| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66046062
Identifier: 66046062
GI number: 66046062
Start: 3400133
End: 3400780
Strand: Reverse
Name: 66046062
Synonym: Psyr_2826
Alternate gene names: NA
Gene position: 3400780-3400133 (Counterclockwise)
Preceding gene: 66046072
Following gene: 66046060
Centisome position: 55.81
GC content: 45.06
Gene sequence:
>648_bases ATGCGTTGCTATCACTTCCTCAACAAAAAATACGGACTCGAAGCTCTCGAAAAAAACAGGTTGAAAGTTTCCACTTTTGA CTCGGTAAATGATCCCTTTGAGCTGTTCTGTCACTCTCTAGATAATCGTGAACTTCGTAAACGCATGGGGTCATTCAAAA AGTCTACGGCTGCCGAAGCTGGCATGATCTGTTTTAGTCGAGCAATGAGCAGCCCGGTTCAGTGGGCACACTACGCAGGT AGGCACAACGGAATATGCTTGGGATTTGATATTCCCGACAAGTTCGTTACAGCTGTAAACTATGTCTCCGAGCGTCTCGA CTTCAGACCAGATCGTCCTTGGGACTCAGAGAAAGTAGACCAGAGGGTCGAGGAGGCATTTCTCACGAAATTTGACCACT GGAGATACGAAGAGGAAGTTCGTTTGTTCGGCTCTCTAGGAAAACCCGATCCAGAGTCAGGTCTTTATTTTGAGTCATTT AGCGACAGCATCTGCCTTGCTGAAGTCGTAGTTGGTTTTGCTTCAGATATCAGTCGCAAGGAAATACAAGATATTTTGGG CCACAACTTATCTAAGATCGAGTGCTATAAAGTAAGACCGGCATTCAAATCTTTCGCAATGGTTAGAAACCGTGATGGAA AATGGTGA
Upstream 100 bases:
>100_bases TTTGTAGGGAGACATGGAGATTCCTCGCCGGGGTGGCGTGAGCCGTTGAAGTGGGGTATTAGTCTGTAAAGGACAATATT TTTAGTCAGGAGAGTTTGAA
Downstream 100 bases:
>100_bases CAATCAGCTATCCCGCCCCGTGTACCGAGTCCCGAAACACGTCCATCTGAGCAGCGCCATCCAGCCAAGCTGCGTCTATC CGGGCGCGGGCGAGTGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MRCYHFLNKKYGLEALEKNRLKVSTFDSVNDPFELFCHSLDNRELRKRMGSFKKSTAAEAGMICFSRAMSSPVQWAHYAG RHNGICLGFDIPDKFVTAVNYVSERLDFRPDRPWDSEKVDQRVEEAFLTKFDHWRYEEEVRLFGSLGKPDPESGLYFESF SDSICLAEVVVGFASDISRKEIQDILGHNLSKIECYKVRPAFKSFAMVRNRDGKW
Sequences:
>Translated_215_residues MRCYHFLNKKYGLEALEKNRLKVSTFDSVNDPFELFCHSLDNRELRKRMGSFKKSTAAEAGMICFSRAMSSPVQWAHYAG RHNGICLGFDIPDKFVTAVNYVSERLDFRPDRPWDSEKVDQRVEEAFLTKFDHWRYEEEVRLFGSLGKPDPESGLYFESF SDSICLAEVVVGFASDISRKEIQDILGHNLSKIECYKVRPAFKSFAMVRNRDGKW >Mature_215_residues MRCYHFLNKKYGLEALEKNRLKVSTFDSVNDPFELFCHSLDNRELRKRMGSFKKSTAAEAGMICFSRAMSSPVQWAHYAG RHNGICLGFDIPDKFVTAVNYVSERLDFRPDRPWDSEKVDQRVEEAFLTKFDHWRYEEEVRLFGSLGKPDPESGLYFESF SDSICLAEVVVGFASDISRKEIQDILGHNLSKIECYKVRPAFKSFAMVRNRDGKW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24978; Mature: 24978
Theoretical pI: Translated: 7.83; Mature: 7.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRCYHFLNKKYGLEALEKNRLKVSTFDSVNDPFELFCHSLDNRELRKRMGSFKKSTAAEA CCHHHHHHHHHCHHHHHHCCEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH GMICFSRAMSSPVQWAHYAGRHNGICLGFDIPDKFVTAVNYVSERLDFRPDRPWDSEKVD HHHHHHHHHCCCHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHH QRVEEAFLTKFDHWRYEEEVRLFGSLGKPDPESGLYFESFSDSICLAEVVVGFASDISRK HHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCEEHHCCCCHHHHHHHHHHHHHCCCHH EIQDILGHNLSKIECYKVRPAFKSFAMVRNRDGKW HHHHHHCCCCCCEEEEECCHHHHHHHHHHCCCCCC >Mature Secondary Structure MRCYHFLNKKYGLEALEKNRLKVSTFDSVNDPFELFCHSLDNRELRKRMGSFKKSTAAEA CCHHHHHHHHHCHHHHHHCCEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH GMICFSRAMSSPVQWAHYAGRHNGICLGFDIPDKFVTAVNYVSERLDFRPDRPWDSEKVD HHHHHHHHHCCCHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHH QRVEEAFLTKFDHWRYEEEVRLFGSLGKPDPESGLYFESFSDSICLAEVVVGFASDISRK HHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCEEHHCCCCHHHHHHHHHHHHHCCCHH EIQDILGHNLSKIECYKVRPAFKSFAMVRNRDGKW HHHHHHCCCCCCEEEEECCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA