| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66046021
Identifier: 66046021
GI number: 66046021
Start: 3370321
End: 3370977
Strand: Reverse
Name: 66046021
Synonym: Psyr_2785
Alternate gene names: NA
Gene position: 3370977-3370321 (Counterclockwise)
Preceding gene: 66046022
Following gene: 66046020
Centisome position: 55.32
GC content: 59.36
Gene sequence:
>657_bases ATGAGCCGCGCAGGCGCTGGTCAGTCCGGTAGCTTCGCTCTCGACCTCGCCAGATTTGCCGAGCAGGCGAAGGAAGCGGT TGATGTCAGCCTTCGCGAGATAATCATCGAGATCGGCAGCAGCGTCATCCGGATGTCTCCAGTGGGCAATCCTGAGATAT GGGCGGCCAACCTGGCGTTTCGTGATGCCAACACCCGCGCAGCCGACGAATACGACTTCAAGGTTTCCCTGCGCAATACG GTCATCAACCTGACAGAGTCGAACTTCACGAAGTCCGGCAAGCTGAAGCGAGGCGTGAAATACGCCAAGCCGTTGACCAA GACCGAGCGTGTCCAGAACTTCAACGTCAACGGACTCGTAGCTGGCCAGGATTACGTCGGTGGCCGGTTCCGTGGCAACT GGATGTTCGGGATTGGCGCGCCAGATGGCACGACTACAGAAGAGGTCGACCCGACTGGCAGCAAGTCCACGGCGCGCATC GTCAACGGTGTGCTGGAATTCCACGCCGGCGACGTCGCCTACATCACCAACAGCCTGCCGTACGCCATCCCGCTGGAATT TGGGCATTCGACCCAGGCACCGGGCGGTATGGTTCGAATCACCGTGGCGCGCTTCCAGCAGATTGTTGAGGCTGCCATCA GGAATCATCAGGTATGA
Upstream 100 bases:
>100_bases GCAAGGTGGTGGTCCAGGGTCGCACCTGGTCGATCATTCCACCGCTGAAAGAGATCAACCCGGCAGGCACGCCACTGCTC TACGAGCTGCAGGTGCGCTC
Downstream 100 bases:
>100_bases GCCACAAAATAATCCGCTCACTGTTCGAGCAGAGACTCACGACGTGGGCAGGTGGGCGCAACCTGAGGATCGCCTATCAG GGCGTCAGCTTCACACCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 218; Mature: 217
Protein sequence:
>218_residues MSRAGAGQSGSFALDLARFAEQAKEAVDVSLREIIIEIGSSVIRMSPVGNPEIWAANLAFRDANTRAADEYDFKVSLRNT VINLTESNFTKSGKLKRGVKYAKPLTKTERVQNFNVNGLVAGQDYVGGRFRGNWMFGIGAPDGTTTEEVDPTGSKSTARI VNGVLEFHAGDVAYITNSLPYAIPLEFGHSTQAPGGMVRITVARFQQIVEAAIRNHQV
Sequences:
>Translated_218_residues MSRAGAGQSGSFALDLARFAEQAKEAVDVSLREIIIEIGSSVIRMSPVGNPEIWAANLAFRDANTRAADEYDFKVSLRNT VINLTESNFTKSGKLKRGVKYAKPLTKTERVQNFNVNGLVAGQDYVGGRFRGNWMFGIGAPDGTTTEEVDPTGSKSTARI VNGVLEFHAGDVAYITNSLPYAIPLEFGHSTQAPGGMVRITVARFQQIVEAAIRNHQV >Mature_217_residues SRAGAGQSGSFALDLARFAEQAKEAVDVSLREIIIEIGSSVIRMSPVGNPEIWAANLAFRDANTRAADEYDFKVSLRNTV INLTESNFTKSGKLKRGVKYAKPLTKTERVQNFNVNGLVAGQDYVGGRFRGNWMFGIGAPDGTTTEEVDPTGSKSTARIV NGVLEFHAGDVAYITNSLPYAIPLEFGHSTQAPGGMVRITVARFQQIVEAAIRNHQV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23622; Mature: 23491
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRAGAGQSGSFALDLARFAEQAKEAVDVSLREIIIEIGSSVIRMSPVGNPEIWAANLAF CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEEEE RDANTRAADEYDFKVSLRNTVINLTESNFTKSGKLKRGVKYAKPLTKTERVQNFNVNGLV ECCCCCCCCCCEEEEEECCEEEEECCCCCCCCCCHHHCCHHHCCCCHHHHHHCCCCCEEE AGQDYVGGRFRGNWMFGIGAPDGTTTEEVDPTGSKSTARIVNGVLEFHAGDVAYITNSLP ECCCCCCCEEECCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCC YAIPLEFGHSTQAPGGMVRITVARFQQIVEAAIRNHQV EEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCC >Mature Secondary Structure SRAGAGQSGSFALDLARFAEQAKEAVDVSLREIIIEIGSSVIRMSPVGNPEIWAANLAF CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEEEE RDANTRAADEYDFKVSLRNTVINLTESNFTKSGKLKRGVKYAKPLTKTERVQNFNVNGLV ECCCCCCCCCCEEEEEECCEEEEECCCCCCCCCCHHHCCHHHCCCCHHHHHHCCCCCEEE AGQDYVGGRFRGNWMFGIGAPDGTTTEEVDPTGSKSTARIVNGVLEFHAGDVAYITNSLP ECCCCCCCEEECCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCC YAIPLEFGHSTQAPGGMVRITVARFQQIVEAAIRNHQV EEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA