTTGATTTTTCAGAATCGATTGCTTCCAGAGTTCAATCAGTTTATCGCTATTTTGATGACGAAAAATTCGCCGAT GCTTTTGTTCAAGGCGCTATTTATATAAGCACGCTAGAGAAGTGTCGGCAATATGAAGATCCGCTGCAAGGTGATCCTCA CGAGGGGCATGACTTCTATTCAACCGGATCTACTATAACTGGTGACGGGGATGATCCCGAGTTTGTAAGCATGGCAGCGA GGTTAGGTATTTATATCGCCCCTCACGTTAAGCAGACCTCATTAAACGTAAAATTAGCTACTGCTGTTCTACGTCATGCC TACGTGCTGTGCACAACAATAGGCTTTGAATCAGACGATTTGGAAAATACCTTTGGTAACTACTGCGTAAAGATCGAAGA TGTAGAGGGATTTTTCAATGCTGTTACTAGGTGTCTTTGCGTTCAGCTAGGCAGCTTGCGTGCTGGGCACCGGAGCATAA TTTATAAGGAGCGATTTACAACCGGAATGCAACCGATGCCAGGCCCTATAGGCTTTGTGAAGCCTCCGGATAAATATGCA AGCCAGTGCGAATACCGATTCCTTTGGTTTAAAGACCCAGAGGAAGATGCCCAGCCTTTAGTAATTCACTGCCCGGAAGC TGCTAAATATGTGACGCGCGTGAAGTAA
Upstream 100 bases:
>100_bases GGATTGAAGCCAAGGCTGTACTGGGTTTTAAAATCGAAGGGGTGTTTCTTCTGGTGAGCGGACATAGTTCATCCTCGCCG GGGTGGCGTGAGTCGTTGAA
Downstream 100 bases:
>100_bases AACAGTCTTGGGATTTGGCTATTTCAGGCCGCCGCCCGCCTGGCGTGGTGTTCAGCGCAATAGGTAAGGGTGGGTGTTAA GGGTGGTTGTCCGCGCCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 275; Mature: 274
Protein sequence:
>275_residues MGYWCASRYLAEKEVQMGRKGQWWNTKAKALSGRKHVEKAGVKHKASNKNKLIGNVDFSESIASRVQSVYRYFDDEKFAD AFVQGAIYISTLEKCRQYEDPLQGDPHEGHDFYSTGSTITGDGDDPEFVSMAARLGIYIAPHVKQTSLNVKLATAVLRHA YVLCTTIGFESDDLENTFGNYCVKIEDVEGFFNAVTRCLCVQLGSLRAGHRSIIYKERFTTGMQPMPGPIGFVKPPDKYA SQCEYRFLWFKDPEEDAQPLVIHCPEAAKYVTRVK
Sequences:
>Translated_275_residues MGYWCASRYLAEKEVQMGRKGQWWNTKAKALSGRKHVEKAGVKHKASNKNKLIGNVDFSESIASRVQSVYRYFDDEKFAD AFVQGAIYISTLEKCRQYEDPLQGDPHEGHDFYSTGSTITGDGDDPEFVSMAARLGIYIAPHVKQTSLNVKLATAVLRHA YVLCTTIGFESDDLENTFGNYCVKIEDVEGFFNAVTRCLCVQLGSLRAGHRSIIYKERFTTGMQPMPGPIGFVKPPDKYA SQCEYRFLWFKDPEEDAQPLVIHCPEAAKYVTRVK >Mature_274_residues GYWCASRYLAEKEVQMGRKGQWWNTKAKALSGRKHVEKAGVKHKASNKNKLIGNVDFSESIASRVQSVYRYFDDEKFADA FVQGAIYISTLEKCRQYEDPLQGDPHEGHDFYSTGSTITGDGDDPEFVSMAARLGIYIAPHVKQTSLNVKLATAVLRHAY VLCTTIGFESDDLENTFGNYCVKIEDVEGFFNAVTRCLCVQLGSLRAGHRSIIYKERFTTGMQPMPGPIGFVKPPDKYAS QCEYRFLWFKDPEEDAQPLVIHCPEAAKYVTRVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31052; Mature: 30921
Theoretical pI: Translated: 7.75; Mature: 7.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGYWCASRYLAEKEVQMGRKGQWWNTKAKALSGRKHVEKAGVKHKASNKNKLIGNVDFSE CCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCHHHHHHHCCCCCCCCCCCEEECCCHHH SIASRVQSVYRYFDDEKFADAFVQGAIYISTLEKCRQYEDPLQGDPHEGHDFYSTGSTIT HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCEEE GDGDDPEFVSMAARLGIYIAPHVKQTSLNVKLATAVLRHAYVLCTTIGFESDDLENTFGN CCCCCHHHHHHHHHHCEEECCCCEECCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCC YCVKIEDVEGFFNAVTRCLCVQLGSLRAGHRSIIYKERFTTGMQPMPGPIGFVKPPDKYA EEEEEECHHHHHHHHHHHHHHHHHCCCCCCHHHEEHHHHCCCCCCCCCCCCCCCCCHHHH SQCEYRFLWFKDPEEDAQPLVIHCPEAAKYVTRVK CCCCEEEEEEECCCCCCCCEEEECCHHHHHHHCCC >Mature Secondary Structure GYWCASRYLAEKEVQMGRKGQWWNTKAKALSGRKHVEKAGVKHKASNKNKLIGNVDFSE CCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCHHHHHHHCCCCCCCCCCCEEECCCHHH SIASRVQSVYRYFDDEKFADAFVQGAIYISTLEKCRQYEDPLQGDPHEGHDFYSTGSTIT HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCEEE GDGDDPEFVSMAARLGIYIAPHVKQTSLNVKLATAVLRHAYVLCTTIGFESDDLENTFGN CCCCCHHHHHHHHHHCEEECCCCEECCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCC YCVKIEDVEGFFNAVTRCLCVQLGSLRAGHRSIIYKERFTTGMQPMPGPIGFVKPPDKYA EEEEEECHHHHHHHHHHHHHHHHHCCCCCCHHHEEHHHHCCCCCCCCCCCCCCCCCHHHH SQCEYRFLWFKDPEEDAQPLVIHCPEAAKYVTRVK CCCCEEEEEEECCCCCCCCEEEECCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA