| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66046032
Identifier: 66046032
GI number: 66046032
Start: 3379191
End: 3379814
Strand: Reverse
Name: 66046032
Synonym: Psyr_2796
Alternate gene names: NA
Gene position: 3379814-3379191 (Counterclockwise)
Preceding gene: 66046033
Following gene: 66046031
Centisome position: 55.46
GC content: 58.33
Gene sequence:
>624_bases ATGAACAGGCCAGCGCCCCCAGTTGAGTCGCTCAAGCTGTCTGACGAGGCAGACGTCTTCATGCGCCTGGTGCCAGCCAA GGAGGTATGGGGATGGATTCAAAACGAGATCATTGCCGACACCGGCAGCATTCACAATGAAGACCACGCCCATCTGATCG ATGCCGACATCTGCATCATGTGGGCCTCATCTGCATTCACAAAACAGGGTCGCACAGTGCTGGGGCAGGCTGAGCACGTC GCCTTCCGCGCAGGCGGTTGGCAGAAGGCCCGCATGGAACAGCAGATGCGTGACTGGTTCGGCTACGTACCGAGCTACAT CATCACCTTGGCCGCCGATTACTGCTCACAGTGCAGCGATGCAGACTTCTGCGCACTGGTTGAGCATGAGCTCTACCACA TCGCCCAGGCAACCGATCAGTACGGCGCACCCAAGTTCACGCAAGACGGATTACCGAAGCTTGAGATGCGCGGCCACGAC GTCGAGGAGTTCGTTGGTGTGGTGCGTCGCTATGGGGCAAGCCCAGACGTCCAGCTGCTGGTCGACGCTGCAAACAAGCC TGCTGAGGTAGGTAAATTGAATATATCGAGGGCCTGCGGAACCTGTCTGCTCAAGTCGGCCTGA
Upstream 100 bases:
>100_bases GCTCTCTACGCTATCGCTAAAGACCCTGGTTACGCTCCCACAGCAACACCCACTACCTGACAGGTTAGTCAATGATTAAG CAACTCTACTGGGAGGCAGC
Downstream 100 bases:
>100_bases AATTTGACAGGCATTAGACGGAATCCAACCTATGGCAGCCCTGAAGCATGAGGTGAAGAGCTTCATCGTTCAGGCGTTGG CTTGCTTCGACACTCCCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MNRPAPPVESLKLSDEADVFMRLVPAKEVWGWIQNEIIADTGSIHNEDHAHLIDADICIMWASSAFTKQGRTVLGQAEHV AFRAGGWQKARMEQQMRDWFGYVPSYIITLAADYCSQCSDADFCALVEHELYHIAQATDQYGAPKFTQDGLPKLEMRGHD VEEFVGVVRRYGASPDVQLLVDAANKPAEVGKLNISRACGTCLLKSA
Sequences:
>Translated_207_residues MNRPAPPVESLKLSDEADVFMRLVPAKEVWGWIQNEIIADTGSIHNEDHAHLIDADICIMWASSAFTKQGRTVLGQAEHV AFRAGGWQKARMEQQMRDWFGYVPSYIITLAADYCSQCSDADFCALVEHELYHIAQATDQYGAPKFTQDGLPKLEMRGHD VEEFVGVVRRYGASPDVQLLVDAANKPAEVGKLNISRACGTCLLKSA >Mature_207_residues MNRPAPPVESLKLSDEADVFMRLVPAKEVWGWIQNEIIADTGSIHNEDHAHLIDADICIMWASSAFTKQGRTVLGQAEHV AFRAGGWQKARMEQQMRDWFGYVPSYIITLAADYCSQCSDADFCALVEHELYHIAQATDQYGAPKFTQDGLPKLEMRGHD VEEFVGVVRRYGASPDVQLLVDAANKPAEVGKLNISRACGTCLLKSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22969; Mature: 22969
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRPAPPVESLKLSDEADVFMRLVPAKEVWGWIQNEIIADTGSIHNEDHAHLIDADICIM CCCCCCCHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCEEECHHHHEE WASSAFTKQGRTVLGQAEHVAFRAGGWQKARMEQQMRDWFGYVPSYIITLAADYCSQCSD ECCHHHHHCCCCHHCCHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC ADFCALVEHELYHIAQATDQYGAPKFTQDGLPKLEMRGHDVEEFVGVVRRYGASPDVQLL CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEE VDAANKPAEVGKLNISRACGTCLLKSA EECCCCCHHHCCCCHHHHHHHHHHCCC >Mature Secondary Structure MNRPAPPVESLKLSDEADVFMRLVPAKEVWGWIQNEIIADTGSIHNEDHAHLIDADICIM CCCCCCCHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCEEECHHHHEE WASSAFTKQGRTVLGQAEHVAFRAGGWQKARMEQQMRDWFGYVPSYIITLAADYCSQCSD ECCHHHHHCCCCHHCCHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC ADFCALVEHELYHIAQATDQYGAPKFTQDGLPKLEMRGHDVEEFVGVVRRYGASPDVQLL CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEE VDAANKPAEVGKLNISRACGTCLLKSA EECCCCCHHHCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA