Definition Pseudomonas syringae pv. syringae B728a, complete genome.
Accession NC_007005
Length 6,093,698

Click here to switch to the map view.

The map label for this gene is 66046024

Identifier: 66046024

GI number: 66046024

Start: 3372178

End: 3372627

Strand: Reverse

Name: 66046024

Synonym: Psyr_2788

Alternate gene names: NA

Gene position: 3372627-3372178 (Counterclockwise)

Preceding gene: 66046025

Following gene: 66046023

Centisome position: 55.35

GC content: 57.11

Gene sequence:

>450_bases
ATGGCCGCCAGGGAGAACATCATGGAACTCGTTTACAGCAACCAGCGCGGCGACTTCGATCCCAGCAAGCGCTATCGCAA
CCCGGATCTGTTCCGGAACGTCGAGCGCGGCGTGACCAAGGTCACCGTGGTTGGCGATTACCCGGAAATCGTCGATGCCT
ACAAGGCGGTCGAGATTGACGTGGAGATCGAGACACGCAAGACGCCGGTGAAAGGCAAGGCCAAGGCCGCTGACAAAACT
CCTGCAAAGCCGGGTAAAGGCCCAACCAAGCCTGAGTCCAACGGAACCCAGAAGGATGGCACCAAGGAAGAACCGGTCTA
CATCCCCAAGCTGGAAGCAGATAACCAGTGGATCATCATCACCCGCGACGGTGTACGATTCAGCGACTTTGCTGGTGATG
AAGCTCAGGCCAAGGCCGAAGCAGATCGCCTGAACGAAACCAAGGAATAA

Upstream 100 bases:

>100_bases
CGCCAACTGGGTCAAGCACTCTGCCAGCGACAAGGTCACTGCAGGCGTGATGATCGAACTCACTCCGGCTGCCTAAGCCA
TCCGACAGGTGCGGTCAGAA

Downstream 100 bases:

>100_bases
GTCATGCTCATCATCGAGGACGGCACCGGCGTACCGGGTGCTGAAAGCTACGCCACTGCCGCTGAACTGGTCATTTACGC
CGGGAAATTCGGCGTGGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 149; Mature: 148

Protein sequence:

>149_residues
MAARENIMELVYSNQRGDFDPSKRYRNPDLFRNVERGVTKVTVVGDYPEIVDAYKAVEIDVEIETRKTPVKGKAKAADKT
PAKPGKGPTKPESNGTQKDGTKEEPVYIPKLEADNQWIIITRDGVRFSDFAGDEAQAKAEADRLNETKE

Sequences:

>Translated_149_residues
MAARENIMELVYSNQRGDFDPSKRYRNPDLFRNVERGVTKVTVVGDYPEIVDAYKAVEIDVEIETRKTPVKGKAKAADKT
PAKPGKGPTKPESNGTQKDGTKEEPVYIPKLEADNQWIIITRDGVRFSDFAGDEAQAKAEADRLNETKE
>Mature_148_residues
AARENIMELVYSNQRGDFDPSKRYRNPDLFRNVERGVTKVTVVGDYPEIVDAYKAVEIDVEIETRKTPVKGKAKAADKTP
AKPGKGPTKPESNGTQKDGTKEEPVYIPKLEADNQWIIITRDGVRFSDFAGDEAQAKAEADRLNETKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16672; Mature: 16541

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAARENIMELVYSNQRGDFDPSKRYRNPDLFRNVERGVTKVTVVGDYPEIVDAYKAVEID
CCCHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHCCCEEEEEECCCHHHHHHHHEEEEE
VEIETRKTPVKGKAKAADKTPAKPGKGPTKPESNGTQKDGTKEEPVYIPKLEADNQWIII
EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEE
TRDGVRFSDFAGDEAQAKAEADRLNETKE
EECCCEECCCCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AARENIMELVYSNQRGDFDPSKRYRNPDLFRNVERGVTKVTVVGDYPEIVDAYKAVEID
CCHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHCCCEEEEEECCCHHHHHHHHEEEEE
VEIETRKTPVKGKAKAADKTPAKPGKGPTKPESNGTQKDGTKEEPVYIPKLEADNQWIII
EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEE
TRDGVRFSDFAGDEAQAKAEADRLNETKE
EECCCEECCCCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA