| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66046009
Identifier: 66046009
GI number: 66046009
Start: 3360547
End: 3361158
Strand: Reverse
Name: 66046009
Synonym: Psyr_2773
Alternate gene names: NA
Gene position: 3361158-3360547 (Counterclockwise)
Preceding gene: 66046010
Following gene: 66046008
Centisome position: 55.16
GC content: 47.55
Gene sequence:
>612_bases ATGGAAGCGAACAGTTATTTTAGGGGCGCGAAGAATCATTTGGTGAGAGGTAAAAAGCTTTTCGCTAGAGGGGCACAAAA GCCAGAATACTATTTCTACAGTGCATTGGAACTAAGGTTCGGAATCGAGTCAAGATATCGAGAGTATCTTGAGCATCAAA AAGATGTCACGGCCAAAAAAAAACAAGGATGGCAGATTGCTGCACTTGGTAGAGAGGTGGAGCGGGCATTTGCCGGATGC GTGCAGGAGGTTAACATTAAGATATTCTCTGACGGATTCCCTTTGCTTCTGTGCAAGTACACACCTGTGACACCGGGCCT GAGTGCGATTGGTGAAAGGCTAGGTAATTACCTGCACGCTCCAAAGTCTGATGATCTTCGTGAGCTTCATCAATGGGACG ATCTTGAGAGAATGTTATGGGAAGGCTTCACGCTGCTGGAATATTCCTGCAGCGGAAATCTCCTTGGAGTTCCCATGAGA GCCCCAGGGGGCAAACAGCTTACCTTCAATATGACGGCAGACGAGGATCAGAAGTCGGTTGTAAAGGCGCTATTTGAAAA GGGAAGCGATATTTTGATGGACGTCAGTTACGCCGAGCCTCTCGCGCTATAA
Upstream 100 bases:
>100_bases CAATCTGTATCGGTGAGCGGCGCTGGGGCGGGGCGATCATCTCTGCATCGATCTACGCAGAAGACAAGGTATGATACAGC TTTGACTTTTCGAGAAAAAC
Downstream 100 bases:
>100_bases AAATAAACACTTTCAAACCGCCCACGAGGCGGTTTTTTTATGCCTGGAGAAAAGCATGGGCGCAGCACTGAAGATCGATA TCCGCGGTGAAAAAGGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MEANSYFRGAKNHLVRGKKLFARGAQKPEYYFYSALELRFGIESRYREYLEHQKDVTAKKKQGWQIAALGREVERAFAGC VQEVNIKIFSDGFPLLLCKYTPVTPGLSAIGERLGNYLHAPKSDDLRELHQWDDLERMLWEGFTLLEYSCSGNLLGVPMR APGGKQLTFNMTADEDQKSVVKALFEKGSDILMDVSYAEPLAL
Sequences:
>Translated_203_residues MEANSYFRGAKNHLVRGKKLFARGAQKPEYYFYSALELRFGIESRYREYLEHQKDVTAKKKQGWQIAALGREVERAFAGC VQEVNIKIFSDGFPLLLCKYTPVTPGLSAIGERLGNYLHAPKSDDLRELHQWDDLERMLWEGFTLLEYSCSGNLLGVPMR APGGKQLTFNMTADEDQKSVVKALFEKGSDILMDVSYAEPLAL >Mature_203_residues MEANSYFRGAKNHLVRGKKLFARGAQKPEYYFYSALELRFGIESRYREYLEHQKDVTAKKKQGWQIAALGREVERAFAGC VQEVNIKIFSDGFPLLLCKYTPVTPGLSAIGERLGNYLHAPKSDDLRELHQWDDLERMLWEGFTLLEYSCSGNLLGVPMR APGGKQLTFNMTADEDQKSVVKALFEKGSDILMDVSYAEPLAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23066; Mature: 23066
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEANSYFRGAKNHLVRGKKLFARGAQKPEYYFYSALELRFGIESRYREYLEHQKDVTAKK CCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHH KQGWQIAALGREVERAFAGCVQEVNIKIFSDGFPLLLCKYTPVTPGLSAIGERLGNYLHA HCCCEEEHHHHHHHHHHHHHHHHCCEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHCCC PKSDDLRELHQWDDLERMLWEGFTLLEYSCSGNLLGVPMRAPGGKQLTFNMTADEDQKSV CCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEECCCCCCCEEEEEECCCCHHHHH VKALFEKGSDILMDVSYAEPLAL HHHHHHCCCCEEEEECCCCCCCC >Mature Secondary Structure MEANSYFRGAKNHLVRGKKLFARGAQKPEYYFYSALELRFGIESRYREYLEHQKDVTAKK CCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHH KQGWQIAALGREVERAFAGCVQEVNIKIFSDGFPLLLCKYTPVTPGLSAIGERLGNYLHA HCCCEEEHHHHHHHHHHHHHHHHCCEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHCCC PKSDDLRELHQWDDLERMLWEGFTLLEYSCSGNLLGVPMRAPGGKQLTFNMTADEDQKSV CCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEECCCCCCCEEEEEECCCCHHHHH VKALFEKGSDILMDVSYAEPLAL HHHHHHCCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA