| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66046006
Identifier: 66046006
GI number: 66046006
Start: 3354775
End: 3355878
Strand: Reverse
Name: 66046006
Synonym: Psyr_2770
Alternate gene names: NA
Gene position: 3355878-3354775 (Counterclockwise)
Preceding gene: 66046007
Following gene: 66046005
Centisome position: 55.07
GC content: 56.34
Gene sequence:
>1104_bases ATGCCTTGGTACAAGTCGGGTACGGTTTCCGTCACCCAAAATTCGAATGCGGTCATTGGCACCAATACCGCCTTCATCGC GAACAGCCGGGTAGGTGATGGCTTTCGCGGGCCTGATGGTGGCTGGTATGAGGTGACCAACATCGCCAGCAATACCGCGA TGTCGATCGCGCCGAACTATCAGGGAGTCACCAACAACGCGGGCGGGTACGCGCTTGCTCCGATGCAGGGCTACGTCAAG GATTCTGCTGATGCGCTCCGGGCGCTGGTCAATCAGTTCGGCTCTACCCTTGCGGTGTTGGGCACTTCTGGTACGCGCGA AGGTGTGCGCGCAGCACTTGCTGCTGCCGCCGCCGGGAACAACAGCGACATCCTCTCCCTGTCGGGTCTGACAACGGCGC TGACGATTGAGCAGGGTGGGACCGGCAAGAAGAGTGCTGGCGAAGCCATCCAGGCATTGGGCGGTGTGCGCTTGGGGGCG GCTAATTCTTCCGTTGGGACAAGTCTTTTTTCGGGAGCTCCGCCCGGCATAGCCTCAATAGGCCCCACTAACAATAACGG TAACACGGCGCTACGAATAGGTAATGGCAACAACAATAGCGCATCCGCGGTAATGACATTTATTCGAGATGGGGCGTTTG GTCTTCACCTTGGAGTTGACACCGACAACAAATTCAAGATCGGTGGGTTTTCAATGGGTGAAGTAGCACGGACCTTATAC CACGAGGGTAACGCAGTAGGGACCGTTTCACAGTCGGGAGGCATGCCCACCGGGGCGATAATAGAAACTGGAAATTTGAA TGGGGGCACGTTCACGAAGTATTTGGACGGCACGATGATTTGCCGAGGGATATCGCCAGCCCCAGTGGCGGCTAGCCAGG GCGGTGGACCGATCTTCTACTCAGGCGGCGTTTCTTTCGTATTTCCTGCGCCATTTGCTGCTGTTCCGGCAGTGACGATG CAGGCCATGACTTCTAATGGTTACTTTTGTTGGGGGGCATCCGATGGTAGTGCCACTACTACGGGCATCATCGGTCGAGT TGTTTCCCCGTCGAGTACCGCTTCTTCGTACCTTTGTTATATAGCCGTTGGCAGGTGGTTCTAA
Upstream 100 bases:
>100_bases TACGCGATCACCATTGCAGCGGCCAATCCAACAGCATTCTTTCTGCCGGCTGTCTTTGCAAAGATGAACGTCTGACACAT CAACTGATTGAGTAAACATC
Downstream 100 bases:
>100_bases TGATTATCAAAATAGCTCCCCAGCGACGGGATGATGCATTTGTTGTAGAAAAAAACGGCATGGTATTGAAGATTAATGGA GATACGTTCGACTTTTCGCC
Product: tail fiber domain-containing protein
Products: NA
Alternate protein names: Phage Tail Fiber Protein; Prophage; Phage-Like Protein; Tail Fiber Domain-Containing Protein; Tail Fiber Protein
Number of amino acids: Translated: 367; Mature: 366
Protein sequence:
>367_residues MPWYKSGTVSVTQNSNAVIGTNTAFIANSRVGDGFRGPDGGWYEVTNIASNTAMSIAPNYQGVTNNAGGYALAPMQGYVK DSADALRALVNQFGSTLAVLGTSGTREGVRAALAAAAAGNNSDILSLSGLTTALTIEQGGTGKKSAGEAIQALGGVRLGA ANSSVGTSLFSGAPPGIASIGPTNNNGNTALRIGNGNNNSASAVMTFIRDGAFGLHLGVDTDNKFKIGGFSMGEVARTLY HEGNAVGTVSQSGGMPTGAIIETGNLNGGTFTKYLDGTMICRGISPAPVAASQGGGPIFYSGGVSFVFPAPFAAVPAVTM QAMTSNGYFCWGASDGSATTTGIIGRVVSPSSTASSYLCYIAVGRWF
Sequences:
>Translated_367_residues MPWYKSGTVSVTQNSNAVIGTNTAFIANSRVGDGFRGPDGGWYEVTNIASNTAMSIAPNYQGVTNNAGGYALAPMQGYVK DSADALRALVNQFGSTLAVLGTSGTREGVRAALAAAAAGNNSDILSLSGLTTALTIEQGGTGKKSAGEAIQALGGVRLGA ANSSVGTSLFSGAPPGIASIGPTNNNGNTALRIGNGNNNSASAVMTFIRDGAFGLHLGVDTDNKFKIGGFSMGEVARTLY HEGNAVGTVSQSGGMPTGAIIETGNLNGGTFTKYLDGTMICRGISPAPVAASQGGGPIFYSGGVSFVFPAPFAAVPAVTM QAMTSNGYFCWGASDGSATTTGIIGRVVSPSSTASSYLCYIAVGRWF >Mature_366_residues PWYKSGTVSVTQNSNAVIGTNTAFIANSRVGDGFRGPDGGWYEVTNIASNTAMSIAPNYQGVTNNAGGYALAPMQGYVKD SADALRALVNQFGSTLAVLGTSGTREGVRAALAAAAAGNNSDILSLSGLTTALTIEQGGTGKKSAGEAIQALGGVRLGAA NSSVGTSLFSGAPPGIASIGPTNNNGNTALRIGNGNNNSASAVMTFIRDGAFGLHLGVDTDNKFKIGGFSMGEVARTLYH EGNAVGTVSQSGGMPTGAIIETGNLNGGTFTKYLDGTMICRGISPAPVAASQGGGPIFYSGGVSFVFPAPFAAVPAVTMQ AMTSNGYFCWGASDGSATTTGIIGRVVSPSSTASSYLCYIAVGRWF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36870; Mature: 36739
Theoretical pI: Translated: 8.42; Mature: 8.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPWYKSGTVSVTQNSNAVIGTNTAFIANSRVGDGFRGPDGGWYEVTNIASNTAMSIAPNY CCCCCCCEEEEEECCCEEEECCEEEEECCCCCCCCCCCCCCEEEEEECCCCCEEEECCCC QGVTNNAGGYALAPMQGYVKDSADALRALVNQFGSTLAVLGTSGTREGVRAALAAAAAGN CCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHCCC NSDILSLSGLTTALTIEQGGTGKKSAGEAIQALGGVRLGAANSSVGTSLFSGAPPGIASI CCCEEEECCCEEEEEEECCCCCCHHHHHHHHHHCCEEEECCCCCCCHHHHCCCCCCCCCC GPTNNNGNTALRIGNGNNNSASAVMTFIRDGAFGLHLGVDTDNKFKIGGFSMGEVARTLY CCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCEEEEEECCCCCCEEECCCCHHHHHHHHH HEGNAVGTVSQSGGMPTGAIIETGNLNGGTFTKYLDGTMICRGISPAPVAASQGGGPIFY HCCCEEEEECCCCCCCCCEEEECCCCCCCEEEEECCCEEEEECCCCCCCCCCCCCCEEEE SGGVSFVFPAPFAAVPAVTMQAMTSNGYFCWGASDGSATTTGIIGRVVSPSSTASSYLCY ECCEEEEECCCHHHHHHHHHEEECCCCEEEEECCCCCCCHHHHEEEEECCCCCCCCEEEE IAVGRWF EEEECCC >Mature Secondary Structure PWYKSGTVSVTQNSNAVIGTNTAFIANSRVGDGFRGPDGGWYEVTNIASNTAMSIAPNY CCCCCCEEEEEECCCEEEECCEEEEECCCCCCCCCCCCCCEEEEEECCCCCEEEECCCC QGVTNNAGGYALAPMQGYVKDSADALRALVNQFGSTLAVLGTSGTREGVRAALAAAAAGN CCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHCCC NSDILSLSGLTTALTIEQGGTGKKSAGEAIQALGGVRLGAANSSVGTSLFSGAPPGIASI CCCEEEECCCEEEEEEECCCCCCHHHHHHHHHHCCEEEECCCCCCCHHHHCCCCCCCCCC GPTNNNGNTALRIGNGNNNSASAVMTFIRDGAFGLHLGVDTDNKFKIGGFSMGEVARTLY CCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCEEEEEECCCCCCEEECCCCHHHHHHHHH HEGNAVGTVSQSGGMPTGAIIETGNLNGGTFTKYLDGTMICRGISPAPVAASQGGGPIFY HCCCEEEEECCCCCCCCCEEEECCCCCCCEEEEECCCEEEEECCCCCCCCCCCCCCEEEE SGGVSFVFPAPFAAVPAVTMQAMTSNGYFCWGASDGSATTTGIIGRVVSPSSTASSYLCY ECCEEEEECCCHHHHHHHHHEEECCCCEEEEECCCCCCCHHHHEEEEECCCCCCCCEEEE IAVGRWF EEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA