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The map label for this gene is ninB [H]

Identifier: 66046043

GI number: 66046043

Start: 3384708

End: 3385106

Strand: Reverse

Name: ninB [H]

Synonym: Psyr_2807

Alternate gene names: 66046043

Gene position: 3385106-3384708 (Counterclockwise)

Preceding gene: 66046044

Following gene: 66046042

Centisome position: 55.55

GC content: 59.65

Gene sequence:

>399_bases
ATGACTGAGTTCGCTATTCGCAGTACTCGAGACCTCAATCGCCTATACGGCGCACTGCACGCCATCGACCTGACCAAGCC
GAAGGTAGTGGTCATCAAAGACGAGAAGCGTCCTGACGTCCTCAACCGCAAGATGTGGGCAATGCTCCGCGACGTATCCG
AGCAGGTTGAGTGGTACGGCAAGAAGCTCACTGATGAGGACTGGAAGTGCCTGTTCAGCGCCTCGGTCGAGAAGCAGCGT
GCAGAACCTGGGCTCGATGGCGGATTCGTCGTCATGGCCACCTCGACCCGTAAGCAGTCGGCCAAGTGGTTTAGCGATCT
GTTCGAGGTCATCCATGCGTTCGGCGCTGAGCGCGGCGTCCGCTGGACCGAGCCGGACAGGTGGGGAGGGCGTTACTGA

Upstream 100 bases:

>100_bases
GACGGAATGATCCGCACCTGGGAGCAACTCCGAACCCTGCTCAACACCACAACAGTTCTGCCCAATGGGCGAGGTGGGTA
TTCGTTCTTGGAGGCGCGCC

Downstream 100 bases:

>100_bases
TGCTCAAGACCATCAAGGAGCGCAAAAAGAAGACCTGCGACAATCCGGCATGCGGTATCCAGTTTGTGCCTGCTCAACTT
GGCCAGAAAGTCTGTGGCTG

Product: NinB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 131

Protein sequence:

>132_residues
MTEFAIRSTRDLNRLYGALHAIDLTKPKVVVIKDEKRPDVLNRKMWAMLRDVSEQVEWYGKKLTDEDWKCLFSASVEKQR
AEPGLDGGFVVMATSTRKQSAKWFSDLFEVIHAFGAERGVRWTEPDRWGGRY

Sequences:

>Translated_132_residues
MTEFAIRSTRDLNRLYGALHAIDLTKPKVVVIKDEKRPDVLNRKMWAMLRDVSEQVEWYGKKLTDEDWKCLFSASVEKQR
AEPGLDGGFVVMATSTRKQSAKWFSDLFEVIHAFGAERGVRWTEPDRWGGRY
>Mature_131_residues
TEFAIRSTRDLNRLYGALHAIDLTKPKVVVIKDEKRPDVLNRKMWAMLRDVSEQVEWYGKKLTDEDWKCLFSASVEKQRA
EPGLDGGFVVMATSTRKQSAKWFSDLFEVIHAFGAERGVRWTEPDRWGGRY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ninB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008711 [H]

Pfam domain/function: PF05772 NinB [H]

EC number: NA

Molecular weight: Translated: 15354; Mature: 15222

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEFAIRSTRDLNRLYGALHAIDLTKPKVVVIKDEKRPDVLNRKMWAMLRDVSEQVEWYG
CCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
KKLTDEDWKCLFSASVEKQRAEPGLDGGFVVMATSTRKQSAKWFSDLFEVIHAFGAERGV
CCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCC
RWTEPDRWGGRY
CCCCCCCCCCCC
>Mature Secondary Structure 
TEFAIRSTRDLNRLYGALHAIDLTKPKVVVIKDEKRPDVLNRKMWAMLRDVSEQVEWYG
CCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
KKLTDEDWKCLFSASVEKQRAEPGLDGGFVVMATSTRKQSAKWFSDLFEVIHAFGAERGV
CCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCC
RWTEPDRWGGRY
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]