| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66046029
Identifier: 66046029
GI number: 66046029
Start: 3375992
End: 3377413
Strand: Reverse
Name: 66046029
Synonym: Psyr_2793
Alternate gene names: NA
Gene position: 3377413-3375992 (Counterclockwise)
Preceding gene: 66046030
Following gene: 66046028
Centisome position: 55.42
GC content: 59.35
Gene sequence:
>1422_bases ATGAACAACGACGTTTCCTTCAAACGGCCCGAATACATCGAGGCGTTGGATCGCTGGCTGACTGTGCGCGACGTCTGTGC TGGCCAGCACCGTGTTGTTGACCGCCTGCCTTACATCAACCGGCACGACAAGTCAGAAGAGAACGTCGAGCGCAACAATG CGTACCGCGAGCGCGCGGTGTTCAAGAACGCCACCGGCCACACCCGAAACGGGCTGATTGGTTTGGCGTTCCACAAAGAC CCCACGCTGACGGTTCCCAAGAACCTTGAGTACCTGCAGGACAATGCCAACGGCGCAGGCGTGAGCATCTATCAGCAGTC GCAGGGCTCCCTTGAGAAGGTCTTGGAGGCCGGTCGTCATGGTCTTTTCGTGGACTTTCACGAAGACAGCGGTATCGGCG GGCATTCGGTCATCCTCACTTACACGGCTGAAGACGTCATCAACTGGCGCACCGGCATGGTGGACGGCCACAACGTCCTG ATCATGGTCGTCCTGCGTGAGATGAACGAAGAGCCAGATGGGTTTGGGCTGAAGTGCACGGAGCAGTTTCGCGAGCTGGC CCTGGACGAGGCTGGACTGTACGTCTGTCGCGTCTGGCGTCGTAAAGGCCCGCGCGGCGGTGGCCCTCTTGAGGTGGTTG AGGAGTACATGCCAAAGGGGAAGGGCGGACGTATCAAGGAGATCCCTTTCACGTTCATCGGCGCCCAGAACAACGACCCA AGCATTGACGAGTCGCCGCTTTACGACATCGCGATGATCAACCTCGGGCATTACCGGAACAGCGCGGACTACGAAGACAG CGTGTTCTGGTGTGGCCAGGCTCAGCCTTGGATCAGCGGCGTGGATGACCAATGGCTTGAGATGGCCCGCAAAGAAGGCG TTTACGTAGGCTCCCGGGCGCCGATCCCTGTGCCGGCTGGCGAAACCTTCGCCTTTGCTCAACCCCAGCCCAATACGCTG GTGAAAGAGGCGATGGCCGACAAGAACCAGATGATGATCGAGCTGGGCGCGCGCATGGTTGTGTCGTCCATAACGGCCAA AACAGCTACCGAGTCGAGAGGCGACCAGTCGGCGTCCACGTCGGTGCTCGCAATCTGCGTATCCAACGTGAACGAGGCCT ACACCCGGGCGCTGGGTTGGTGCGCTCAGTTCCTGGGAGTCACCGGCAAGACGGCTTATCTGGTGAATCAAGAGTTCGTC GAGCTCAGTGCTGACCCTCAGATGATCACCGCGCTTGTGCAGCTATGGCAGAGCGGTGGCTTCGCTAAGGCCGATCTGCG CGGATACCTGCGCAAGTTGGGACTGATCGCACCGGAGCGAACCGACAAGCAGATAGACGGAGAGCTTCAGGAACAGACCG ACAACCTCGGCCTGGATGATGACGAGGACTTAAACGATGGCCGTCAACCAAGCGGTACTTGA
Upstream 100 bases:
>100_bases CACAAGGCAACGACCACGCGAACGATGGCGGCGGTTATTTCATCCATCGCGAGTACCCGATCATAAAACCGGTCACCTCT CTAAACCTGGGATACGCCCG
Downstream 100 bases:
>100_bases TGCCACGATTCGGCACTCGGTGTTCCTGGAGCAACTGAAGGCTGGTGAGGTCGAGAAATTCGCTCCTTTCCTCAAAGAGA TCGACCGGGCGGTGCGCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 473; Mature: 473
Protein sequence:
>473_residues MNNDVSFKRPEYIEALDRWLTVRDVCAGQHRVVDRLPYINRHDKSEENVERNNAYRERAVFKNATGHTRNGLIGLAFHKD PTLTVPKNLEYLQDNANGAGVSIYQQSQGSLEKVLEAGRHGLFVDFHEDSGIGGHSVILTYTAEDVINWRTGMVDGHNVL IMVVLREMNEEPDGFGLKCTEQFRELALDEAGLYVCRVWRRKGPRGGGPLEVVEEYMPKGKGGRIKEIPFTFIGAQNNDP SIDESPLYDIAMINLGHYRNSADYEDSVFWCGQAQPWISGVDDQWLEMARKEGVYVGSRAPIPVPAGETFAFAQPQPNTL VKEAMADKNQMMIELGARMVVSSITAKTATESRGDQSASTSVLAICVSNVNEAYTRALGWCAQFLGVTGKTAYLVNQEFV ELSADPQMITALVQLWQSGGFAKADLRGYLRKLGLIAPERTDKQIDGELQEQTDNLGLDDDEDLNDGRQPSGT
Sequences:
>Translated_473_residues MNNDVSFKRPEYIEALDRWLTVRDVCAGQHRVVDRLPYINRHDKSEENVERNNAYRERAVFKNATGHTRNGLIGLAFHKD PTLTVPKNLEYLQDNANGAGVSIYQQSQGSLEKVLEAGRHGLFVDFHEDSGIGGHSVILTYTAEDVINWRTGMVDGHNVL IMVVLREMNEEPDGFGLKCTEQFRELALDEAGLYVCRVWRRKGPRGGGPLEVVEEYMPKGKGGRIKEIPFTFIGAQNNDP SIDESPLYDIAMINLGHYRNSADYEDSVFWCGQAQPWISGVDDQWLEMARKEGVYVGSRAPIPVPAGETFAFAQPQPNTL VKEAMADKNQMMIELGARMVVSSITAKTATESRGDQSASTSVLAICVSNVNEAYTRALGWCAQFLGVTGKTAYLVNQEFV ELSADPQMITALVQLWQSGGFAKADLRGYLRKLGLIAPERTDKQIDGELQEQTDNLGLDDDEDLNDGRQPSGT >Mature_473_residues MNNDVSFKRPEYIEALDRWLTVRDVCAGQHRVVDRLPYINRHDKSEENVERNNAYRERAVFKNATGHTRNGLIGLAFHKD PTLTVPKNLEYLQDNANGAGVSIYQQSQGSLEKVLEAGRHGLFVDFHEDSGIGGHSVILTYTAEDVINWRTGMVDGHNVL IMVVLREMNEEPDGFGLKCTEQFRELALDEAGLYVCRVWRRKGPRGGGPLEVVEEYMPKGKGGRIKEIPFTFIGAQNNDP SIDESPLYDIAMINLGHYRNSADYEDSVFWCGQAQPWISGVDDQWLEMARKEGVYVGSRAPIPVPAGETFAFAQPQPNTL VKEAMADKNQMMIELGARMVVSSITAKTATESRGDQSASTSVLAICVSNVNEAYTRALGWCAQFLGVTGKTAYLVNQEFV ELSADPQMITALVQLWQSGGFAKADLRGYLRKLGLIAPERTDKQIDGELQEQTDNLGLDDDEDLNDGRQPSGT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52569; Mature: 52569
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNDVSFKRPEYIEALDRWLTVRDVCAGQHRVVDRLPYINRHDKSEENVERNNAYRERAV CCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH FKNATGHTRNGLIGLAFHKDPTLTVPKNLEYLQDNANGAGVSIYQQSQGSLEKVLEAGRH HHCCCCCCCCCEEEEEEECCCCEECCCCHHHHHCCCCCCCEEEEECCCCHHHHHHHCCCC GLFVDFHEDSGIGGHSVILTYTAEDVINWRTGMVDGHNVLIMVVLREMNEEPDGFGLKCT CEEEEEECCCCCCCCEEEEEEEHHHHHHHHCCCCCCCCCEEEEEHHHHCCCCCCCCCCHH EQFRELALDEAGLYVCRVWRRKGPRGGGPLEVVEEYMPKGKGGRIKEIPFTFIGAQNNDP HHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCEEECCEEEEECCCCCC SIDESPLYDIAMINLGHYRNSADYEDSVFWCGQAQPWISGVDDQWLEMARKEGVYVGSRA CCCCCCCEEEEEEEECCCCCCCCCCCCEEECCCCCHHHCCCCHHHHHHHHHCCEEECCCC PIPVPAGETFAFAQPQPNTLVKEAMADKNQMMIELGARMVVSSITAKTATESRGDQSAST CCCCCCCCCEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH SVLAICVSNVNEAYTRALGWCAQFLGVTGKTAYLVNQEFVELSADPQMITALVQLWQSGG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHCCCCHHHHHHHHHHHHCCC FAKADLRGYLRKLGLIAPERTDKQIDGELQEQTDNLGLDDDEDLNDGRQPSGT CCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNNDVSFKRPEYIEALDRWLTVRDVCAGQHRVVDRLPYINRHDKSEENVERNNAYRERAV CCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH FKNATGHTRNGLIGLAFHKDPTLTVPKNLEYLQDNANGAGVSIYQQSQGSLEKVLEAGRH HHCCCCCCCCCEEEEEEECCCCEECCCCHHHHHCCCCCCCEEEEECCCCHHHHHHHCCCC GLFVDFHEDSGIGGHSVILTYTAEDVINWRTGMVDGHNVLIMVVLREMNEEPDGFGLKCT CEEEEEECCCCCCCCEEEEEEEHHHHHHHHCCCCCCCCCEEEEEHHHHCCCCCCCCCCHH EQFRELALDEAGLYVCRVWRRKGPRGGGPLEVVEEYMPKGKGGRIKEIPFTFIGAQNNDP HHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCEEECCEEEEECCCCCC SIDESPLYDIAMINLGHYRNSADYEDSVFWCGQAQPWISGVDDQWLEMARKEGVYVGSRA CCCCCCCEEEEEEEECCCCCCCCCCCCEEECCCCCHHHCCCCHHHHHHHHHCCEEECCCC PIPVPAGETFAFAQPQPNTLVKEAMADKNQMMIELGARMVVSSITAKTATESRGDQSAST CCCCCCCCCEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH SVLAICVSNVNEAYTRALGWCAQFLGVTGKTAYLVNQEFVELSADPQMITALVQLWQSGG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHCCCCHHHHHHHHHHHHCCC FAKADLRGYLRKLGLIAPERTDKQIDGELQEQTDNLGLDDDEDLNDGRQPSGT CCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA