| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66046037
Identifier: 66046037
GI number: 66046037
Start: 3381700
End: 3382149
Strand: Direct
Name: 66046037
Synonym: Psyr_2801
Alternate gene names: NA
Gene position: 3381700-3382149 (Clockwise)
Preceding gene: 66046035
Following gene: 66046040
Centisome position: 55.5
GC content: 51.78
Gene sequence:
>450_bases ATGCCGTTTACACGCACCCGCATCACTGCAGTATCAATCCTCGCATCTTTGGTTCTCAGCGGCTGCGCCACGCAACCTCA GGAAACGTGGACAAACCAAGGCCCTTCCAAGATCGTCACTGAAAATGGGCGATATGTCTGCTATACAGATGCGCAGATCG TTGACGGCAAACGTACGCGCTTCAATTTATGCGCGACTCCCTCGTCAGGGCTGATTAGTGCTAATGGGCCGCAGATTTGG GTAGGGGCTGGCTACCGGAGGCCATTCAAGTACCCCCTTAACGAAGCCATTAATGGAACCGTAGTGCCGCTTGAAGACGT GGATAACGTGCAGCTTAAATGCGAATCGTTGAAGAAGGTTGCTGGGGGCTCGACTCCCGAGACGTTCTGTAAGGTCACTC TTAAAGATAGAGTGCTCGTAAGCGCTCAGATAGTTTTCGAAGGAATGTAA
Upstream 100 bases:
>100_bases TGTGGAGCGCTACCGTGGTGCCAGAGTTTCTACGCAGCGCTTGAAATGATGGCCGTTAGCCGGTATTAGTGGCGACTTTT AAAGCAAGGTAGCTAACGTA
Downstream 100 bases:
>100_bases GGATGTCTGCGCGCCATGCTTTTTAGTTTGGCGCGTTAGGGCGTCTGCCGCTCTACCGCCTCGTTGACTTTATCGGCGGC CTTGCTGGCCACCTCTGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MPFTRTRITAVSILASLVLSGCATQPQETWTNQGPSKIVTENGRYVCYTDAQIVDGKRTRFNLCATPSSGLISANGPQIW VGAGYRRPFKYPLNEAINGTVVPLEDVDNVQLKCESLKKVAGGSTPETFCKVTLKDRVLVSAQIVFEGM
Sequences:
>Translated_149_residues MPFTRTRITAVSILASLVLSGCATQPQETWTNQGPSKIVTENGRYVCYTDAQIVDGKRTRFNLCATPSSGLISANGPQIW VGAGYRRPFKYPLNEAINGTVVPLEDVDNVQLKCESLKKVAGGSTPETFCKVTLKDRVLVSAQIVFEGM >Mature_148_residues PFTRTRITAVSILASLVLSGCATQPQETWTNQGPSKIVTENGRYVCYTDAQIVDGKRTRFNLCATPSSGLISANGPQIWV GAGYRRPFKYPLNEAINGTVVPLEDVDNVQLKCESLKKVAGGSTPETFCKVTLKDRVLVSAQIVFEGM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16200; Mature: 16069
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFTRTRITAVSILASLVLSGCATQPQETWTNQGPSKIVTENGRYVCYTDAQIVDGKRTR CCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCEEEECCCCEEEEECCEEECCCCCE FNLCATPSSGLISANGPQIWVGAGYRRPFKYPLNEAINGTVVPLEDVDNVQLKCESLKKV EEEEECCCCCEEECCCCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCEEEHHHHHHH AGGSTPETFCKVTLKDRVLVSAQIVFEGM HCCCCCCCEEEEEECCCEEEEEEEEEECC >Mature Secondary Structure PFTRTRITAVSILASLVLSGCATQPQETWTNQGPSKIVTENGRYVCYTDAQIVDGKRTR CCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCEEEECCCCEEEEECCEEECCCCCE FNLCATPSSGLISANGPQIWVGAGYRRPFKYPLNEAINGTVVPLEDVDNVQLKCESLKKV EEEEECCCCCEEECCCCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCEEEHHHHHHH AGGSTPETFCKVTLKDRVLVSAQIVFEGM HCCCCCCCEEEEEECCCEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA