| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66046019
Identifier: 66046019
GI number: 66046019
Start: 3369186
End: 3369842
Strand: Reverse
Name: 66046019
Synonym: Psyr_2783
Alternate gene names: NA
Gene position: 3369842-3369186 (Counterclockwise)
Preceding gene: 66046020
Following gene: 66046018
Centisome position: 55.3
GC content: 59.36
Gene sequence:
>657_bases ATGGGCTTCAGACTCCCCAACGGCGCAACCCTTCAGATCGCCTCCGCCTATGGCGCGGCAATCCCGGTAACTGCACTGAG CAATGCAAATCCGGCTGTTGCCACCGCCGCTGCGCACGGCCTGGCTGACGGTGACATCATCGCCGTAACGTCGGGCTGGA CTCGCCTGAATGATCGCGCCACTCGCGTTTCCAAAAGCCTGAGCGGGACGTTTGCGCTGGAAAACATCAACACCACCAAT CTGCAGCCATACCCGGCTGGTTCAGGCACCGGCTCAGTGCGCAAGGTGACCAGCTTTGTCGAGGTGCCTCAAATCACCGA GGTAAACACCAGTGGTGGTGACCAGCAGTTTCTGACCTTTGGCTTCCTCGCCGACGACGATGATCGTCAGATGCCAACCA CCAAAAACCCGATCAGCATGTCTTTTACCGTGGCGGACGATCCAGACCTTCCCTATGTGGCTGTGGTGGAGGCTGCCGAT GATGACAAGCAGGCCCGCGTGCTTCGTTTGAACCTGCCAGGCGGCAGCAGCATCGTTTACAACGCTTACGTGTCCATCAC CACGACGCCGACGCTGGGCCGAAACAACCTGATGACCCGCGTGATGACCTTGTCACTGGCCGGTCGTCCAACCCGTTACT CGGCATTGGTGGCGTAA
Upstream 100 bases:
>100_bases CGTTTCAGTACCGCGCCGATACCAACTAATTCGCCCATTGGGCAAACCCAGAGCCCGCCATTGAGCGGGTTTTGTCATTT CTGCACAGAGGAAAACCAAC
Downstream 100 bases:
>100_bases CCCATGGCCAAGATCAAGATCGCCCAGAACCCGACGTTCAAAGCGCCGGTGATGATTCCCCGCATCGGCGAAGCCGCGGT GAAGGTGGAGTTCGAATTCA
Product: hypothetical protein
Products: NA
Alternate protein names: Tail Protein; Phage Associated Protein; Phage Tail Family; Phage Protein
Number of amino acids: Translated: 218; Mature: 217
Protein sequence:
>218_residues MGFRLPNGATLQIASAYGAAIPVTALSNANPAVATAAAHGLADGDIIAVTSGWTRLNDRATRVSKSLSGTFALENINTTN LQPYPAGSGTGSVRKVTSFVEVPQITEVNTSGGDQQFLTFGFLADDDDRQMPTTKNPISMSFTVADDPDLPYVAVVEAAD DDKQARVLRLNLPGGSSIVYNAYVSITTTPTLGRNNLMTRVMTLSLAGRPTRYSALVA
Sequences:
>Translated_218_residues MGFRLPNGATLQIASAYGAAIPVTALSNANPAVATAAAHGLADGDIIAVTSGWTRLNDRATRVSKSLSGTFALENINTTN LQPYPAGSGTGSVRKVTSFVEVPQITEVNTSGGDQQFLTFGFLADDDDRQMPTTKNPISMSFTVADDPDLPYVAVVEAAD DDKQARVLRLNLPGGSSIVYNAYVSITTTPTLGRNNLMTRVMTLSLAGRPTRYSALVA >Mature_217_residues GFRLPNGATLQIASAYGAAIPVTALSNANPAVATAAAHGLADGDIIAVTSGWTRLNDRATRVSKSLSGTFALENINTTNL QPYPAGSGTGSVRKVTSFVEVPQITEVNTSGGDQQFLTFGFLADDDDRQMPTTKNPISMSFTVADDPDLPYVAVVEAADD DKQARVLRLNLPGGSSIVYNAYVSITTTPTLGRNNLMTRVMTLSLAGRPTRYSALVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22913; Mature: 22782
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFRLPNGATLQIASAYGAAIPVTALSNANPAVATAAAHGLADGDIIAVTSGWTRLNDRA CCEECCCCCEEEEEECCCCEEEEEEECCCCCCEEEHHHCCCCCCCEEEEECCCEECCHHH TRVSKSLSGTFALENINTTNLQPYPAGSGTGSVRKVTSFVEVPQITEVNTSGGDQQFLTF HHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCEEEEE GFLADDDDRQMPTTKNPISMSFTVADDPDLPYVAVVEAADDDKQARVLRLNLPGGSSIVY EEEECCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCEEEEEEECCCCCEEEE NAYVSITTTPTLGRNNLMTRVMTLSLAGRPTRYSALVA EEEEEEEECCCCCCCHHEEEEEEEEECCCCCCEEEEEC >Mature Secondary Structure GFRLPNGATLQIASAYGAAIPVTALSNANPAVATAAAHGLADGDIIAVTSGWTRLNDRA CEECCCCCEEEEEECCCCEEEEEEECCCCCCEEEHHHCCCCCCCEEEEECCCEECCHHH TRVSKSLSGTFALENINTTNLQPYPAGSGTGSVRKVTSFVEVPQITEVNTSGGDQQFLTF HHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCEEEEE GFLADDDDRQMPTTKNPISMSFTVADDPDLPYVAVVEAADDDKQARVLRLNLPGGSSIVY EEEECCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCEEEEEEECCCCCEEEE NAYVSITTTPTLGRNNLMTRVMTLSLAGRPTRYSALVA EEEEEEEECCCCCCCHHEEEEEEEEECCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA